RNA–Protein interactions for RNA: ENST00000504045.5

MATR3-208, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-208ENST00000504045 N4BP2Q86UW6 1770 aaPredicted RBP22.39■■□□□ 1.18
MATR3-208ENST00000504045 FMNL2Q96PY5 1086 aa22.39■■□□□ 1.17
MATR3-208ENST00000504045 AFDNP55196 1824 aaKnown RBP22.38■■□□□ 1.17
MATR3-208ENST00000504045 COL15A1P39059 1388 aa22.38■■□□□ 1.17
MATR3-208ENST00000504045 NLGN1Q8N2Q7 840 aa22.38■■□□□ 1.17
MATR3-208ENST00000504045 THUMPD2Q9BTF0 503 aaKnown RBP22.38■■□□□ 1.17
MATR3-208ENST00000504045 CD2APQ9Y5K6 639 aa22.38■■□□□ 1.17
MATR3-208ENST00000504045 CANXP27824 592 aaKnown RBP22.37■■□□□ 1.17
MATR3-208ENST00000504045 PNNQ9H307 717 aaKnown RBP22.37■■□□□ 1.17
MATR3-208ENST00000504045 LAMB4A4D0S4 1761 aa22.37■■□□□ 1.17
MATR3-208ENST00000504045 PRAMEF22A3QJZ6 481 aa22.36■■□□□ 1.17
MATR3-208ENST00000504045 ZNF316A6NFI3 1004 aaPredicted RBP22.36■■□□□ 1.17
MATR3-208ENST00000504045 FKBP8Q14318 412 aa22.36■■□□□ 1.17
MATR3-208ENST00000504045 MIS18AQ9NYP9 233 aa22.36■■□□□ 1.17
MATR3-208ENST00000504045 CCDC146Q8IYE0 955 aa22.36■■□□□ 1.17
MATR3-208ENST00000504045 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
MATR3-208ENST00000504045 SCN7AQ01118 1682 aa22.35■■□□□ 1.17
MATR3-208ENST00000504045 STARD3NLO95772 234 aa22.35■■□□□ 1.17
MATR3-208ENST00000504045 TAF7Q15545 349 aaPredicted RBP22.35■■□□□ 1.17
MATR3-208ENST00000504045 USPL1Q5W0Q7 1092 aa22.35■■□□□ 1.17
MATR3-208ENST00000504045 GPR162Q16538 588 aa22.34■■□□□ 1.17
MATR3-208ENST00000504045 BRCA1P38398 1863 aaKnown RBP22.34■■□□□ 1.17
MATR3-208ENST00000504045 TEX13AQ9BXU3 409 aaPredicted RBP22.33■■□□□ 1.17
MATR3-208ENST00000504045 USP16Q9Y5T5 823 aa22.33■■□□□ 1.17
MATR3-208ENST00000504045 BCORQ6W2J9 1755 aa22.33■■□□□ 1.16
MATR3-208ENST00000504045 A1BGP04217 495 aa22.32■■□□□ 1.16
MATR3-208ENST00000504045 YBX3P16989 372 aaKnown RBP eCLIP22.32■■□□□ 1.162e-9■■■■□ 20.8
MATR3-208ENST00000504045 EIF5P55010 431 aaKnown RBP22.32■■□□□ 1.16
MATR3-208ENST00000504045 NARFQ9UHQ1 456 aa22.32■■□□□ 1.16
MATR3-208ENST00000504045 C10orf71Q711Q0 1435 aa22.32■■□□□ 1.16
MATR3-208ENST00000504045 ZPR1O75312 459 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 RIPK4P57078 832 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 DDR1Q08345 913 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 WDR43Q15061 677 aaKnown RBP eCLIP22.31■■□□□ 1.167e-6■■□□□ 14.2
MATR3-208ENST00000504045 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 RRP7AQ9Y3A4 280 aaKnown RBP22.31■■□□□ 1.16
MATR3-208ENST00000504045 NRXN2Q9P2S2 1712 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 YY1P25490 414 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 TMPOP42166 694 aaKnown RBP22.31■■□□□ 1.16
MATR3-208ENST00000504045 WWC3Q9ULE0 1092 aa22.31■■□□□ 1.16
MATR3-208ENST00000504045 PIP4K2AP48426 406 aaPredicted RBP22.3■■□□□ 1.16
MATR3-208ENST00000504045 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
MATR3-208ENST00000504045 PARP3Q9Y6F1 533 aa22.3■■□□□ 1.16
MATR3-208ENST00000504045 PXDNLA1KZ92 1463 aa22.3■■□□□ 1.16
MATR3-208ENST00000504045 SNRPA1P09661 255 aaKnown RBP22.29■■□□□ 1.16
MATR3-208ENST00000504045 TM4SF1P30408 202 aa22.28■■□□□ 1.16
MATR3-208ENST00000504045 IL6STP40189 918 aaPredicted RBP22.27■■□□□ 1.16
MATR3-208ENST00000504045 CCDC184Q52MB2 194 aa22.27■■□□□ 1.16
MATR3-208ENST00000504045 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
MATR3-208ENST00000504045 POLRMTO00411 1230 aaKnown RBP22.26■■□□□ 1.15
MATR3-208ENST00000504045 NEUROD2Q15784 382 aa22.26■■□□□ 1.15
MATR3-208ENST00000504045 TBC1D2BQ9UPU7 963 aa22.26■■□□□ 1.15
MATR3-208ENST00000504045 NFIXQ14938 502 aa22.26■■□□□ 1.15
MATR3-208ENST00000504045 PNISRQ8TF01 805 aaKnown RBP22.26■■□□□ 1.15
MATR3-208ENST00000504045 EIF4A1P60842 406 aaKnown RBP22.25■■□□□ 1.15
MATR3-208ENST00000504045 A0A087WZG4 1122 aa22.24■■□□□ 1.15
MATR3-208ENST00000504045 NBPF26B4DH59 902 aa22.24■■□□□ 1.15
MATR3-208ENST00000504045 NBPF10Q6P3W6 841 aaKnown RBP22.24■■□□□ 1.15
MATR3-208ENST00000504045 NBPF15Q8N660 670 aa22.24■■□□□ 1.15
MATR3-208ENST00000504045 ANKRD31Q8N7Z5 1873 aa22.24■■□□□ 1.15
MATR3-208ENST00000504045 A0A0G2JLW4 131 aa22.23■■□□□ 1.15
MATR3-208ENST00000504045 ARFGEF1Q9Y6D6 1849 aa22.23■■□□□ 1.15
MATR3-208ENST00000504045 GIGYF1O75420 1035 aaPredicted RBP22.22■■□□□ 1.15
MATR3-208ENST00000504045 TRIM35Q9UPQ4 493 aa22.22■■□□□ 1.15
MATR3-208ENST00000504045 DPEP1P16444 411 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 LMOD3Q0VAK6 560 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 TSPYL4Q9UJ04 414 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 DLEC1Q9Y238 1755 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 NUP98P52948 1817 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 CAMTA2O94983 1202 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 TGFB2P61812 414 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 TBC1D9BQ66K14 1250 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 BICDL1Q6ZP65 573 aa22.21■■□□□ 1.15
MATR3-208ENST00000504045 DZIP3Q86Y13 1208 aaKnown RBP22.2■■□□□ 1.14
MATR3-208ENST00000504045 GRIN3BO60391 1043 aa22.19■■□□□ 1.14
MATR3-208ENST00000504045 SERPINB2P05120 415 aa22.18■■□□□ 1.14
MATR3-208ENST00000504045 NPM2Q86SE8 214 aaKnown RBP22.18■■□□□ 1.14
MATR3-208ENST00000504045 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
MATR3-208ENST00000504045 KCNA3P22001 575 aa22.17■■□□□ 1.14
MATR3-208ENST00000504045 COL11A2P13942 1736 aaPredicted RBP22.16■■□□□ 1.14
MATR3-208ENST00000504045 APAF1O14727 1248 aa22.16■■□□□ 1.14
MATR3-208ENST00000504045 CHRNA5P30532 468 aa22.16■■□□□ 1.14
MATR3-208ENST00000504045 CACNA1SQ13698 1873 aa22.15■■□□□ 1.14
MATR3-208ENST00000504045 ANP32CO43423 234 aa22.15■■□□□ 1.14
MATR3-208ENST00000504045 BABAM1Q9NWV8 329 aa22.14■■□□□ 1.13
MATR3-208ENST00000504045 BCS1LQ9Y276 419 aa22.14■■□□□ 1.13
MATR3-208ENST00000504045 CHL1O00533 1208 aa22.13■■□□□ 1.13
MATR3-208ENST00000504045 NGEFQ8N5V2 710 aa22.13■■□□□ 1.13
MATR3-208ENST00000504045 LAS1LQ9Y4W2 734 aaKnown RBP22.13■■□□□ 1.13
MATR3-208ENST00000504045 KRT24Q2M2I5 525 aa22.12■■□□□ 1.13
MATR3-208ENST00000504045 CCDC24Q8N4L8 307 aa22.12■■□□□ 1.13
MATR3-208ENST00000504045 ZNF784Q8NCA9 323 aaPredicted RBP22.12■■□□□ 1.13
MATR3-208ENST00000504045 SENP3-EIF4A1A0A087X0R7 540 aa22.11■■□□□ 1.13
MATR3-208ENST00000504045 MYL6BP14649 208 aa22.11■■□□□ 1.13
MATR3-208ENST00000504045 HLFQ16534 295 aa22.11■■□□□ 1.13
MATR3-208ENST00000504045 PRR5LQ6MZQ0 368 aa22.11■■□□□ 1.13
MATR3-208ENST00000504045 MRS2Q9HD23 443 aa22.11■■□□□ 1.13
MATR3-208ENST00000504045 EIF2S2P20042 333 aaKnown RBP22.1■■□□□ 1.13
MATR3-208ENST00000504045 SETDB2Q96T68 719 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms