RNA–Protein interactions for RNA: ENST00000503147.1

YIPF3-211, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 652 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-211ENST00000503147 MSH5O43196 834 aa16.24■□□□□ 0.19
YIPF3-211ENST00000503147 STARD3NLO95772 234 aa16.24■□□□□ 0.19
YIPF3-211ENST00000503147 SNRPA1P09661 255 aaKnown RBP16.24■□□□□ 0.19
YIPF3-211ENST00000503147 PTGER2P43116 358 aa16.24■□□□□ 0.19
YIPF3-211ENST00000503147 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
YIPF3-211ENST00000503147 TRAPPC3LQ5T215 181 aa16.24■□□□□ 0.19
YIPF3-211ENST00000503147 CCDC87Q9NVE4 849 aa16.24■□□□□ 0.19
YIPF3-211ENST00000503147 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
YIPF3-211ENST00000503147 USP16Q9Y5T5 823 aa16.24■□□□□ 0.19
YIPF3-211ENST00000503147 CCDC27Q2M243 656 aa16.23■□□□□ 0.19
YIPF3-211ENST00000503147 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
YIPF3-211ENST00000503147 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
YIPF3-211ENST00000503147 KDM3BQ7LBC6 1761 aa16.23■□□□□ 0.19
YIPF3-211ENST00000503147 GIGYF1O75420 1035 aaPredicted RBP16.22■□□□□ 0.19
YIPF3-211ENST00000503147 ZNF853P0CG23 659 aa16.22■□□□□ 0.19
YIPF3-211ENST00000503147 ADRA2BP18089 450 aa16.22■□□□□ 0.19
YIPF3-211ENST00000503147 CFAP44Q96MT7 982 aa16.22■□□□□ 0.19
YIPF3-211ENST00000503147 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
YIPF3-211ENST00000503147 A1BGP04217 495 aa16.21■□□□□ 0.19
YIPF3-211ENST00000503147 WWC1Q8IX03 1113 aa16.21■□□□□ 0.19
YIPF3-211ENST00000503147 LAS1LQ9Y4W2 734 aaKnown RBP16.21■□□□□ 0.19
YIPF3-211ENST00000503147 SOS1Q07889 1333 aaPredicted RBP16.2■□□□□ 0.18
YIPF3-211ENST00000503147 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
YIPF3-211ENST00000503147 EIF5P55010 431 aaKnown RBP16.19■□□□□ 0.18
YIPF3-211ENST00000503147 CALD1Q05682 793 aaKnown RBP16.19■□□□□ 0.18
YIPF3-211ENST00000503147 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
YIPF3-211ENST00000503147 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
YIPF3-211ENST00000503147 RFC4P35249 363 aa16.18■□□□□ 0.18
YIPF3-211ENST00000503147 MSL1Q68DK7 614 aa16.18■□□□□ 0.18
YIPF3-211ENST00000503147 MBIPQ9NS73 344 aa16.18■□□□□ 0.18
YIPF3-211ENST00000503147 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
YIPF3-211ENST00000503147 GNAI1P63096 354 aa16.17■□□□□ 0.18
YIPF3-211ENST00000503147 KRT24Q2M2I5 525 aa16.17■□□□□ 0.18
YIPF3-211ENST00000503147 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
YIPF3-211ENST00000503147 GYS1P13807 737 aa16.16■□□□□ 0.18
YIPF3-211ENST00000503147 PIP4K2AP48426 406 aaPredicted RBP16.16■□□□□ 0.18
YIPF3-211ENST00000503147 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
YIPF3-211ENST00000503147 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
YIPF3-211ENST00000503147 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
YIPF3-211ENST00000503147 COL24A1Q17RW2 1714 aa16.16■□□□□ 0.18
YIPF3-211ENST00000503147 COL15A1P39059 1388 aa16.15■□□□□ 0.18
YIPF3-211ENST00000503147 WDR63Q8IWG1 891 aa16.15■□□□□ 0.18
YIPF3-211ENST00000503147 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
YIPF3-211ENST00000503147 IL16Q14005 1332 aa16.15■□□□□ 0.18
YIPF3-211ENST00000503147 USP42Q9H9J4 1324 aaKnown RBP16.15■□□□□ 0.18
YIPF3-211ENST00000503147 POLD1P28340 1107 aa16.14■□□□□ 0.17
YIPF3-211ENST00000503147 ARXQ96QS3 562 aa16.14■□□□□ 0.17
YIPF3-211ENST00000503147 NARFQ9UHQ1 456 aa16.14■□□□□ 0.17
YIPF3-211ENST00000503147 A0A087WZG4 1122 aa16.13■□□□□ 0.17
YIPF3-211ENST00000503147 ZPR1O75312 459 aa16.13■□□□□ 0.17
YIPF3-211ENST00000503147 FKBP8Q14318 412 aa16.13■□□□□ 0.17
YIPF3-211ENST00000503147 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
YIPF3-211ENST00000503147 NLGN1Q8N2Q7 840 aa16.13■□□□□ 0.17
YIPF3-211ENST00000503147 PPP1R1BQ9UD71 204 aaPredicted RBP16.13■□□□□ 0.17
YIPF3-211ENST00000503147 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
YIPF3-211ENST00000503147 EIF2S2P20042 333 aaKnown RBP16.12■□□□□ 0.17
YIPF3-211ENST00000503147 TSR2Q969E8 191 aaKnown RBP16.12■□□□□ 0.17
YIPF3-211ENST00000503147 BCL2L12Q9HB09 334 aa16.12■□□□□ 0.17
YIPF3-211ENST00000503147 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
YIPF3-211ENST00000503147 ZNF330Q9Y3S2 320 aaPredicted RBP16.12■□□□□ 0.17
YIPF3-211ENST00000503147 ZNF521Q96K83 1311 aa16.12■□□□□ 0.17
YIPF3-211ENST00000503147 PDIA6Q15084 440 aa16.11■□□□□ 0.17
YIPF3-211ENST00000503147 DUSP27Q5VZP5 1158 aa16.11■□□□□ 0.17
YIPF3-211ENST00000503147 C8orf58Q8NAV2 365 aa16.11■□□□□ 0.17
YIPF3-211ENST00000503147 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
YIPF3-211ENST00000503147 MMP10P09238 476 aa16.1■□□□□ 0.17
YIPF3-211ENST00000503147 HOXB7P09629 217 aa16.1■□□□□ 0.17
YIPF3-211ENST00000503147 TM4SF1P30408 202 aa16.1■□□□□ 0.17
YIPF3-211ENST00000503147 LRP10Q7Z4F1 713 aa16.1■□□□□ 0.17
YIPF3-211ENST00000503147 LAMB4A4D0S4 1761 aa16.1■□□□□ 0.17
YIPF3-211ENST00000503147 ELL2O00472 640 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-211ENST00000503147 CAMTA2O94983 1202 aa16.09■□□□□ 0.17
YIPF3-211ENST00000503147 MYL6BP14649 208 aa16.09■□□□□ 0.17
YIPF3-211ENST00000503147 PROSER3Q2NL68 480 aa16.09■□□□□ 0.17
YIPF3-211ENST00000503147 DZIP3Q86Y13 1208 aaKnown RBP16.09■□□□□ 0.17
YIPF3-211ENST00000503147 NECTIN2Q92692 538 aa16.09■□□□□ 0.17
YIPF3-211ENST00000503147 FHDC1Q9C0D6 1143 aaPredicted RBP16.09■□□□□ 0.17
YIPF3-211ENST00000503147 ERBB4Q15303 1308 aa16.09■□□□□ 0.17
YIPF3-211ENST00000503147 GOLGB1Q14789 3259 aaKnown RBP16.08■□□□□ 0.17
YIPF3-211ENST00000503147 NPM2Q86SE8 214 aaKnown RBP16.08■□□□□ 0.16
YIPF3-211ENST00000503147 TSPYL6Q8N831 410 aa16.08■□□□□ 0.16
YIPF3-211ENST00000503147 ANXA1P04083 346 aa16.07■□□□□ 0.16
YIPF3-211ENST00000503147 DDR1Q08345 913 aa16.07■□□□□ 0.16
YIPF3-211ENST00000503147 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
YIPF3-211ENST00000503147 SYT17Q9BSW7 474 aa16.07■□□□□ 0.16
YIPF3-211ENST00000503147 FANCIQ9NVI1 1328 aa16.07■□□□□ 0.16
YIPF3-211ENST00000503147 NFIXQ14938 502 aa16.06■□□□□ 0.16
YIPF3-211ENST00000503147 TTLL7Q6ZT98 887 aa16.06■□□□□ 0.16
YIPF3-211ENST00000503147 DDX21Q9NR30 783 aaKnown RBP eCLIP16.06■□□□□ 0.16
YIPF3-211ENST00000503147 UTRNP46939 3433 aa16.06■□□□□ 0.16
YIPF3-211ENST00000503147 POLRMTO00411 1230 aaKnown RBP16.05■□□□□ 0.16
YIPF3-211ENST00000503147 TBC1D9BQ66K14 1250 aa16.05■□□□□ 0.16
YIPF3-211ENST00000503147 CHPF2Q9P2E5 772 aa16.05■□□□□ 0.16
YIPF3-211ENST00000503147 PARP3Q9Y6F1 533 aa16.05■□□□□ 0.16
YIPF3-211ENST00000503147 RGL2O15211 777 aa16.04■□□□□ 0.16
YIPF3-211ENST00000503147 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
YIPF3-211ENST00000503147 HLFQ16534 295 aa16.04■□□□□ 0.16
YIPF3-211ENST00000503147 CLEC4GQ6UXB4 293 aa16.04■□□□□ 0.16
YIPF3-211ENST00000503147 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
YIPF3-211ENST00000503147 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms