RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 NBPF4Q96M43 638 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 GRPEL1Q9HAV7 217 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 HYPKQ9NX55 129 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 BRPF3Q9ULD4 1205 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 EXOC6BQ9Y2D4 811 aa4.74□□□□□ -1.65
ALYREF-201ENST00000504015 LRRFIP2Q9Y608 721 aaKnown RBP4.74□□□□□ -1.65
ALYREF-201ENST00000504015 DCCP43146 1447 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 CRYBG1Q9Y4K1 1723 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 PNMA6EA0A0J9YXQ4 647 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 BTBD11A6QL63 1104 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 TRIM6-TRIM34B2RNG4 842 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 HIP1O00291 1037 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 RNMTO43148 476 aaKnown RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 SMARCA5O60264 1052 aaPredicted RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 SURF6O75683 361 aaKnown RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 GLRX3O76003 335 aaKnown RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 CD2BP2O95400 341 aaKnown RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 DDX58O95786 925 aaKnown RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 MBD3O95983 291 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 GCP02774 474 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 ZNF445P59923 1031 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 ZNF530Q6P9A1 599 aaPredicted RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 KSR2Q6VAB6 950 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 C14orf37Q86TY3 774 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 TICAM2Q86XR7 235 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 CNTROBQ8N137 903 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 OTUD7AQ8TE49 926 aaPredicted RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 RUFY2Q8WXA3 655 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 ANP32BQ92688 251 aaKnown RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 RBM42Q9BTD8 480 aaKnown RBP4.73□□□□□ -1.65
ALYREF-201ENST00000504015 AK9Q5TCS8 1911 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 ALS2Q96Q42 1657 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 RGPD2P0DJD1 1756 aa4.73□□□□□ -1.65
ALYREF-201ENST00000504015 UTYO14607 1347 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 PI4KAP2A4QPH2 592 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 APBB1O00213 710 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 SRGAP3O43295 1099 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 GIGYF1O75420 1035 aaPredicted RBP4.72□□□□□ -1.65
ALYREF-201ENST00000504015 PLEKHG5O94827 1062 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 SSFA2P28290 1259 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 HSPA4P34932 840 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 NEK4P51957 841 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 HSPA2P54652 639 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 NUTM2GQ5VZR2 741 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 KIAA1211Q6ZU35 1233 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 KRT28Q7Z3Y7 464 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 PPP1R42Q7Z4L9 355 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 CLASRPQ8N2M8 674 aaKnown RBP4.72□□□□□ -1.65
ALYREF-201ENST00000504015 PI4KAP1Q8N8J0 262 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 LINS1Q8NG48 757 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 RHPN1Q8TCX5 695 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 RILPL2Q969X0 211 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 LTV1Q96GA3 475 aaPredicted RBP4.72□□□□□ -1.65
ALYREF-201ENST00000504015 GZF1Q9H116 711 aaPredicted RBP4.72□□□□□ -1.65
ALYREF-201ENST00000504015 C19orf44Q9H6X5 657 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 PHAXQ9H814 394 aaKnown RBP4.72□□□□□ -1.65
ALYREF-201ENST00000504015 LGR6Q9HBX8 967 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 DDX21Q9NR30 783 aaKnown RBP eCLIP4.72□□□□□ -1.65
ALYREF-201ENST00000504015 SPG7Q9UQ90 795 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 DDX49Q9Y6V7 483 aaKnown RBP4.72□□□□□ -1.65
ALYREF-201ENST00000504015 COL15A1P39059 1388 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 SCN11AQ9UI33 1791 aa4.72□□□□□ -1.65
ALYREF-201ENST00000504015 C1orf167Q5SNV9 1468 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 ADCY9O60503 1353 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 SGSM2O43147 1006 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 NBPF7P0C2Y1 421 aaPredicted RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 EIF2S2P20042 333 aaKnown RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 CLCN1P35523 988 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 CCDC173Q0VFZ6 552 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 HS1BP3Q53T59 392 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 LARP1Q6PKG0 1096 aaKnown RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 PI4K2BQ8TCG2 481 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 ANKRD24Q8TF21 1146 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 SYAP1Q96A49 352 aaPredicted RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 EVI5LQ96CN4 794 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 TRIM44Q96DX7 344 aaPredicted RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 TMX3Q96JJ7 454 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 ZSCAN31Q96LW9 406 aaPredicted RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 PPP1R9BQ96SB3 815 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 TM6SF1Q9BZW5 370 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 ANO2Q9NQ90 1003 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 ECHDC1Q9NTX5 307 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 LMBRD1Q9NUN5 540 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 C9orf78Q9NZ63 289 aaPredicted RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 CHPF2Q9P2E5 772 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 RAD50Q92878 1312 aa4.71□□□□□ -1.66
ALYREF-201ENST00000504015 WDR33Q9C0J8 1336 aaKnown RBP4.71□□□□□ -1.66
ALYREF-201ENST00000504015 PARP4Q9UKK3 1724 aaKnown RBP4.7□□□□□ -1.66
ALYREF-201ENST00000504015 GRM8O00222 908 aa4.7□□□□□ -1.66
ALYREF-201ENST00000504015 PHF14O94880 888 aa4.7□□□□□ -1.66
ALYREF-201ENST00000504015 LETM1O95202 739 aaPredicted RBP4.7□□□□□ -1.66
ALYREF-201ENST00000504015 BRD1O95696 1058 aa4.7□□□□□ -1.66
ALYREF-201ENST00000504015 TATP17735 454 aaPredicted RBP4.7□□□□□ -1.66
ALYREF-201ENST00000504015 NCLP19338 710 aaKnown RBP4.7□□□□□ -1.66
ALYREF-201ENST00000504015 NEXNQ0ZGT2 675 aa4.7□□□□□ -1.66
ALYREF-201ENST00000504015 CSPP1Q1MSJ5 1256 aa4.7□□□□□ -1.66
ALYREF-201ENST00000504015 MCTP1Q6DN14 999 aa4.7□□□□□ -1.66
ALYREF-201ENST00000504015 PROSER2Q86WR7 435 aaPredicted RBP4.7□□□□□ -1.66
ALYREF-201ENST00000504015 USHBP1Q8N6Y0 703 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms