RNA–Protein interactions for RNA: ENST00000498027.5

CAPN2-212, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 1,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-212ENST00000498027 NECTIN2Q92692 538 aa19.55■□□□□ 0.72
CAPN2-212ENST00000498027 HYPKQ9NX55 129 aa19.55■□□□□ 0.72
CAPN2-212ENST00000498027 CHPF2Q9P2E5 772 aa19.55■□□□□ 0.72
CAPN2-212ENST00000498027 RGS12O14924 1447 aa19.55■□□□□ 0.72
CAPN2-212ENST00000498027 ERBB4Q15303 1308 aa19.54■□□□□ 0.72
CAPN2-212ENST00000498027 G2E3Q7L622 706 aa19.54■□□□□ 0.72
CAPN2-212ENST00000498027 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
CAPN2-212ENST00000498027 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
CAPN2-212ENST00000498027 VSIG10Q8N0Z9 540 aa19.53■□□□□ 0.72
CAPN2-212ENST00000498027 KCPQ6ZWJ8 1503 aa19.53■□□□□ 0.72
CAPN2-212ENST00000498027 CACNA1FO60840 1977 aa19.53■□□□□ 0.72
CAPN2-212ENST00000498027 THSD7AQ9UPZ6 1657 aa19.53■□□□□ 0.72
CAPN2-212ENST00000498027 CCT4P50991 539 aaKnown RBP19.52■□□□□ 0.72
CAPN2-212ENST00000498027 FKBP5Q13451 457 aaPredicted RBP19.52■□□□□ 0.72
CAPN2-212ENST00000498027 TEX13AQ9BXU3 409 aaPredicted RBP19.52■□□□□ 0.72
CAPN2-212ENST00000498027 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
CAPN2-212ENST00000498027 ATG3Q9NT62 314 aa19.51■□□□□ 0.71
CAPN2-212ENST00000498027 GLI3P10071 1580 aa19.51■□□□□ 0.71
CAPN2-212ENST00000498027 UBR2Q8IWV8 1755 aa19.51■□□□□ 0.71
CAPN2-212ENST00000498027 PRAMEF22A3QJZ6 481 aa19.51■□□□□ 0.71
CAPN2-212ENST00000498027 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
CAPN2-212ENST00000498027 QTRT2Q9H974 415 aaKnown RBP19.51■□□□□ 0.71
CAPN2-212ENST00000498027 ZBTB40Q9NUA8 1239 aa19.51■□□□□ 0.71
CAPN2-212ENST00000498027 PXDNLA1KZ92 1463 aa19.5■□□□□ 0.71
CAPN2-212ENST00000498027 A0A0G2JS52 829 aa19.5■□□□□ 0.71
CAPN2-212ENST00000498027 ZBTB7BO15156 539 aaPredicted RBP19.5■□□□□ 0.71
CAPN2-212ENST00000498027 MYT1Q01538 1121 aa19.5■□□□□ 0.71
CAPN2-212ENST00000498027 PDIA6Q15084 440 aa19.49■□□□□ 0.71
CAPN2-212ENST00000498027 ZNF772Q68DY9 489 aaPredicted RBP19.49■□□□□ 0.71
CAPN2-212ENST00000498027 SYTL4Q96C24 671 aaPredicted RBP19.49■□□□□ 0.71
CAPN2-212ENST00000498027 PHAXQ9H814 394 aaKnown RBP19.49■□□□□ 0.71
CAPN2-212ENST00000498027 ASAP1Q9ULH1 1129 aa19.49■□□□□ 0.71
CAPN2-212ENST00000498027 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
CAPN2-212ENST00000498027 PTCD1O75127 700 aaKnown RBP19.48■□□□□ 0.71
CAPN2-212ENST00000498027 DDX58O95786 925 aaKnown RBP19.48■□□□□ 0.71
CAPN2-212ENST00000498027 CENPQQ7L2Z9 268 aaPredicted RBP19.48■□□□□ 0.71
CAPN2-212ENST00000498027 C5P01031 1676 aa19.46■□□□□ 0.71
CAPN2-212ENST00000498027 DOT1LQ8TEK3 1739 aa19.46■□□□□ 0.71
CAPN2-212ENST00000498027 LAMB4A4D0S4 1761 aa19.46■□□□□ 0.71
CAPN2-212ENST00000498027 SMARCC1Q92922 1105 aaPredicted RBP19.46■□□□□ 0.71
CAPN2-212ENST00000498027 ITGB4P16144 1822 aa19.46■□□□□ 0.71
CAPN2-212ENST00000498027 F6X3S4 739 aa19.45■□□□□ 0.7
CAPN2-212ENST00000498027 PROSER3Q2NL68 480 aa19.45■□□□□ 0.7
CAPN2-212ENST00000498027 KDM2BQ8NHM5 1336 aa19.45■□□□□ 0.7
CAPN2-212ENST00000498027 STARD3NLO95772 234 aa19.44■□□□□ 0.7
CAPN2-212ENST00000498027 SLC4A10Q6U841 1118 aa19.44■□□□□ 0.7
CAPN2-212ENST00000498027 KSR2Q6VAB6 950 aa19.44■□□□□ 0.7
CAPN2-212ENST00000498027 SEPT12Q8IYM1 358 aa19.44■□□□□ 0.7
CAPN2-212ENST00000498027 DNAAF4Q8WXU2 420 aa19.44■□□□□ 0.7
CAPN2-212ENST00000498027 RWDD1Q9H446 243 aaPredicted RBP19.44■□□□□ 0.7
CAPN2-212ENST00000498027 ANXA1P04083 346 aa19.43■□□□□ 0.7
CAPN2-212ENST00000498027 ACSBG1Q96GR2 724 aa19.43■□□□□ 0.7
CAPN2-212ENST00000498027 PCDHB15Q9Y5E8 787 aa19.43■□□□□ 0.7
CAPN2-212ENST00000498027 ATP10DQ9P241 1426 aa19.43■□□□□ 0.7
CAPN2-212ENST00000498027 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
CAPN2-212ENST00000498027 LRP10Q7Z4F1 713 aa19.42■□□□□ 0.7
CAPN2-212ENST00000498027 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
CAPN2-212ENST00000498027 RBM42Q9BTD8 480 aaKnown RBP19.42■□□□□ 0.7
CAPN2-212ENST00000498027 HDAC1Q13547 482 aaPredicted RBP19.42■□□□□ 0.7
CAPN2-212ENST00000498027 ADCY9O60503 1353 aa19.41■□□□□ 0.7
CAPN2-212ENST00000498027 IBTKQ9P2D0 1353 aaPredicted RBP19.41■□□□□ 0.7
CAPN2-212ENST00000498027 MYL6BP14649 208 aa19.41■□□□□ 0.7
CAPN2-212ENST00000498027 RBM6P78332 1123 aaKnown RBP19.41■□□□□ 0.7
CAPN2-212ENST00000498027 XAGE3Q8WTP9 111 aa19.41■□□□□ 0.7
CAPN2-212ENST00000498027 SRCIN1Q9C0H9 1055 aa19.41■□□□□ 0.7
CAPN2-212ENST00000498027 GNAI3P08754 354 aa19.4■□□□□ 0.7
CAPN2-212ENST00000498027 COPS6Q7L5N1 327 aa19.4■□□□□ 0.7
CAPN2-212ENST00000498027 DNAJC10Q8IXB1 793 aa19.4■□□□□ 0.7
CAPN2-212ENST00000498027 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
CAPN2-212ENST00000498027 ALDH1L1O75891 902 aa19.39■□□□□ 0.69
CAPN2-212ENST00000498027 BEND3Q5T5X7 828 aa19.39■□□□□ 0.69
CAPN2-212ENST00000498027 NBPF14Q5TI25 921 aa19.39■□□□□ 0.69
CAPN2-212ENST00000498027 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
CAPN2-212ENST00000498027 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
CAPN2-212ENST00000498027 MAP3K2Q9Y2U5 619 aa19.39■□□□□ 0.69
CAPN2-212ENST00000498027 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
CAPN2-212ENST00000498027 AIMP1Q12904 312 aaKnown RBP19.38■□□□□ 0.69
CAPN2-212ENST00000498027 ANKRD13DQ6ZTN6 518 aa19.38■□□□□ 0.69
CAPN2-212ENST00000498027 RIC3Q7Z5B4 369 aa19.38■□□□□ 0.69
CAPN2-212ENST00000498027 N4BP2Q86UW6 1770 aaPredicted RBP19.38■□□□□ 0.69
CAPN2-212ENST00000498027 KCNQ2O43526 872 aa19.37■□□□□ 0.69
CAPN2-212ENST00000498027 IGHDP01880 384 aa19.37■□□□□ 0.69
CAPN2-212ENST00000498027 A1BGP04217 495 aa19.37■□□□□ 0.69
CAPN2-212ENST00000498027 CYP19A1P11511 503 aaPredicted RBP19.37■□□□□ 0.69
CAPN2-212ENST00000498027 LINS1Q8NG48 757 aa19.37■□□□□ 0.69
CAPN2-212ENST00000498027 SLC4A9Q96Q91 983 aa19.37■□□□□ 0.69
CAPN2-212ENST00000498027 LOC102724428A0A0B4J2F2 783 aa19.36■□□□□ 0.69
CAPN2-212ENST00000498027 SIK1P57059 783 aa19.36■□□□□ 0.69
CAPN2-212ENST00000498027 NEXNQ0ZGT2 675 aa19.36■□□□□ 0.69
CAPN2-212ENST00000498027 RPAP2Q8IXW5 612 aaPredicted RBP19.36■□□□□ 0.69
CAPN2-212ENST00000498027 PLBD2Q8NHP8 589 aa19.36■□□□□ 0.69
CAPN2-212ENST00000498027 MEIS3Q99687 375 aa19.36■□□□□ 0.69
CAPN2-212ENST00000498027 HDAC5Q9UQL6 1122 aa19.36■□□□□ 0.69
CAPN2-212ENST00000498027 CICQ96RK0 1608 aaPredicted RBP19.35■□□□□ 0.69
CAPN2-212ENST00000498027 GNAI2P04899 355 aa19.35■□□□□ 0.69
CAPN2-212ENST00000498027 KCNA4P22459 653 aa19.35■□□□□ 0.69
CAPN2-212ENST00000498027 METTL22Q9BUU2 404 aaPredicted RBP19.35■□□□□ 0.69
CAPN2-212ENST00000498027 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
CAPN2-212ENST00000498027 KRT27Q7Z3Y8 459 aa19.34■□□□□ 0.69
CAPN2-212ENST00000498027 NHSQ6T4R5 1651 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms