RNA–Protein interactions for RNA: ENST00000497483.1

HDAC10-219, Transcript of histone deacetylase 10, human

TSL 2

Gene HDAC10, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC10-219	ENST00000497483	FKBP8	Q14318	412 aa		33.05	■■■□□ 2.88
HDAC10-219	ENST00000497483	NRXN2	Q9P2S2	1712 aa		33.05	■■■□□ 2.88
HDAC10-219	ENST00000497483	STARD3NL	O95772	234 aa		33.04	■■■□□ 2.88
HDAC10-219	ENST00000497483	TEX13A	Q9BXU3	409 aa	Predicted RBP	33.04	■■■□□ 2.88
HDAC10-219	ENST00000497483	AFDN	P55196	1824 aa	Known RBP	33.03	■■■□□ 2.88
HDAC10-219	ENST00000497483	HTATSF1	O43719	755 aa	Known RBP	33.03	■■■□□ 2.88
HDAC10-219	ENST00000497483	ZPR1	O75312	459 aa		33.03	■■■□□ 2.88
HDAC10-219	ENST00000497483	NARF	Q9UHQ1	456 aa		33.03	■■■□□ 2.88
HDAC10-219	ENST00000497483	RTF1	Q92541	710 aa	Known RBP	33.02	■■■□□ 2.88
HDAC10-219	ENST00000497483	FMNL2	Q96PY5	1086 aa		33.02	■■■□□ 2.88
HDAC10-219	ENST00000497483	BTBD11	A6QL63	1104 aa		33.01	■■■□□ 2.87
HDAC10-219	ENST00000497483	DDR1	Q08345	913 aa		33.01	■■■□□ 2.87
HDAC10-219	ENST00000497483	USPL1	Q5W0Q7	1092 aa		33.01	■■■□□ 2.87
HDAC10-219	ENST00000497483	RALBP1	Q15311	655 aa		33	■■■□□ 2.87
HDAC10-219	ENST00000497483	ARFGEF1	Q9Y6D6	1849 aa		32.99	■■■□□ 2.87
HDAC10-219	ENST00000497483	TM4SF1	P30408	202 aa		32.98	■■■□□ 2.87
HDAC10-219	ENST00000497483	MCM10	Q7L590	875 aa		32.98	■■■□□ 2.87
HDAC10-219	ENST00000497483	POLRMT	O00411	1230 aa	Known RBP	32.97	■■■□□ 2.87
HDAC10-219	ENST00000497483	EIF5	P55010	431 aa	Known RBP	32.97	■■■□□ 2.87
HDAC10-219	ENST00000497483	BCOR	Q6W2J9	1755 aa		32.96	■■■□□ 2.87
HDAC10-219	ENST00000497483	NEFM	P07197	916 aa		32.96	■■■□□ 2.87
HDAC10-219	ENST00000497483	CANX	P27824	592 aa	Known RBP	32.96	■■■□□ 2.87
HDAC10-219	ENST00000497483	PLEKHF1	Q96S99	279 aa		32.96	■■■□□ 2.87
HDAC10-219	ENST00000497483	KDM3B	Q7LBC6	1761 aa		32.96	■■■□□ 2.87
HDAC10-219	ENST00000497483	KCNQ3	O43525	872 aa		32.95	■■■□□ 2.87
HDAC10-219	ENST00000497483	LAMB4	A4D0S4	1761 aa		32.95	■■■□□ 2.87
HDAC10-219	ENST00000497483		A0A087WZG4	1122 aa		32.94	■■■□□ 2.86
HDAC10-219	ENST00000497483	WWC3	Q9ULE0	1092 aa		32.94	■■■□□ 2.86
HDAC10-219	ENST00000497483	ADCY9	O60503	1353 aa		32.94	■■■□□ 2.86
HDAC10-219	ENST00000497483		A0A0G2JLW4	131 aa		32.93	■■■□□ 2.86
HDAC10-219	ENST00000497483	BCL2L12	Q9HB09	334 aa		32.93	■■■□□ 2.86
HDAC10-219	ENST00000497483	DLEC1	Q9Y238	1755 aa		32.92	■■■□□ 2.86
HDAC10-219	ENST00000497483	DPEP1	P16444	411 aa		32.92	■■■□□ 2.86
HDAC10-219	ENST00000497483	IL6ST	P40189	918 aa	Predicted RBP	32.92	■■■□□ 2.86
HDAC10-219	ENST00000497483	DDX10	Q13206	875 aa	Known RBP	32.92	■■■□□ 2.86
HDAC10-219	ENST00000497483	DCTN1	Q14203	1278 aa		32.92	■■■□□ 2.86
HDAC10-219	ENST00000497483	NFIX	Q14938	502 aa		32.91	■■■□□ 2.86
HDAC10-219	ENST00000497483	PNN	Q9H307	717 aa	Known RBP	32.91	■■■□□ 2.86
HDAC10-219	ENST00000497483	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.88	■■■□□ 2.85
HDAC10-219	ENST00000497483	KCNA3	P22001	575 aa		32.88	■■■□□ 2.85
HDAC10-219	ENST00000497483	NFE2L2	Q16236	605 aa		32.88	■■■□□ 2.85
HDAC10-219	ENST00000497483	ATP10D	Q9P241	1426 aa		32.87	■■■□□ 2.85
HDAC10-219	ENST00000497483	TAF7	Q15545	349 aa	Predicted RBP	32.87	■■■□□ 2.85
HDAC10-219	ENST00000497483	BCS1L	Q9Y276	419 aa		32.87	■■■□□ 2.85
HDAC10-219	ENST00000497483	MAPK8IP3	Q9UPT6	1336 aa		32.86	■■■□□ 2.85
HDAC10-219	ENST00000497483	SNRPA1	P09661	255 aa	Known RBP	32.86	■■■□□ 2.85
HDAC10-219	ENST00000497483	A1BG	P04217	495 aa		32.84	■■■□□ 2.85
HDAC10-219	ENST00000497483	USP16	Q9Y5T5	823 aa		32.84	■■■□□ 2.85
HDAC10-219	ENST00000497483	PIM2	Q9P1W9	311 aa		32.83	■■■□□ 2.85
HDAC10-219	ENST00000497483	SERPINB2	P05120	415 aa		32.82	■■■□□ 2.84
HDAC10-219	ENST00000497483	ANKRD31	Q8N7Z5	1873 aa		32.82	■■■□□ 2.84
HDAC10-219	ENST00000497483	PRAMEF22	A3QJZ6	481 aa		32.81	■■■□□ 2.84
HDAC10-219	ENST00000497483	PNISR	Q8TF01	805 aa	Known RBP	32.81	■■■□□ 2.84
HDAC10-219	ENST00000497483	ZNF330	Q9Y3S2	320 aa	Predicted RBP	32.81	■■■□□ 2.84
HDAC10-219	ENST00000497483	NPM2	Q86SE8	214 aa	Known RBP	32.8	■■■□□ 2.84
HDAC10-219	ENST00000497483	TBC1D2B	Q9UPU7	963 aa		32.8	■■■□□ 2.84
HDAC10-219	ENST00000497483	CAMTA2	O94983	1202 aa		32.78	■■■□□ 2.84
HDAC10-219	ENST00000497483	TBC1D9B	Q66K14	1250 aa		32.78	■■■□□ 2.84
HDAC10-219	ENST00000497483	CARMIL3	Q8ND23	1372 aa		32.78	■■■□□ 2.84
HDAC10-219	ENST00000497483	GIGYF1	O75420	1035 aa	Predicted RBP	32.77	■■■□□ 2.84
HDAC10-219	ENST00000497483	CHRNA5	P30532	468 aa		32.77	■■■□□ 2.84
HDAC10-219	ENST00000497483	DALRD3	Q5D0E6	543 aa	Known RBP	32.76	■■■□□ 2.83
HDAC10-219	ENST00000497483	DZIP3	Q86Y13	1208 aa	Known RBP	32.76	■■■□□ 2.83
HDAC10-219	ENST00000497483	BICDL1	Q6ZP65	573 aa		32.74	■■■□□ 2.83
HDAC10-219	ENST00000497483	MIS18A	Q9NYP9	233 aa		32.74	■■■□□ 2.83
HDAC10-219	ENST00000497483	COL11A2	P13942	1736 aa	Predicted RBP	32.74	■■■□□ 2.83
HDAC10-219	ENST00000497483	C1QTNF8	P60827	252 aa		32.73	■■■□□ 2.83
HDAC10-219	ENST00000497483	THUMPD2	Q9BTF0	503 aa	Known RBP	32.73	■■■□□ 2.83
HDAC10-219	ENST00000497483	RGL2	O15211	777 aa		32.72	■■■□□ 2.83
HDAC10-219	ENST00000497483	PIP4K2A	P48426	406 aa	Predicted RBP	32.72	■■■□□ 2.83
HDAC10-219	ENST00000497483	ARHGAP27	Q6ZUM4	889 aa		32.72	■■■□□ 2.83
HDAC10-219	ENST00000497483	SBF1	O95248	1867 aa		32.71	■■■□□ 2.83
HDAC10-219	ENST00000497483	NBPF26	B4DH59	902 aa		32.71	■■■□□ 2.83
HDAC10-219	ENST00000497483	NBPF10	Q6P3W6	841 aa	Known RBP	32.71	■■■□□ 2.83
HDAC10-219	ENST00000497483	NBPF15	Q8N660	670 aa		32.71	■■■□□ 2.83
HDAC10-219	ENST00000497483	EIF4A1	P60842	406 aa	Known RBP	32.7	■■■□□ 2.83
HDAC10-219	ENST00000497483	CLEC4G	Q6UXB4	293 aa		32.7	■■■□□ 2.83
HDAC10-219	ENST00000497483	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.69	■■■□□ 2.82
HDAC10-219	ENST00000497483	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.69	■■■□□ 2.82
HDAC10-219	ENST00000497483	RIPK4	P57078	832 aa		32.68	■■■□□ 2.82
HDAC10-219	ENST00000497483	LMOD3	Q0VAK6	560 aa		32.68	■■■□□ 2.82
HDAC10-219	ENST00000497483	PRR5L	Q6MZQ0	368 aa		32.68	■■■□□ 2.82
HDAC10-219	ENST00000497483	TMPO	P42166	694 aa	Known RBP	32.67	■■■□□ 2.82
HDAC10-219	ENST00000497483	SETDB2	Q96T68	719 aa		32.67	■■■□□ 2.82
HDAC10-219	ENST00000497483	PDZRN3	Q9UPQ7	1066 aa		32.67	■■■□□ 2.82
HDAC10-219	ENST00000497483	ZNF652	Q9Y2D9	606 aa		32.67	■■■□□ 2.82
HDAC10-219	ENST00000497483	ARFGEF2	Q9Y6D5	1785 aa		32.66	■■■□□ 2.82
HDAC10-219	ENST00000497483	C2CD5	Q86YS7	1000 aa		32.65	■■■□□ 2.82
HDAC10-219	ENST00000497483	BRIP1	Q9BX63	1249 aa		32.65	■■■□□ 2.82
HDAC10-219	ENST00000497483	BABAM1	Q9NWV8	329 aa		32.65	■■■□□ 2.82
HDAC10-219	ENST00000497483		H0YIN7	160 aa		32.64	■■■□□ 2.82
HDAC10-219	ENST00000497483	NUP98	P52948	1817 aa		32.64	■■■□□ 2.82
HDAC10-219	ENST00000497483	WDR43	Q15061	677 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
HDAC10-219	ENST00000497483	CNBD1	Q8NA66	436 aa		32.64	■■■□□ 2.82
HDAC10-219	ENST00000497483	PDE6B	P35913	854 aa		32.63	■■■□□ 2.81
HDAC10-219	ENST00000497483	ZEB1	P37275	1124 aa	Predicted RBP	32.62	■■■□□ 2.81
HDAC10-219	ENST00000497483	TTLL6	Q8N841	843 aa		32.62	■■■□□ 2.81
HDAC10-219	ENST00000497483	ZNF526	Q8TF50	670 aa	Predicted RBP	32.61	■■■□□ 2.81
HDAC10-219	ENST00000497483	RUNDC1	Q96C34	613 aa		32.61	■■■□□ 2.81
HDAC10-219	ENST00000497483	TSPYL4	Q9UJ04	414 aa		32.61	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms