RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 SGIP1Q9BQI5 828 aa7.8□□□□□ -1.16
SPOP-208ENST00000504889 MIS18AQ9NYP9 233 aa7.8□□□□□ -1.16
SPOP-208ENST00000504889 WWC3Q9ULE0 1092 aa7.8□□□□□ -1.16
SPOP-208ENST00000504889 ZBTB1Q9Y2K1 713 aa7.8□□□□□ -1.16
SPOP-208ENST00000504889 COL15A1P39059 1388 aa7.8□□□□□ -1.16
SPOP-208ENST00000504889 CEMIPQ8WUJ3 1361 aa7.8□□□□□ -1.16
SPOP-208ENST00000504889 HEG1Q9ULI3 1381 aa7.8□□□□□ -1.16
SPOP-208ENST00000504889 CYP19A1P11511 503 aaPredicted RBP7.79□□□□□ -1.16
SPOP-208ENST00000504889 USPL1Q5W0Q7 1092 aa7.79□□□□□ -1.16
SPOP-208ENST00000504889 RUNDC1Q96C34 613 aa7.79□□□□□ -1.16
SPOP-208ENST00000504889 PLEKHF1Q96S99 279 aa7.79□□□□□ -1.16
SPOP-208ENST00000504889 THUMPD2Q9BTF0 503 aaKnown RBP7.79□□□□□ -1.16
SPOP-208ENST00000504889 SRP68Q9UHB9 627 aaKnown RBP7.79□□□□□ -1.16
SPOP-208ENST00000504889 TSPYL4Q9UJ04 414 aa7.79□□□□□ -1.16
SPOP-208ENST00000504889 SIPA1L3O60292 1781 aaPredicted RBP7.79□□□□□ -1.16
SPOP-208ENST00000504889 UBR2Q8IWV8 1755 aa7.79□□□□□ -1.16
SPOP-208ENST00000504889 C4AP0C0L4 1744 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 A0A087WZG4 1122 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 KCNQ3O43525 872 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
SPOP-208ENST00000504889 GYS1P13807 737 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
SPOP-208ENST00000504889 INTS5Q6P9B9 1019 aaKnown RBP7.78□□□□□ -1.16
SPOP-208ENST00000504889 BICDL1Q6ZP65 573 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 NLGN2Q8NFZ4 835 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 MRS2Q9HD23 443 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 ADAMTS8Q9UP79 889 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 DLG5Q8TDM6 1919 aa7.78□□□□□ -1.16
SPOP-208ENST00000504889 CICQ96RK0 1608 aaPredicted RBP7.78□□□□□ -1.16
SPOP-208ENST00000504889 USP42Q9H9J4 1324 aaKnown RBP7.78□□□□□ -1.16
SPOP-208ENST00000504889 YY1P25490 414 aa7.77□□□□□ -1.17
SPOP-208ENST00000504889 PIP4K2AP48426 406 aaPredicted RBP7.77□□□□□ -1.17
SPOP-208ENST00000504889 NGEFQ8N5V2 710 aa7.77□□□□□ -1.17
SPOP-208ENST00000504889 CD2APQ9Y5K6 639 aa7.77□□□□□ -1.17
SPOP-208ENST00000504889 SOS1Q07889 1333 aaPredicted RBP7.77□□□□□ -1.17
SPOP-208ENST00000504889 SENP3-EIF4A1A0A087X0R7 540 aa7.76□□□□□ -1.17
SPOP-208ENST00000504889 PRAMEF22A3QJZ6 481 aa7.76□□□□□ -1.17
SPOP-208ENST00000504889 A1BGP04217 495 aa7.76□□□□□ -1.17
SPOP-208ENST00000504889 FKBP8Q14318 412 aa7.76□□□□□ -1.17
SPOP-208ENST00000504889 DZIP3Q86Y13 1208 aaKnown RBP7.76□□□□□ -1.17
SPOP-208ENST00000504889 NARFQ9UHQ1 456 aa7.76□□□□□ -1.17
SPOP-208ENST00000504889 TBC1D2BQ9UPU7 963 aa7.76□□□□□ -1.17
SPOP-208ENST00000504889 USP16Q9Y5T5 823 aa7.76□□□□□ -1.17
SPOP-208ENST00000504889 COL24A1Q17RW2 1714 aa7.75□□□□□ -1.17
SPOP-208ENST00000504889 MYL6BP14649 208 aa7.75□□□□□ -1.17
SPOP-208ENST00000504889 EIF2S2P20042 333 aaKnown RBP7.75□□□□□ -1.17
SPOP-208ENST00000504889 IL6STP40189 918 aaPredicted RBP7.75□□□□□ -1.17
SPOP-208ENST00000504889 CALD1Q05682 793 aaKnown RBP7.75□□□□□ -1.17
SPOP-208ENST00000504889 ZNF652Q9Y2D9 606 aa7.75□□□□□ -1.17
SPOP-208ENST00000504889 MYH14Q7Z406 1995 aaKnown RBP7.74□□□□□ -1.17
SPOP-208ENST00000504889 APAF1O14727 1248 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 GRIN3BO60391 1043 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 KIF6Q6ZMV9 814 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 FAM9BQ8IZU0 186 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 NECTIN2Q92692 538 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 BCS1LQ9Y276 419 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 LAMB4A4D0S4 1761 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 KDM3BQ7LBC6 1761 aa7.74□□□□□ -1.17
SPOP-208ENST00000504889 A0A0G2JLW4 131 aa7.73□□□□□ -1.17
SPOP-208ENST00000504889 FAM177BA6PVY3 158 aa7.73□□□□□ -1.17
SPOP-208ENST00000504889 SERPINB2P05120 415 aa7.73□□□□□ -1.17
SPOP-208ENST00000504889 GTF2E1P29083 439 aaPredicted RBP7.73□□□□□ -1.17
SPOP-208ENST00000504889 EIF5P55010 431 aaKnown RBP7.73□□□□□ -1.17
SPOP-208ENST00000504889 EIF4A1P60842 406 aaKnown RBP7.73□□□□□ -1.17
SPOP-208ENST00000504889 TGFB2P61812 414 aa7.73□□□□□ -1.17
SPOP-208ENST00000504889 PIAS4Q8N2W9 510 aaPredicted RBP7.73□□□□□ -1.17
SPOP-208ENST00000504889 SETDB2Q96T68 719 aa7.73□□□□□ -1.17
SPOP-208ENST00000504889 SALL2Q9Y467 1007 aaPredicted RBP7.73□□□□□ -1.17
SPOP-208ENST00000504889 SCN7AQ01118 1682 aa7.73□□□□□ -1.17
SPOP-208ENST00000504889 CARMIL3Q8ND23 1372 aa7.72□□□□□ -1.17
SPOP-208ENST00000504889 C10orf71Q711Q0 1435 aa7.72□□□□□ -1.17
SPOP-208ENST00000504889 POLRMTO00411 1230 aaKnown RBP7.72□□□□□ -1.17
SPOP-208ENST00000504889 GIGYF1O75420 1035 aaPredicted RBP7.72□□□□□ -1.17
SPOP-208ENST00000504889 ST5P78524 1137 aa7.72□□□□□ -1.17
SPOP-208ENST00000504889 DDR1Q08345 913 aa7.72□□□□□ -1.17
SPOP-208ENST00000504889 NFIXQ14938 502 aa7.72□□□□□ -1.17
SPOP-208ENST00000504889 CCDC184Q52MB2 194 aa7.72□□□□□ -1.17
SPOP-208ENST00000504889 TBC1D9BQ66K14 1250 aa7.72□□□□□ -1.17
SPOP-208ENST00000504889 DPEP1P16444 411 aa7.71□□□□□ -1.18
SPOP-208ENST00000504889 YBX3P16989 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
SPOP-208ENST00000504889 AIMP1Q12904 312 aaKnown RBP7.71□□□□□ -1.18
SPOP-208ENST00000504889 NBPF5PQ86XG9 351 aaPredicted RBP7.71□□□□□ -1.18
SPOP-208ENST00000504889 CCDC24Q8N4L8 307 aa7.71□□□□□ -1.18
SPOP-208ENST00000504889 CNBD1Q8NA66 436 aa7.71□□□□□ -1.18
SPOP-208ENST00000504889 ZBTB3Q9H5J0 574 aa7.71□□□□□ -1.18
SPOP-208ENST00000504889 BABAM1Q9NWV8 329 aa7.71□□□□□ -1.18
SPOP-208ENST00000504889 TRIM35Q9UPQ4 493 aa7.71□□□□□ -1.18
SPOP-208ENST00000504889 NIP7Q9Y221 180 aaKnown RBP eCLIP7.71□□□□□ -1.18
SPOP-208ENST00000504889 N4BP2Q86UW6 1770 aaPredicted RBP7.71□□□□□ -1.18
SPOP-208ENST00000504889 GOLGB1Q14789 3259 aaKnown RBP7.7□□□□□ -1.18
SPOP-208ENST00000504889 UTRNP46939 3433 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 PXDNLA1KZ92 1463 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 H0YIN7 160 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 CAMTA2O94983 1202 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 TM4SF1P30408 202 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 CHRNA5P30532 468 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 GNAI1P63096 354 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 HDGFL1Q5TGJ6 251 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 ARHGAP27Q6ZUM4 889 aa7.7□□□□□ -1.18
SPOP-208ENST00000504889 C2CD5Q86YS7 1000 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms