RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 CRISPLD1Q9H336 500 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 NDFIP2Q9NV92 336 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 USP3Q9Y6I4 520 aa7.02□□□□□ -1.29
PSPC1-205ENST00000497722 USP17L5A8MUK1 530 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 CDK2AP1O14519 115 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 ATP4AP20648 1035 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 HDGFL1Q5TGJ6 251 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 PLEKHM2Q8IWE5 1019 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 CLUAP1Q96AJ1 413 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 OXCT2Q9BYC2 517 aaPredicted RBP7.01□□□□□ -1.29
PSPC1-205ENST00000497722 GPAMQ9HCL2 828 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 DNAAF2Q9NVR5 837 aaKnown RBP7.01□□□□□ -1.29
PSPC1-205ENST00000497722 NOD1Q9Y239 953 aa7.01□□□□□ -1.29
PSPC1-205ENST00000497722 A6NJY4 79 aa7□□□□□ -1.29
PSPC1-205ENST00000497722 PIK3R2O00459 728 aa7□□□□□ -1.29
PSPC1-205ENST00000497722 ZBTB7BO15156 539 aaPredicted RBP7□□□□□ -1.29
PSPC1-205ENST00000497722 MAP2K3P46734 347 aa7□□□□□ -1.29
PSPC1-205ENST00000497722 EPHA4P54764 986 aa7□□□□□ -1.29
PSPC1-205ENST00000497722 GTF2IP78347 998 aa7□□□□□ -1.29
PSPC1-205ENST00000497722 GRIN2CQ14957 1233 aa7□□□□□ -1.29
PSPC1-205ENST00000497722 TBC1D9Q6ZT07 1266 aa7□□□□□ -1.29
PSPC1-205ENST00000497722 DEPDC4Q8N2C3 294 aa6.99□□□□□ -1.29
PSPC1-205ENST00000497722 RUBCNLQ9H714 662 aa6.99□□□□□ -1.29
PSPC1-205ENST00000497722 RRAGCQ9HB90 399 aa6.99□□□□□ -1.29
PSPC1-205ENST00000497722 SERTAD1Q9UHV2 236 aa6.99□□□□□ -1.29
PSPC1-205ENST00000497722 HCN2Q9UL51 889 aa6.99□□□□□ -1.29
PSPC1-205ENST00000497722 GTF2E1P29083 439 aaPredicted RBP6.98□□□□□ -1.29
PSPC1-205ENST00000497722 PLA2G4AP47712 749 aa6.98□□□□□ -1.29
PSPC1-205ENST00000497722 C1orf216Q8TAB5 229 aa6.98□□□□□ -1.29
PSPC1-205ENST00000497722 NIFKQ9BYG3 293 aaKnown RBP6.98□□□□□ -1.29
PSPC1-205ENST00000497722 SEMA6BQ9H3T3 888 aa6.98□□□□□ -1.29
PSPC1-205ENST00000497722 ZNF358Q9NW07 568 aa6.98□□□□□ -1.29
PSPC1-205ENST00000497722 KIAA1024Q9UPX6 916 aa6.98□□□□□ -1.29
PSPC1-205ENST00000497722 SCO2A0A1W2PP80 73 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 USP17L3A6NCW0 530 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 USP17L4A6NCW7 530 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 A6NJR5 290 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 C1QTNF9BB2RNN3 333 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 ATP9BO43861 1147 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 DKK1O94907 266 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 ITGB7P26010 798 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 CLDN10P78369 228 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 USP17L2Q6R6M4 530 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 USP17L1Q7RTZ2 530 aa6.97□□□□□ -1.29
PSPC1-205ENST00000497722 PROSER2Q86WR7 435 aaPredicted RBP6.97□□□□□ -1.29
PSPC1-205ENST00000497722 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.97□□□□□ -1.29
PSPC1-205ENST00000497722 SCHIP1Q9P0W5 487 aaPredicted RBP6.97□□□□□ -1.29
PSPC1-205ENST00000497722 SHISA8B8ZZ34 492 aa6.96□□□□□ -1.3
PSPC1-205ENST00000497722 C2CD2LO14523 706 aa6.96□□□□□ -1.3
PSPC1-205ENST00000497722 BNIP3LO60238 219 aa6.96□□□□□ -1.3
PSPC1-205ENST00000497722 ZDHHC1Q8WTX9 485 aa6.96□□□□□ -1.3
PSPC1-205ENST00000497722 C7orf43Q8WVR3 580 aa6.96□□□□□ -1.3
PSPC1-205ENST00000497722 KRTAP9-9Q9BYP9 154 aa6.96□□□□□ -1.3
PSPC1-205ENST00000497722 KRTAP9-4Q9BYQ2 154 aa6.96□□□□□ -1.3
PSPC1-205ENST00000497722 GDF2Q9UK05 429 aaPredicted RBP6.96□□□□□ -1.3
PSPC1-205ENST00000497722 BACH1O14867 736 aa6.95□□□□□ -1.3
PSPC1-205ENST00000497722 POTEAQ6S8J7 498 aa6.95□□□□□ -1.3
PSPC1-205ENST00000497722 CD163Q86VB7 1156 aa6.95□□□□□ -1.3
PSPC1-205ENST00000497722 NLRP8Q86W28 1048 aa6.95□□□□□ -1.3
PSPC1-205ENST00000497722 ZDHHC3Q9NYG2 299 aa6.95□□□□□ -1.3
PSPC1-205ENST00000497722 ATXN7L1Q9ULK2 861 aaPredicted RBP6.95□□□□□ -1.3
PSPC1-205ENST00000497722 CSB-PGBD3P0DP91 1061 aa6.94□□□□□ -1.3
PSPC1-205ENST00000497722 EFHC2Q5JST6 749 aa6.94□□□□□ -1.3
PSPC1-205ENST00000497722 C1orf229Q6ZS94 237 aaPredicted RBP6.94□□□□□ -1.3
PSPC1-205ENST00000497722 TRIM50Q86XT4 487 aa6.94□□□□□ -1.3
PSPC1-205ENST00000497722 PGBD3Q8N328 593 aa6.94□□□□□ -1.3
PSPC1-205ENST00000497722 GLMNQ92990 594 aa6.94□□□□□ -1.3
PSPC1-205ENST00000497722 KLRG1Q96E93 195 aa6.94□□□□□ -1.3
PSPC1-205ENST00000497722 ZCCHC2Q9C0B9 1178 aaKnown RBP6.94□□□□□ -1.3
PSPC1-205ENST00000497722 PHF24Q9UPV7 400 aa6.94□□□□□ -1.3
PSPC1-205ENST00000497722 GNB5O14775 395 aa6.93□□□□□ -1.3
PSPC1-205ENST00000497722 TEAD4Q15561 434 aa6.93□□□□□ -1.3
PSPC1-205ENST00000497722 SIX5Q8N196 739 aa6.93□□□□□ -1.3
PSPC1-205ENST00000497722 ABHD17AQ96GS6 310 aa6.93□□□□□ -1.3
PSPC1-205ENST00000497722 ZIC5Q96T25 663 aa6.93□□□□□ -1.3
PSPC1-205ENST00000497722 NOP53Q9NZM5 478 aaKnown RBP6.93□□□□□ -1.3
PSPC1-205ENST00000497722 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 A0A1W2PNR3 127 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 M0R2N6 131 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 AMPD1P23109 780 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 TXLNAP40222 546 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 CTBSQ01459 385 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 CCDC102BQ68D86 513 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 LARGE2Q8N3Y3 721 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 OGFOD1Q8N543 542 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 GOLGA6L1Q8N7Z2 621 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 TPCN2Q8NHX9 752 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 EDARADDQ8WWZ3 215 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 SUV39H2Q9H5I1 410 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 CABP1Q9NZU7 370 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 TFIP11Q9UBB9 837 aaKnown RBP6.92□□□□□ -1.3
PSPC1-205ENST00000497722 MKRN1Q9UHC7 482 aaKnown RBP6.92□□□□□ -1.3
PSPC1-205ENST00000497722 PCDHGC4Q9Y5F7 938 aa6.92□□□□□ -1.3
PSPC1-205ENST00000497722 MAFBQ9Y5Q3 323 aaPredicted RBP6.92□□□□□ -1.3
PSPC1-205ENST00000497722 EML1O00423 815 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 FGFR3P22607 806 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 CHRNA4P43681 627 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 ATP1A2P50993 1020 aa6.91□□□□□ -1.3
PSPC1-205ENST00000497722 TNP2Q05952 138 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms