RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 SUGT1Q9Y2Z0 365 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 PTMAP06454 111 aaKnown RBP6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 C1QBPQ07021 282 aaKnown RBP6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 GPATCH11Q8N954 259 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 FAM212AQ96EL1 285 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 AGLP35573 1532 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 PIBF1Q8WXW3 757 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 OGFRQ9NZT2 677 aa6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 NPHP4O75161 1426 aaPredicted RBP6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 KDM5AP29375 1690 aaKnown RBP6.99□□□□□ -1.29
SOX2-OT-218ENST00000498731 ACEP12821 1306 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 FKBP5Q13451 457 aaPredicted RBP6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 DCTN1Q14203 1278 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 GIMAP6Q6P9H5 292 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 EXOC8Q8IYI6 725 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 SMC4Q9NTJ3 1288 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 CCDC39Q9UFE4 941 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 USP25Q9UHP3 1055 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 ZDHHC9Q9Y397 364 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 A2ML1A8K2U0 1454 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 FAM193AP78312 1265 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 ESCO1Q5FWF5 840 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 MEX3CQ5U5Q3 659 aaKnown RBP6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 ZGPATQ8N5A5 531 aaKnown RBP6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 DDX41Q9UJV9 622 aaKnown RBP6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 TMEM2Q9UHN6 1383 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 PIK3C2BO00750 1634 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 MAFGO15525 162 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 DHX16O60231 1041 aaKnown RBP6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 EXOSC9Q06265 439 aaKnown RBP6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 SKOR2Q2VWA4 1001 aaPredicted RBP6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 NEK11Q8NG66 645 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 SPATA32Q96LK8 384 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 PPME1Q9Y570 386 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 PPIP5K1Q6PFW1 1433 aa6.98□□□□□ -1.29
SOX2-OT-218ENST00000498731 NEXMIFQ5QGS0 1516 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 SULT6B1Q6IMI4 303 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 ABTB2Q8N961 1025 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 POLKQ9UBT6 870 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 TMPOP42166 694 aaKnown RBP6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 RBM6P78332 1123 aaKnown RBP6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 KIF18AQ8NI77 898 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 VTI1AQ96AJ9 217 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 PRIMPOLQ96LW4 560 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 TMEM94Q12767 1356 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 CEP170BQ9Y4F5 1589 aaPredicted RBP6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 CTIFO43310 598 aaKnown RBP6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 DTNBO60941 627 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 PSME1Q06323 249 aa6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 GEMIN8Q9NWZ8 242 aaKnown RBP6.97□□□□□ -1.29
SOX2-OT-218ENST00000498731 IQGAP1P46940 1657 aa6.96□□□□□ -1.29
SOX2-OT-218ENST00000498731 KMT5BQ4FZB7 885 aa6.96□□□□□ -1.29
SOX2-OT-218ENST00000498731 GDPD2Q9HCC8 539 aa6.96□□□□□ -1.29
SOX2-OT-218ENST00000498731 ROBO2Q9HCK4 1378 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 IBTKQ9P2D0 1353 aaPredicted RBP6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 SBNO2Q9Y2G9 1366 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 MYO5BQ9ULV0 1848 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 PLEKHG3A1L390 1219 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 PEX14O75381 377 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 HSP90AB2PQ58FF8 381 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 LRSAM1Q6UWE0 723 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 C10orf67Q8IYJ2 551 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 PRR36Q9H6K5 1346 aa6.96□□□□□ -1.3
SOX2-OT-218ENST00000498731 FAM83GA6ND36 823 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 NPHP1O15259 732 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 ADAMTS2O95450 1211 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 APBB1IPQ7Z5R6 666 aaPredicted RBP6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 ITPRIPQ8IWB1 547 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 CARD10Q9BWT7 1032 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 EXOC6BQ9Y2D4 811 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 PREX1Q8TCU6 1659 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 FOXO3O43524 673 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 GABPB1Q06547 395 aaPredicted RBP6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 SYT10Q6XYQ8 523 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 PHACTR3Q96KR7 559 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 SLAIN2Q9P270 581 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 ALKQ9UM73 1620 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 RAB11FIP3O75154 756 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 MCM5P33992 734 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 TRMT2AQ8IZ69 625 aaKnown RBP6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 GTF3C6Q969F1 213 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 MORC2Q9Y6X9 1032 aaPredicted RBP6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 QRICH2Q9H0J4 1663 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 ADGRB1O14514 1584 aa6.95□□□□□ -1.3
SOX2-OT-218ENST00000498731 ABCC11Q96J66 1382 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 A0A0G2JS52 829 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 E2F4Q16254 413 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 SPC24Q8NBT2 197 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 SPTLC3Q9NUV7 552 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 MIS18AQ9NYP9 233 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 TULP4Q9NRJ4 1543 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 POLR3AO14802 1390 aaPredicted RBP6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 ANKRD65E5RJM6 399 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 GADD45BO75293 160 aaPredicted RBP6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 USHBP1Q8N6Y0 703 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 TTC21BQ7Z4L5 1316 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 NPC1L1Q9UHC9 1359 aa6.94□□□□□ -1.3
SOX2-OT-218ENST00000498731 PPLO60437 1756 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms