RNA–Protein interactions for RNA: ENST00000504211.5

UBE2D3-217, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-217ENST00000504211 LGR5O75473 907 aa11.17□□□□□ -0.62
UBE2D3-217ENST00000504211 ZDHHC1Q8WTX9 485 aa11.17□□□□□ -0.62
UBE2D3-217ENST00000504211 EML1O00423 815 aa11.16□□□□□ -0.62
UBE2D3-217ENST00000504211 RHOQP17081 205 aa11.16□□□□□ -0.62
UBE2D3-217ENST00000504211 ATP2B4P23634 1241 aa11.16□□□□□ -0.62
UBE2D3-217ENST00000504211 PRIMPOLQ96LW4 560 aa11.16□□□□□ -0.62
UBE2D3-217ENST00000504211 C2orf49Q9BVC5 232 aaPredicted RBP11.16□□□□□ -0.62
UBE2D3-217ENST00000504211 TRAIPQ9BWF2 469 aa11.16□□□□□ -0.62
UBE2D3-217ENST00000504211 CABP1Q9NZU7 370 aa11.16□□□□□ -0.62
UBE2D3-217ENST00000504211 SENP3-EIF4A1A0A087X0R7 540 aa11.15□□□□□ -0.62
UBE2D3-217ENST00000504211 SSFA2P28290 1259 aa11.15□□□□□ -0.62
UBE2D3-217ENST00000504211 NOS2P35228 1153 aa11.15□□□□□ -0.62
UBE2D3-217ENST00000504211 PLA2G4AP47712 749 aa11.15□□□□□ -0.62
UBE2D3-217ENST00000504211 C1orf216Q8TAB5 229 aa11.15□□□□□ -0.62
UBE2D3-217ENST00000504211 SERTM1A2A2V5 107 aa11.14□□□□□ -0.63
UBE2D3-217ENST00000504211 PTSQ03393 145 aa11.14□□□□□ -0.63
UBE2D3-217ENST00000504211 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
UBE2D3-217ENST00000504211 HOMEZQ8IX15 550 aa11.14□□□□□ -0.63
UBE2D3-217ENST00000504211 L3MBTL2Q969R5 705 aa11.14□□□□□ -0.63
UBE2D3-217ENST00000504211 CHMP3Q9Y3E7 222 aa11.14□□□□□ -0.63
UBE2D3-217ENST00000504211 A0A1B0GTH6 734 aa11.13□□□□□ -0.63
UBE2D3-217ENST00000504211 SLC35F4A4IF30 521 aa11.13□□□□□ -0.63
UBE2D3-217ENST00000504211 B4GALNT3Q6L9W6 998 aa11.13□□□□□ -0.63
UBE2D3-217ENST00000504211 PHLDB3Q6NSJ2 640 aa11.13□□□□□ -0.63
UBE2D3-217ENST00000504211 TIMMDC1Q9NPL8 285 aa11.13□□□□□ -0.63
UBE2D3-217ENST00000504211 ZDHHC3Q9NYG2 299 aa11.13□□□□□ -0.63
UBE2D3-217ENST00000504211 DYRK1BQ9Y463 629 aa11.13□□□□□ -0.63
UBE2D3-217ENST00000504211 PHKA2P46019 1235 aa11.12□□□□□ -0.63
UBE2D3-217ENST00000504211 COL26A1Q96A83 441 aa11.12□□□□□ -0.63
UBE2D3-217ENST00000504211 SH3PXD2AQ5TCZ1 1133 aa11.11□□□□□ -0.63
UBE2D3-217ENST00000504211 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
UBE2D3-217ENST00000504211 ATP4AP20648 1035 aa11.1□□□□□ -0.63
UBE2D3-217ENST00000504211 NBPF1Q3BBV0 1214 aa11.1□□□□□ -0.63
UBE2D3-217ENST00000504211 PARP3Q9Y6F1 533 aa11.1□□□□□ -0.63
UBE2D3-217ENST00000504211 C1orf53Q5VUE5 145 aa11.09□□□□□ -0.63
UBE2D3-217ENST00000504211 ZNF787Q6DD87 383 aa11.09□□□□□ -0.63
UBE2D3-217ENST00000504211 ZNF232Q9UNY5 417 aa11.09□□□□□ -0.63
UBE2D3-217ENST00000504211 MSX1P28360 303 aa11.08□□□□□ -0.64
UBE2D3-217ENST00000504211 TXLNAP40222 546 aa11.08□□□□□ -0.64
UBE2D3-217ENST00000504211 CCDC155Q8N6L0 562 aa11.08□□□□□ -0.64
UBE2D3-217ENST00000504211 PTCD1O75127 700 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-217ENST00000504211 BRD1O95696 1058 aa11.07□□□□□ -0.64
UBE2D3-217ENST00000504211 PDIA4P13667 645 aaKnown RBP11.07□□□□□ -0.64
UBE2D3-217ENST00000504211 GPC6Q9Y625 555 aaPredicted RBP11.07□□□□□ -0.64
UBE2D3-217ENST00000504211 F11P03951 625 aa11.06□□□□□ -0.64
UBE2D3-217ENST00000504211 TATP17735 454 aaPredicted RBP11.06□□□□□ -0.64
UBE2D3-217ENST00000504211 C7orf43Q8WVR3 580 aa11.06□□□□□ -0.64
UBE2D3-217ENST00000504211 VTI1AQ96AJ9 217 aa11.06□□□□□ -0.64
UBE2D3-217ENST00000504211 PHACTR1Q9C0D0 580 aa11.06□□□□□ -0.64
UBE2D3-217ENST00000504211 ALDH16A1Q8IZ83 802 aa11.05□□□□□ -0.64
UBE2D3-217ENST00000504211 AIDAQ96BJ3 306 aa11.05□□□□□ -0.64
UBE2D3-217ENST00000504211 MYO19Q96H55 970 aa11.05□□□□□ -0.64
UBE2D3-217ENST00000504211 CRISPLD1Q9H336 500 aa11.05□□□□□ -0.64
UBE2D3-217ENST00000504211 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.646e-7■■■■■ 62.1
UBE2D3-217ENST00000504211 RTN1Q16799 776 aa11.04□□□□□ -0.64
UBE2D3-217ENST00000504211 MKNK1Q9BUB5 465 aa11.04□□□□□ -0.64
UBE2D3-217ENST00000504211 QTRT2Q9H974 415 aaKnown RBP11.04□□□□□ -0.64
UBE2D3-217ENST00000504211 HCN4Q9Y3Q4 1203 aa11.04□□□□□ -0.64
UBE2D3-217ENST00000504211 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
UBE2D3-217ENST00000504211 CAPN12Q6ZSI9 719 aa11.03□□□□□ -0.64
UBE2D3-217ENST00000504211 ITGA6P23229 1130 aa11.02□□□□□ -0.65
UBE2D3-217ENST00000504211 LBRQ14739 615 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-217ENST00000504211 NPAS3Q8IXF0 933 aa11.02□□□□□ -0.65
UBE2D3-217ENST00000504211 GAS2L1Q99501 681 aaPredicted RBP11.02□□□□□ -0.65
UBE2D3-217ENST00000504211 GPAMQ9HCL2 828 aa11.02□□□□□ -0.65
UBE2D3-217ENST00000504211 NXF1Q9UBU9 619 aaKnown RBP11.02□□□□□ -0.65
UBE2D3-217ENST00000504211 SCNN1AP37088 669 aa11.01□□□□□ -0.65
UBE2D3-217ENST00000504211 GMCL1Q96IK5 515 aa11.01□□□□□ -0.65
UBE2D3-217ENST00000504211 NGLY1Q96IV0 654 aa11.01□□□□□ -0.65
UBE2D3-217ENST00000504211 CUEDC1Q9NWM3 386 aaPredicted RBP11.01□□□□□ -0.65
UBE2D3-217ENST00000504211 TXNDC2Q86VQ3 553 aa11□□□□□ -0.65
UBE2D3-217ENST00000504211 TRIM22Q8IYM9 498 aa11□□□□□ -0.65
UBE2D3-217ENST00000504211 RHPN1Q8TCX5 695 aa11□□□□□ -0.65
UBE2D3-217ENST00000504211 ZIC5Q96T25 663 aa11□□□□□ -0.65
UBE2D3-217ENST00000504211 RUBCNLQ9H714 662 aa11□□□□□ -0.65
UBE2D3-217ENST00000504211 SEPT3Q9UH03 358 aa11□□□□□ -0.65
UBE2D3-217ENST00000504211 MTMR7Q9Y216 660 aa11□□□□□ -0.65
UBE2D3-217ENST00000504211 H7C1W4 665 aa10.99□□□□□ -0.65
UBE2D3-217ENST00000504211 THBS1P07996 1170 aa10.99□□□□□ -0.65
UBE2D3-217ENST00000504211 ARID4AP29374 1257 aaPredicted RBP10.99□□□□□ -0.65
UBE2D3-217ENST00000504211 KCNA1Q09470 495 aa10.99□□□□□ -0.65
UBE2D3-217ENST00000504211 C16orf46Q6P387 395 aa10.99□□□□□ -0.65
UBE2D3-217ENST00000504211 NLRP8Q86W28 1048 aa10.99□□□□□ -0.65
UBE2D3-217ENST00000504211 PGBD3Q8N328 593 aa10.99□□□□□ -0.65
UBE2D3-217ENST00000504211 H3BM21 787 aa10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 HIF1AQ16665 826 aa10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 ARSJQ5FYB0 599 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 COX20Q5RI15 118 aa10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 BICDL1Q6ZP65 573 aa10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 RIPOR1Q6ZS17 1223 aa10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 NANOS1Q8WY41 292 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 GNEQ9Y223 722 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-217ENST00000504211 A0A1W2PNR3 127 aa10.97□□□□□ -0.65
UBE2D3-217ENST00000504211 UBAP2LQ14157 1087 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-217ENST00000504211 DBN1Q16643 649 aa10.97□□□□□ -0.65
UBE2D3-217ENST00000504211 EFHC2Q5JST6 749 aa10.97□□□□□ -0.65
UBE2D3-217ENST00000504211 KCTD17Q8N5Z5 321 aa10.97□□□□□ -0.65
UBE2D3-217ENST00000504211 KLRG1Q96E93 195 aa10.97□□□□□ -0.65
UBE2D3-217ENST00000504211 ZNF837Q96EG3 531 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-217ENST00000504211 SAP130Q9H0E3 1048 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms