RNA–Protein interactions for RNA: ENST00000505732.5

TTC39B-204, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 1,881 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-204ENST00000505732 KSR2Q6VAB6 950 aa25.9■■□□□ 1.74
TTC39B-204ENST00000505732 LRRCC1Q9C099 1032 aa25.9■■□□□ 1.74
TTC39B-204ENST00000505732 DDX21Q9NR30 783 aaKnown RBP eCLIP25.9■■□□□ 1.74
TTC39B-204ENST00000505732 PDIA6Q15084 440 aa25.89■■□□□ 1.73
TTC39B-204ENST00000505732 RTL5Q5HYW3 569 aaPredicted RBP25.89■■□□□ 1.73
TTC39B-204ENST00000505732 SSH3Q8TE77 659 aa25.89■■□□□ 1.73
TTC39B-204ENST00000505732 IBTKQ9P2D0 1353 aaPredicted RBP25.88■■□□□ 1.73
TTC39B-204ENST00000505732 OSBPL3Q9H4L5 887 aa25.88■■□□□ 1.73
TTC39B-204ENST00000505732 SDSP20132 328 aa25.87■■□□□ 1.73
TTC39B-204ENST00000505732 PPP1R42Q7Z4L9 355 aa25.87■■□□□ 1.73
TTC39B-204ENST00000505732 ZNF496Q96IT1 587 aaPredicted RBP25.87■■□□□ 1.73
TTC39B-204ENST00000505732 PDE1AP54750 535 aa25.87■■□□□ 1.73
TTC39B-204ENST00000505732 PKD1L3Q7Z443 1732 aa25.86■■□□□ 1.73
TTC39B-204ENST00000505732 COL5A2P05997 1499 aaPredicted RBP25.86■■□□□ 1.73
TTC39B-204ENST00000505732 CABP4P57796 275 aa25.85■■□□□ 1.73
TTC39B-204ENST00000505732 POLA2Q14181 598 aa25.85■■□□□ 1.73
TTC39B-204ENST00000505732 TTC5Q8N0Z6 440 aa25.85■■□□□ 1.73
TTC39B-204ENST00000505732 ALDH1L1O75891 902 aa25.85■■□□□ 1.73
TTC39B-204ENST00000505732 AIMP1Q12904 312 aaKnown RBP25.85■■□□□ 1.73
TTC39B-204ENST00000505732 MRC1P22897 1456 aa25.85■■□□□ 1.73
TTC39B-204ENST00000505732 DDX58O95786 925 aaKnown RBP25.84■■□□□ 1.73
TTC39B-204ENST00000505732 ZCRB1Q8TBF4 217 aaKnown RBP25.84■■□□□ 1.73
TTC39B-204ENST00000505732 USP35Q9P2H5 1018 aa25.84■■□□□ 1.73
TTC39B-204ENST00000505732 SALL3Q9BXA9 1300 aa25.83■■□□□ 1.73
TTC39B-204ENST00000505732 SRGAP3O43295 1099 aa25.83■■□□□ 1.72
TTC39B-204ENST00000505732 SNRPA1P09661 255 aaKnown RBP25.83■■□□□ 1.72
TTC39B-204ENST00000505732 CARD10Q9BWT7 1032 aa25.83■■□□□ 1.72
TTC39B-204ENST00000505732 FMNL2Q96PY5 1086 aa25.82■■□□□ 1.72
TTC39B-204ENST00000505732 USP16Q9Y5T5 823 aa25.82■■□□□ 1.72
TTC39B-204ENST00000505732 PCDH11XQ9BZA7 1347 aa25.81■■□□□ 1.72
TTC39B-204ENST00000505732 PCDH11YQ9BZA8 1340 aa25.81■■□□□ 1.72
TTC39B-204ENST00000505732 EIF5BO60841 1220 aaKnown RBP25.81■■□□□ 1.72
TTC39B-204ENST00000505732 SURF6O75683 361 aaKnown RBP25.81■■□□□ 1.72
TTC39B-204ENST00000505732 MYL6BP14649 208 aa25.81■■□□□ 1.72
TTC39B-204ENST00000505732 CWF19L2Q2TBE0 894 aaKnown RBP25.81■■□□□ 1.72
TTC39B-204ENST00000505732 STRN4Q9NRL3 753 aa25.81■■□□□ 1.72
TTC39B-204ENST00000505732 C9orf78Q9NZ63 289 aaPredicted RBP25.81■■□□□ 1.72
TTC39B-204ENST00000505732 NFKBIBQ15653 356 aa25.81■■□□□ 1.72
TTC39B-204ENST00000505732 LINS1Q8NG48 757 aa25.81■■□□□ 1.72
TTC39B-204ENST00000505732 RAB11FIP3O75154 756 aa25.8■■□□□ 1.72
TTC39B-204ENST00000505732 EVA1CP58658 441 aa25.8■■□□□ 1.72
TTC39B-204ENST00000505732 LARP1Q6PKG0 1096 aaKnown RBP25.8■■□□□ 1.72
TTC39B-204ENST00000505732 KIF2CQ99661 725 aa25.8■■□□□ 1.72
TTC39B-204ENST00000505732 SLKQ9H2G2 1235 aaPredicted RBP25.8■■□□□ 1.72
TTC39B-204ENST00000505732 IL2RBP14784 551 aa25.79■■□□□ 1.72
TTC39B-204ENST00000505732 MX1P20591 662 aa25.79■■□□□ 1.72
TTC39B-204ENST00000505732 TSHZ3Q63HK5 1081 aa25.79■■□□□ 1.72
TTC39B-204ENST00000505732 RIC3Q7Z5B4 369 aa25.79■■□□□ 1.72
TTC39B-204ENST00000505732 C5P01031 1676 aa25.78■■□□□ 1.72
TTC39B-204ENST00000505732 CASC1Q6TDU7 716 aa25.78■■□□□ 1.72
TTC39B-204ENST00000505732 XAGE3Q8WTP9 111 aa25.78■■□□□ 1.72
TTC39B-204ENST00000505732 COPS6Q7L5N1 327 aa25.77■■□□□ 1.72
TTC39B-204ENST00000505732 IL1RAPL2Q9NP60 686 aa25.77■■□□□ 1.72
TTC39B-204ENST00000505732 NHSL1Q5SYE7 1610 aa25.77■■□□□ 1.72
TTC39B-204ENST00000505732 ABCA3Q99758 1704 aa25.77■■□□□ 1.72
TTC39B-204ENST00000505732 ANTXR1Q9H6X2 564 aa25.77■■□□□ 1.72
TTC39B-204ENST00000505732 STAP2Q9UGK3 403 aa25.77■■□□□ 1.72
TTC39B-204ENST00000505732 MTX1Q13505 466 aa25.76■■□□□ 1.71
TTC39B-204ENST00000505732 RHPN1Q8TCX5 695 aa25.76■■□□□ 1.71
TTC39B-204ENST00000505732 HDAC5Q9UQL6 1122 aa25.76■■□□□ 1.71
TTC39B-204ENST00000505732 PARP4Q9UKK3 1724 aaKnown RBP25.75■■□□□ 1.71
TTC39B-204ENST00000505732 LRP10Q7Z4F1 713 aa25.75■■□□□ 1.71
TTC39B-204ENST00000505732 HSCBQ8IWL3 235 aa25.75■■□□□ 1.71
TTC39B-204ENST00000505732 ERVV-2B6SEH9 535 aa25.74■■□□□ 1.71
TTC39B-204ENST00000505732 GRM8O00222 908 aa25.74■■□□□ 1.71
TTC39B-204ENST00000505732 NKX1-1Q15270 411 aaPredicted RBP25.74■■□□□ 1.71
TTC39B-204ENST00000505732 SNX21Q969T3 373 aa25.74■■□□□ 1.71
TTC39B-204ENST00000505732 IGKV5-2P06315 115 aa25.74■■□□□ 1.71
TTC39B-204ENST00000505732 SPRYD3Q8NCJ5 442 aa25.74■■□□□ 1.71
TTC39B-204ENST00000505732 DDX54Q8TDD1 881 aaKnown RBP25.74■■□□□ 1.71
TTC39B-204ENST00000505732 KIF1BPQ96EK5 621 aa25.74■■□□□ 1.71
TTC39B-204ENST00000505732 UTYO14607 1347 aa25.74■■□□□ 1.71
TTC39B-204ENST00000505732 PIP4K2AP48426 406 aaPredicted RBP25.73■■□□□ 1.71
TTC39B-204ENST00000505732 USP26Q9BXU7 913 aa25.73■■□□□ 1.71
TTC39B-204ENST00000505732 HSP90AB4PQ58FF6 505 aa25.72■■□□□ 1.71
TTC39B-204ENST00000505732 NEXNQ0ZGT2 675 aa25.72■■□□□ 1.71
TTC39B-204ENST00000505732 ANKRD13DQ6ZTN6 518 aa25.71■■□□□ 1.71
TTC39B-204ENST00000505732 NUTM1Q86Y26 1132 aa25.71■■□□□ 1.71
TTC39B-204ENST00000505732 METTL22Q9BUU2 404 aaPredicted RBP25.71■■□□□ 1.71
TTC39B-204ENST00000505732 SUCLG2Q96I99 432 aa25.7■■□□□ 1.71
TTC39B-204ENST00000505732 NEURL1BA8MQ27 555 aa25.7■■□□□ 1.7
TTC39B-204ENST00000505732 KAZALD1Q96I82 304 aa25.7■■□□□ 1.7
TTC39B-204ENST00000505732 MYD88Q99836 296 aa25.7■■□□□ 1.7
TTC39B-204ENST00000505732 AOX1Q06278 1338 aa25.7■■□□□ 1.7
TTC39B-204ENST00000505732 FRAT2O75474 233 aaPredicted RBP25.68■■□□□ 1.7
TTC39B-204ENST00000505732 RBM42Q9BTD8 480 aaKnown RBP25.68■■□□□ 1.7
TTC39B-204ENST00000505732 BTG4Q9NY30 223 aa25.68■■□□□ 1.7
TTC39B-204ENST00000505732 ERC2O15083 957 aa25.68■■□□□ 1.7
TTC39B-204ENST00000505732 TRIM6-TRIM34B2RNG4 842 aa25.67■■□□□ 1.7
TTC39B-204ENST00000505732 REC8O95072 547 aa25.67■■□□□ 1.7
TTC39B-204ENST00000505732 OS9Q13438 667 aaPredicted RBP25.67■■□□□ 1.7
TTC39B-204ENST00000505732 GCKRQ14397 625 aa25.67■■□□□ 1.7
TTC39B-204ENST00000505732 RILPL2Q969X0 211 aa25.67■■□□□ 1.7
TTC39B-204ENST00000505732 BICC1Q9H694 974 aaKnown RBP25.67■■□□□ 1.7
TTC39B-204ENST00000505732 PA2G4Q9UQ80 394 aaKnown RBP25.66■■□□□ 1.7
TTC39B-204ENST00000505732 GLI3P10071 1580 aa25.65■■□□□ 1.7
TTC39B-204ENST00000505732 CD2BP2O95400 341 aaKnown RBP25.64■■□□□ 1.7
TTC39B-204ENST00000505732 UNC5CLQ8IV45 518 aa25.64■■□□□ 1.7
TTC39B-204ENST00000505732 DEKP35659 375 aaKnown RBP25.64■■□□□ 1.69
TTC39B-204ENST00000505732 PI4K2BQ8TCG2 481 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms