RNA–Protein interactions for RNA: ENST00000497816.1

IVD-209, Transcript of isovaleryl-CoA dehydrogenase, human

TSL 1 (best)

Gene IVD, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IVD-209	ENST00000497816	RTF1	Q92541	710 aa	Known RBP	19.43	■□□□□ 0.7
IVD-209	ENST00000497816	COL15A1	P39059	1388 aa		19.43	■□□□□ 0.7
IVD-209	ENST00000497816	KDM3B	Q7LBC6	1761 aa		19.42	■□□□□ 0.7
IVD-209	ENST00000497816	BTBD11	A6QL63	1104 aa		19.42	■□□□□ 0.7
IVD-209	ENST00000497816	KCNQ3	O43525	872 aa		19.42	■□□□□ 0.7
IVD-209	ENST00000497816	FKBP8	Q14318	412 aa		19.42	■□□□□ 0.7
IVD-209	ENST00000497816	SCN7A	Q01118	1682 aa		19.42	■□□□□ 0.7
IVD-209	ENST00000497816	DCTN1	Q14203	1278 aa		19.41	■□□□□ 0.7
IVD-209	ENST00000497816	PXDNL	A1KZ92	1463 aa		19.41	■□□□□ 0.7
IVD-209	ENST00000497816	STARD3NL	O95772	234 aa		19.41	■□□□□ 0.7
IVD-209	ENST00000497816	FMNL2	Q96PY5	1086 aa		19.41	■□□□□ 0.7
IVD-209	ENST00000497816	NRXN2	Q9P2S2	1712 aa		19.4	■□□□□ 0.7
IVD-209	ENST00000497816	LAMB4	A4D0S4	1761 aa		19.4	■□□□□ 0.7
IVD-209	ENST00000497816	MYBBP1A	Q9BQG0	1328 aa	Known RBP	19.4	■□□□□ 0.7
IVD-209	ENST00000497816	DDR1	Q08345	913 aa		19.39	■□□□□ 0.69
IVD-209	ENST00000497816	USPL1	Q5W0Q7	1092 aa		19.39	■□□□□ 0.69
IVD-209	ENST00000497816	TEX13A	Q9BXU3	409 aa	Predicted RBP	19.39	■□□□□ 0.69
IVD-209	ENST00000497816	NARF	Q9UHQ1	456 aa		19.39	■□□□□ 0.69
IVD-209	ENST00000497816	PARP3	Q9Y6F1	533 aa		19.39	■□□□□ 0.69
IVD-209	ENST00000497816	BCOR	Q6W2J9	1755 aa		19.39	■□□□□ 0.69
IVD-209	ENST00000497816	GRIN3B	O60391	1043 aa		19.38	■□□□□ 0.69
IVD-209	ENST00000497816	ZPR1	O75312	459 aa		19.38	■□□□□ 0.69
IVD-209	ENST00000497816	NEFM	P07197	916 aa		19.38	■□□□□ 0.69
IVD-209	ENST00000497816	CANX	P27824	592 aa	Known RBP	19.38	■□□□□ 0.69
IVD-209	ENST00000497816	TM4SF1	P30408	202 aa		19.37	■□□□□ 0.69
IVD-209	ENST00000497816	EIF5	P55010	431 aa	Known RBP	19.37	■□□□□ 0.69
IVD-209	ENST00000497816	NFE2L2	Q16236	605 aa		19.37	■□□□□ 0.69
IVD-209	ENST00000497816	PNN	Q9H307	717 aa	Known RBP	19.36	■□□□□ 0.69
IVD-209	ENST00000497816	BCL2L12	Q9HB09	334 aa		19.36	■□□□□ 0.69
IVD-209	ENST00000497816	ARFGEF1	Q9Y6D6	1849 aa		19.36	■□□□□ 0.69
IVD-209	ENST00000497816	POLRMT	O00411	1230 aa	Known RBP	19.35	■□□□□ 0.69
IVD-209	ENST00000497816	TGFB2	P61812	414 aa		19.35	■□□□□ 0.69
IVD-209	ENST00000497816	MAPK8IP3	Q9UPT6	1336 aa		19.35	■□□□□ 0.69
IVD-209	ENST00000497816	TAF7	Q15545	349 aa	Predicted RBP	19.35	■□□□□ 0.69
IVD-209	ENST00000497816	ZNF784	Q8NCA9	323 aa	Predicted RBP	19.35	■□□□□ 0.69
IVD-209	ENST00000497816	WWC3	Q9ULE0	1092 aa		19.35	■□□□□ 0.69
IVD-209	ENST00000497816	PRAMEF22	A3QJZ6	481 aa		19.34	■□□□□ 0.69
IVD-209	ENST00000497816	A1BG	P04217	495 aa		19.34	■□□□□ 0.69
IVD-209	ENST00000497816	USP16	Q9Y5T5	823 aa		19.34	■□□□□ 0.69
IVD-209	ENST00000497816	DLEC1	Q9Y238	1755 aa		19.33	■□□□□ 0.69
IVD-209	ENST00000497816	IL6ST	P40189	918 aa	Predicted RBP	19.33	■□□□□ 0.68
IVD-209	ENST00000497816	NFIX	Q14938	502 aa		19.33	■□□□□ 0.68
IVD-209	ENST00000497816		A0A087WZG4	1122 aa		19.32	■□□□□ 0.68
IVD-209	ENST00000497816		A0A0G2JLW4	131 aa		19.32	■□□□□ 0.68
IVD-209	ENST00000497816	PRKRIP1	Q9H875	184 aa	Predicted RBP	19.32	■□□□□ 0.68
IVD-209	ENST00000497816	SNRPA1	P09661	255 aa	Known RBP	19.31	■□□□□ 0.68
IVD-209	ENST00000497816	THUMPD2	Q9BTF0	503 aa	Known RBP	19.31	■□□□□ 0.68
IVD-209	ENST00000497816	MIS18A	Q9NYP9	233 aa		19.31	■□□□□ 0.68
IVD-209	ENST00000497816	ANKRD31	Q8N7Z5	1873 aa		19.31	■□□□□ 0.68
IVD-209	ENST00000497816	DPEP1	P16444	411 aa		19.3	■□□□□ 0.68
IVD-209	ENST00000497816	KCNA3	P22001	575 aa		19.3	■□□□□ 0.68
IVD-209	ENST00000497816	ZNF330	Q9Y3S2	320 aa	Predicted RBP	19.3	■□□□□ 0.68
IVD-209	ENST00000497816	PNISR	Q8TF01	805 aa	Known RBP	19.29	■□□□□ 0.68
IVD-209	ENST00000497816	TBC1D2B	Q9UPU7	963 aa		19.29	■□□□□ 0.68
IVD-209	ENST00000497816	PIP4K2A	P48426	406 aa	Predicted RBP	19.28	■□□□□ 0.68
IVD-209	ENST00000497816	CAMTA2	O94983	1202 aa		19.27	■□□□□ 0.68
IVD-209	ENST00000497816	TMPO	P42166	694 aa	Known RBP	19.27	■□□□□ 0.68
IVD-209	ENST00000497816	SERPINB2	P05120	415 aa		19.26	■□□□□ 0.67
IVD-209	ENST00000497816	RIPK4	P57078	832 aa		19.26	■□□□□ 0.67
IVD-209	ENST00000497816	TBC1D9B	Q66K14	1250 aa		19.26	■□□□□ 0.67
IVD-209	ENST00000497816	ADCY9	O60503	1353 aa		19.26	■□□□□ 0.67
IVD-209	ENST00000497816	NBPF26	B4DH59	902 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	EIF4A1	P60842	406 aa	Known RBP	19.25	■□□□□ 0.67
IVD-209	ENST00000497816	NBPF10	Q6P3W6	841 aa	Known RBP	19.25	■□□□□ 0.67
IVD-209	ENST00000497816	CCDC146	Q8IYE0	955 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	NBPF15	Q8N660	670 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	BCS1L	Q9Y276	419 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	CARMIL3	Q8ND23	1372 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	COL11A2	P13942	1736 aa	Predicted RBP	19.25	■□□□□ 0.67
IVD-209	ENST00000497816	CHRNA5	P30532	468 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	WDR43	Q15061	677 aa	Known RBP eCLIP	19.25	■□□□□ 0.67
IVD-209	ENST00000497816	BICDL1	Q6ZP65	573 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	DZIP3	Q86Y13	1208 aa	Known RBP	19.25	■□□□□ 0.67
IVD-209	ENST00000497816	NUP98	P52948	1817 aa		19.25	■□□□□ 0.67
IVD-209	ENST00000497816	GIGYF1	O75420	1035 aa	Predicted RBP	19.24	■□□□□ 0.67
IVD-209	ENST00000497816	NPM2	Q86SE8	214 aa	Known RBP	19.24	■□□□□ 0.67
IVD-209	ENST00000497816	ADAMTS8	Q9UP79	889 aa		19.24	■□□□□ 0.67
IVD-209	ENST00000497816	SBF1	O95248	1867 aa		19.23	■□□□□ 0.67
IVD-209	ENST00000497816	RUNDC1	Q96C34	613 aa		19.23	■□□□□ 0.67
IVD-209	ENST00000497816	PIM2	Q9P1W9	311 aa		19.23	■□□□□ 0.67
IVD-209	ENST00000497816	LMOD3	Q0VAK6	560 aa		19.22	■□□□□ 0.67
IVD-209	ENST00000497816	RRP7A	Q9Y3A4	280 aa	Known RBP	19.22	■□□□□ 0.67
IVD-209	ENST00000497816	ATP10D	Q9P241	1426 aa		19.22	■□□□□ 0.67
IVD-209	ENST00000497816	CACNA1S	Q13698	1873 aa		19.21	■□□□□ 0.67
IVD-209	ENST00000497816	TSPYL4	Q9UJ04	414 aa		19.2	■□□□□ 0.66
IVD-209	ENST00000497816	DALRD3	Q5D0E6	543 aa	Known RBP	19.2	■□□□□ 0.66
IVD-209	ENST00000497816	CLEC4G	Q6UXB4	293 aa		19.2	■□□□□ 0.66
IVD-209	ENST00000497816	BABAM1	Q9NWV8	329 aa		19.2	■□□□□ 0.66
IVD-209	ENST00000497816	TRIM35	Q9UPQ4	493 aa		19.2	■□□□□ 0.66
IVD-209	ENST00000497816	NEUROD2	Q15784	382 aa		19.19	■□□□□ 0.66
IVD-209	ENST00000497816	PRR5L	Q6MZQ0	368 aa		19.19	■□□□□ 0.66
IVD-209	ENST00000497816	SETDB2	Q96T68	719 aa		19.19	■□□□□ 0.66
IVD-209	ENST00000497816	ARFGEF2	Q9Y6D5	1785 aa		19.19	■□□□□ 0.66
IVD-209	ENST00000497816	CCDC88A	Q3V6T2	1871 aa		19.18	■□□□□ 0.66
IVD-209	ENST00000497816	RGL2	O15211	777 aa		19.18	■□□□□ 0.66
IVD-209	ENST00000497816	ARHGAP27	Q6ZUM4	889 aa		19.18	■□□□□ 0.66
IVD-209	ENST00000497816	ZNF652	Q9Y2D9	606 aa		19.17	■□□□□ 0.66
IVD-209	ENST00000497816	ZNF316	A6NFI3	1004 aa	Predicted RBP	19.16	■□□□□ 0.66
IVD-209	ENST00000497816	C2CD5	Q86YS7	1000 aa		19.16	■□□□□ 0.66
IVD-209	ENST00000497816	CCDC24	Q8N4L8	307 aa		19.15	■□□□□ 0.66

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