RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 POLD1P28340 1107 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 CYP2C19P33261 490 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 MRE11P49959 708 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 HNRNPH2P55795 449 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 XPCQ01831 940 aaPredicted RBP4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 SF3A1Q15459 793 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 YIPF2Q9BWQ6 316 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 IGSF5Q9NSI5 407 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 RSPH14Q9UHP6 348 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 MTMR7Q9Y216 660 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 RPGRIP1LQ68CZ1 1315 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 NPHP1O15259 732 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 PKN1Q16512 942 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 AMOTQ4VCS5 1084 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 C20orf194Q5TEA3 1177 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 THEMISQ8N1K5 641 aaPredicted RBP4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 SHPRHQ149N8 1683 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 NCKAP5LQ9HCH0 1330 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 ASXL1Q8IXJ9 1541 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 KIF1CO43896 1103 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 RTN2O75298 545 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 HDGFP51858 240 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 IDI1Q13907 227 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 RASA3Q14644 834 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 CCDC125Q86Z20 511 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 TIGD1Q96MW7 591 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 MTA3Q9BTC8 594 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 BCL2L12Q9HB09 334 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 ST7Q9NRC1 585 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 DDX41Q9UJV9 622 aaKnown RBP4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 RIMS2Q9UQ26 1411 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 AHDC1Q5TGY3 1603 aaPredicted RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 ADGRB2O60241 1585 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 EME2A4GXA9 379 aaPredicted RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 SEC24BO95487 1268 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 SLC5A9Q2M3M2 681 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 TBC1D5Q92609 795 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 UBXN6Q9BZV1 441 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 PRKRIP1Q9H875 184 aaPredicted RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 GOLGA6L6A8MZA4 724 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 APAF1O14727 1248 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 GABPB1Q06547 395 aaPredicted RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 GNL2Q13823 731 aaKnown RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 SART3Q15020 963 aaKnown RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 RC3H1Q5TC82 1133 aaKnown RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 ANKRD45Q5TZF3 282 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 POTEDQ86YR6 584 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 CCAR2Q8N163 923 aaKnown RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 MSL3Q8N5Y2 521 aaKnown RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 TBC1D22AQ8WUA7 517 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 SUGT1Q9Y2Z0 365 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 KTN1Q86UP2 1357 aaKnown RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 CAND2O75155 1236 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 TGFB3P10600 412 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 LTV1Q96GA3 475 aaPredicted RBP4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 BRMS1Q9HCU9 246 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 LMCD1Q9NZU5 365 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 NUB1Q9Y5A7 615 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 PAXBP1Q9Y5B6 917 aa4.42□□□□□ -1.7
PCDH11X-208ENST00000504220 ROBO1Q9Y6N7 1651 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 DCCP43146 1447 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 ANKRD18BA2A2Z9 1011 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 MYBL2P10244 700 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 HOXA10P31260 410 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 GRIK3Q13003 919 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 BIRC2Q13490 618 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 STK24Q9Y6E0 443 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 PLEKHG2Q9H7P9 1386 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 COL16A1Q07092 1604 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 CCDC144AA2RUR9 1427 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 TECPR2O15040 1411 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 PTCH1Q13635 1447 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 PTK7Q13308 1070 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 TSNAXIP1Q2TAA8 658 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 CFAP70Q5T0N1 1121 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 RNF214Q8ND24 703 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 FBXW7Q969H0 707 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 RILPL2Q969X0 211 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 THOC1Q96FV9 657 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 FAM210AQ96ND0 272 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 KIF2CQ99661 725 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 BLOC1S6Q9UL45 172 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 AATKQ6ZMQ8 1374 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 FMN2Q9NZ56 1722 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 CDC42BPGQ6DT37 1551 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 COL22A1Q8NFW1 1626 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 PTMSP20962 102 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 CCDC15Q0P6D6 951 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 FOXD4Q12950 439 aaPredicted RBP4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 CSPP1Q1MSJ5 1256 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 FAM161AQ3B820 660 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 ARMC3Q5W041 872 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 SASS6Q6UVJ0 657 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 ANKLE2Q86XL3 938 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 RTF1Q92541 710 aaKnown RBP4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 CDCA7LQ96GN5 454 aa4.41□□□□□ -1.7
PCDH11X-208ENST00000504220 CTAGE5O15320 804 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 C21orf2O43822 256 aa4.4□□□□□ -1.7
PCDH11X-208ENST00000504220 ATP2B1P20020 1258 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms