RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 PNMA6EA0A0J9YXQ4 647 aa26.54■■□□□ 1.84
UBE2D3-216ENST00000503742 CABP4P57796 275 aa26.54■■□□□ 1.84
UBE2D3-216ENST00000503742 NKX1-1Q15270 411 aaPredicted RBP26.54■■□□□ 1.84
UBE2D3-216ENST00000503742 STRN4Q9NRL3 753 aa26.54■■□□□ 1.84
UBE2D3-216ENST00000503742 EVA1CP58658 441 aa26.53■■□□□ 1.84
UBE2D3-216ENST00000503742 C16orf71Q8IYS4 520 aaPredicted RBP26.53■■□□□ 1.84
UBE2D3-216ENST00000503742 COL22A1Q8NFW1 1626 aaPredicted RBP26.53■■□□□ 1.84
UBE2D3-216ENST00000503742 GLI3P10071 1580 aa26.53■■□□□ 1.84
UBE2D3-216ENST00000503742 TTC5Q8N0Z6 440 aa26.52■■□□□ 1.84
UBE2D3-216ENST00000503742 MAP3K2Q9Y2U5 619 aa26.52■■□□□ 1.84
UBE2D3-216ENST00000503742 SMARCA5O60264 1052 aaPredicted RBP26.51■■□□□ 1.83
UBE2D3-216ENST00000503742 SNRPA1P09661 255 aaKnown RBP26.51■■□□□ 1.83
UBE2D3-216ENST00000503742 FMNL2Q96PY5 1086 aa26.51■■□□□ 1.83
UBE2D3-216ENST00000503742 COL14A1Q05707 1796 aaKnown RBP26.5■■□□□ 1.83
UBE2D3-216ENST00000503742 ERVV-2B6SEH9 535 aa26.5■■□□□ 1.83
UBE2D3-216ENST00000503742 ALDH1L1O75891 902 aa26.5■■□□□ 1.83
UBE2D3-216ENST00000503742 NBPF7P0C2Y1 421 aaPredicted RBP26.5■■□□□ 1.83
UBE2D3-216ENST00000503742 GSPT1P15170 499 aaKnown RBP26.5■■□□□ 1.83
UBE2D3-216ENST00000503742 SSH3Q8TE77 659 aa26.5■■□□□ 1.83
UBE2D3-216ENST00000503742 OTUD7AQ8TE49 926 aaPredicted RBP26.49■■□□□ 1.83
UBE2D3-216ENST00000503742 TTC22Q5TAA0 569 aa26.49■■□□□ 1.83
UBE2D3-216ENST00000503742 IBTKQ9P2D0 1353 aaPredicted RBP26.48■■□□□ 1.83
UBE2D3-216ENST00000503742 DDX58O95786 925 aaKnown RBP26.48■■□□□ 1.83
UBE2D3-216ENST00000503742 MFAP1P55081 439 aaKnown RBP26.48■■□□□ 1.83
UBE2D3-216ENST00000503742 EXOC6BQ9Y2D4 811 aa26.48■■□□□ 1.83
UBE2D3-216ENST00000503742 APBB1O00213 710 aa26.47■■□□□ 1.83
UBE2D3-216ENST00000503742 LAMB4A4D0S4 1761 aa26.47■■□□□ 1.83
UBE2D3-216ENST00000503742 UBR2Q8IWV8 1755 aa26.47■■□□□ 1.83
UBE2D3-216ENST00000503742 POLA2Q14181 598 aa26.47■■□□□ 1.83
UBE2D3-216ENST00000503742 LRP10Q7Z4F1 713 aa26.47■■□□□ 1.83
UBE2D3-216ENST00000503742 BTG4Q9NY30 223 aa26.47■■□□□ 1.83
UBE2D3-216ENST00000503742 USP16Q9Y5T5 823 aa26.47■■□□□ 1.83
UBE2D3-216ENST00000503742 C22orf23Q9BZE7 217 aa26.46■■□□□ 1.83
UBE2D3-216ENST00000503742 COL16A1Q07092 1604 aaPredicted RBP26.46■■□□□ 1.83
UBE2D3-216ENST00000503742 PAPPAQ13219 1627 aa26.46■■□□□ 1.83
UBE2D3-216ENST00000503742 SLC4A3P48751 1232 aa26.44■■□□□ 1.82
UBE2D3-216ENST00000503742 TBC1D9Q6ZT07 1266 aa26.44■■□□□ 1.82
UBE2D3-216ENST00000503742 PPP1R42Q7Z4L9 355 aa26.44■■□□□ 1.82
UBE2D3-216ENST00000503742 LINS1Q8NG48 757 aa26.44■■□□□ 1.82
UBE2D3-216ENST00000503742 LRRCC1Q9C099 1032 aa26.44■■□□□ 1.82
UBE2D3-216ENST00000503742 OSBPL3Q9H4L5 887 aa26.44■■□□□ 1.82
UBE2D3-216ENST00000503742 SALL3Q9BXA9 1300 aa26.43■■□□□ 1.82
UBE2D3-216ENST00000503742 DDX54Q8TDD1 881 aaKnown RBP26.43■■□□□ 1.82
UBE2D3-216ENST00000503742 DAXXQ9UER7 740 aaPredicted RBP26.43■■□□□ 1.82
UBE2D3-216ENST00000503742 CDC45O75419 566 aa26.42■■□□□ 1.82
UBE2D3-216ENST00000503742 AIMP1Q12904 312 aaKnown RBP26.42■■□□□ 1.82
UBE2D3-216ENST00000503742 MYL6BP14649 208 aa26.42■■□□□ 1.82
UBE2D3-216ENST00000503742 XAGE3Q8WTP9 111 aa26.42■■□□□ 1.82
UBE2D3-216ENST00000503742 TOGARAM1Q9Y4F4 1720 aa26.42■■□□□ 1.82
UBE2D3-216ENST00000503742 KCPQ6ZWJ8 1503 aa26.41■■□□□ 1.82
UBE2D3-216ENST00000503742 UTYO14607 1347 aa26.41■■□□□ 1.82
UBE2D3-216ENST00000503742 MTX1Q13505 466 aa26.41■■□□□ 1.82
UBE2D3-216ENST00000503742 CWF19L2Q2TBE0 894 aaKnown RBP26.41■■□□□ 1.82
UBE2D3-216ENST00000503742 DISP2A7MBM2 1401 aa26.41■■□□□ 1.82
UBE2D3-216ENST00000503742 COPS6Q7L5N1 327 aa26.4■■□□□ 1.82
UBE2D3-216ENST00000503742 C9orf78Q9NZ63 289 aaPredicted RBP26.4■■□□□ 1.82
UBE2D3-216ENST00000503742 TNS2Q63HR2 1409 aa26.39■■□□□ 1.82
UBE2D3-216ENST00000503742 SRGAP3O43295 1099 aa26.39■■□□□ 1.82
UBE2D3-216ENST00000503742 RBM25P49756 843 aaKnown RBP26.39■■□□□ 1.82
UBE2D3-216ENST00000503742 PDE1AP54750 535 aa26.39■■□□□ 1.82
UBE2D3-216ENST00000503742 RIC3Q7Z5B4 369 aa26.39■■□□□ 1.82
UBE2D3-216ENST00000503742 BCL11AQ9H165 835 aa26.39■■□□□ 1.82
UBE2D3-216ENST00000503742 RAB11FIP3O75154 756 aa26.38■■□□□ 1.81
UBE2D3-216ENST00000503742 USP35Q9P2H5 1018 aa26.38■■□□□ 1.81
UBE2D3-216ENST00000503742 HDAC5Q9UQL6 1122 aa26.38■■□□□ 1.81
UBE2D3-216ENST00000503742 ERBB4Q15303 1308 aa26.38■■□□□ 1.81
UBE2D3-216ENST00000503742 PLCH1Q4KWH8 1693 aa26.38■■□□□ 1.81
UBE2D3-216ENST00000503742 IGKV5-2P06315 115 aa26.38■■□□□ 1.81
UBE2D3-216ENST00000503742 GRM8O00222 908 aa26.37■■□□□ 1.81
UBE2D3-216ENST00000503742 METTL22Q9BUU2 404 aaPredicted RBP26.37■■□□□ 1.81
UBE2D3-216ENST00000503742 SDSP20132 328 aa26.37■■□□□ 1.81
UBE2D3-216ENST00000503742 BECN1Q14457 450 aa26.37■■□□□ 1.81
UBE2D3-216ENST00000503742 PHLPP1O60346 1717 aa26.36■■□□□ 1.81
UBE2D3-216ENST00000503742 ANKRD13DQ6ZTN6 518 aa26.36■■□□□ 1.81
UBE2D3-216ENST00000503742 TUBGCP6Q96RT7 1819 aa26.36■■□□□ 1.81
UBE2D3-216ENST00000503742 SURF6O75683 361 aaKnown RBP26.35■■□□□ 1.81
UBE2D3-216ENST00000503742 NEURL1BA8MQ27 555 aa26.34■■□□□ 1.81
UBE2D3-216ENST00000503742 PIP4K2AP48426 406 aaPredicted RBP26.34■■□□□ 1.81
UBE2D3-216ENST00000503742 NEXNQ0ZGT2 675 aa26.34■■□□□ 1.81
UBE2D3-216ENST00000503742 STAP2Q9UGK3 403 aa26.34■■□□□ 1.81
UBE2D3-216ENST00000503742 EIF5BO60841 1220 aaKnown RBP26.33■■□□□ 1.81
UBE2D3-216ENST00000503742 ARFGEF2Q9Y6D5 1785 aa26.33■■□□□ 1.81
UBE2D3-216ENST00000503742 KAZALD1Q96I82 304 aa26.33■■□□□ 1.8
UBE2D3-216ENST00000503742 NBPF26B4DH59 902 aa26.32■■□□□ 1.8
UBE2D3-216ENST00000503742 MX1P20591 662 aa26.32■■□□□ 1.8
UBE2D3-216ENST00000503742 NBPF14Q5TI25 921 aa26.32■■□□□ 1.8
UBE2D3-216ENST00000503742 NBPF10Q6P3W6 841 aaKnown RBP26.32■■□□□ 1.8
UBE2D3-216ENST00000503742 NBPF15Q8N660 670 aa26.32■■□□□ 1.8
UBE2D3-216ENST00000503742 WNK3Q9BYP7 1800 aa26.32■■□□□ 1.8
UBE2D3-216ENST00000503742 RHPN1Q8TCX5 695 aa26.31■■□□□ 1.8
UBE2D3-216ENST00000503742 SUCLG2Q96I99 432 aa26.31■■□□□ 1.8
UBE2D3-216ENST00000503742 GCKRQ14397 625 aa26.31■■□□□ 1.8
UBE2D3-216ENST00000503742 HSP90AB4PQ58FF6 505 aa26.31■■□□□ 1.8
UBE2D3-216ENST00000503742 KIF1BPQ96EK5 621 aa26.31■■□□□ 1.8
UBE2D3-216ENST00000503742 MYD88Q99836 296 aa26.31■■□□□ 1.8
UBE2D3-216ENST00000503742 TBC1D2Q9BYX2 928 aa26.3■■□□□ 1.8
UBE2D3-216ENST00000503742 TMOD3Q9NYL9 352 aa26.3■■□□□ 1.8
UBE2D3-216ENST00000503742 AOX1Q06278 1338 aa26.3■■□□□ 1.8
UBE2D3-216ENST00000503742 ITGB4P16144 1822 aa26.29■■□□□ 1.8
UBE2D3-216ENST00000503742 PLBD2Q8NHP8 589 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms