RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 GTF2E1P29083 439 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 SKOR1P84550 965 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 NR5A1Q13285 461 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 AAMPQ13685 434 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 PWP2Q15269 919 aaKnown RBP6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 PPP1R18Q6NYC8 613 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 NOP9Q86U38 636 aaKnown RBP6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 SCG3Q8WXD2 468 aaKnown RBP6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 PLA2G2EQ9NZK7 142 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 WASF2Q9Y6W5 498 aa6.05□□□□□ -1.44
HMGB1P21-201ENST00000502313 TLDC2A0PJX2 215 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 PPP1R12BO60237 982 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 DKK1O94907 266 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 GNRH1P01148 92 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 WEE1P30291 646 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 FKBP4Q02790 459 aaKnown RBP eCLIP6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 FKBP5Q13451 457 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 PLA2G2CQ5R387 149 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 TICAM2Q86XR7 235 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 NBPF15Q8N660 670 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 ZNF784Q8NCA9 323 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 GAS2L2Q8NHY3 880 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 GPATCH3Q96I76 525 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 CDK15Q96Q40 435 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 TMPRSS4Q9NRS4 437 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 PPME1Q9Y570 386 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 EMILIN1Q9Y6C2 1016 aa6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 URB2Q14146 1524 aaKnown RBP6.04□□□□□ -1.44
HMGB1P21-201ENST00000502313 FAM13AO94988 1023 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 RAD51AP2Q09MP3 1159 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 CCDC144BQ3MJ40 725 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 PPP1R26Q5T8A7 1209 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 TNS4Q8IZW8 715 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 OSBPL3Q9H4L5 887 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 PRDM16Q9HAZ2 1276 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 SLC52A1Q9NWF4 448 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 SEPT3Q9UH03 358 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 DCTN4Q9UJW0 460 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 RIPOR2Q9Y4F9 1068 aa6.03□□□□□ -1.44
HMGB1P21-201ENST00000502313 WASLO00401 505 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 NDUFB5O43674 189 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 INHAP05111 366 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 NAA30Q147X3 362 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 TLR1Q15399 786 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 TAF7LQ5H9L4 462 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 LDLRAD1Q5T700 205 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 HELQQ8TDG4 1101 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 TMC1Q8TDI8 760 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 COL26A1Q96A83 441 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 PRKAG2Q9UGJ0 569 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 TMA7Q9Y2S6 64 aaKnown RBP6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 SUGT1Q9Y2Z0 365 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 ATAD2Q6PL18 1390 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 CEP164Q9UPV0 1460 aa6.02□□□□□ -1.45
HMGB1P21-201ENST00000502313 TMEM229AB2RXF0 380 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 WNT7AO00755 349 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 CLSTN1O94985 981 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 ALDH1A1P00352 501 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 GTF2F1P35269 517 aaKnown RBP eCLIP6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 SLC19A1P41440 591 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 PSMA6P60900 246 aaKnown RBP6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 EGFLAMQ63HQ2 1017 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 MPNDQ8N594 471 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 NLRP3Q96P20 1036 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 TSPAN10Q9H1Z9 355 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 ETNK1Q9HBU6 452 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 ARHGEF10LQ9HCE6 1279 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 RAB6BQ9NRW1 208 aa6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 CUEDC1Q9NWM3 386 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 IQSEC3Q9UPP2 1182 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 DNMT3AQ9Y6K1 912 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P21-201ENST00000502313 PLEKHD1A6NEE1 506 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 SCAMP3O14828 347 aaKnown RBP6□□□□□ -1.45
HMGB1P21-201ENST00000502313 ITGAEP38570 1179 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 SCNN1DP51172 638 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 IRX6P78412 446 aaPredicted RBP6□□□□□ -1.45
HMGB1P21-201ENST00000502313 MTMR3Q13615 1198 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 ALKBH2Q6NS38 261 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 C16orf46Q6P387 395 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 SLC9A9Q8IVB4 645 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 ASB16Q96NS5 453 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 PIF1Q9H611 641 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 ZNF232Q9UNY5 417 aa6□□□□□ -1.45
HMGB1P21-201ENST00000502313 A6NJY4 79 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 GRM5P41594 1212 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 MRPL58Q14197 206 aaKnown RBP5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 EAPPQ56P03 285 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 SDE2Q6IQ49 451 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 ABTB2Q8N961 1025 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 PMFBP1Q8TBY8 1022 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 SPACA7Q96KW9 195 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 MRGPRX2Q96LB1 330 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 TINF2Q9BSI4 451 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 PRDM2Q13029 1718 aa5.99□□□□□ -1.45
HMGB1P21-201ENST00000502313 MEN1O00255 615 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 TPD52L2O43399 206 aaKnown RBP5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 STAU1O95793 577 aaKnown RBP5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 ADH1AP07327 375 aa5.98□□□□□ -1.45
HMGB1P21-201ENST00000502313 ATP2B1P20020 1258 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms