RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 DDR1Q08345 913 aa19.11■□□□□ 0.65
VTI1A-209ENST00000496445 ZNF790Q6PG37 636 aa19.11■□□□□ 0.65
VTI1A-209ENST00000496445 TTC5Q8N0Z6 440 aa19.11■□□□□ 0.65
VTI1A-209ENST00000496445 ARFGEF1Q9Y6D6 1849 aa19.1■□□□□ 0.65
VTI1A-209ENST00000496445 ZNF496Q96IT1 587 aaPredicted RBP19.1■□□□□ 0.65
VTI1A-209ENST00000496445 PARP3Q9Y6F1 533 aa19.1■□□□□ 0.65
VTI1A-209ENST00000496445 ADCY9O60503 1353 aa19.09■□□□□ 0.65
VTI1A-209ENST00000496445 USPL1Q5W0Q7 1092 aa19.09■□□□□ 0.65
VTI1A-209ENST00000496445 BCORQ6W2J9 1755 aa19.09■□□□□ 0.65
VTI1A-209ENST00000496445 FCHSD2O94868 740 aa19.08■□□□□ 0.64
VTI1A-209ENST00000496445 TGFB2P61812 414 aa19.08■□□□□ 0.64
VTI1A-209ENST00000496445 DLEC1Q9Y238 1755 aa19.07■□□□□ 0.64
VTI1A-209ENST00000496445 POLRMTO00411 1230 aaKnown RBP19.07■□□□□ 0.64
VTI1A-209ENST00000496445 KCNQ3O43525 872 aa19.07■□□□□ 0.64
VTI1A-209ENST00000496445 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
VTI1A-209ENST00000496445 NARFQ9UHQ1 456 aa19.07■□□□□ 0.64
VTI1A-209ENST00000496445 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
VTI1A-209ENST00000496445 A0A0G2JLW4 131 aa19.06■□□□□ 0.64
VTI1A-209ENST00000496445 ZPR1O75312 459 aa19.06■□□□□ 0.64
VTI1A-209ENST00000496445 TM4SF1P30408 202 aa19.06■□□□□ 0.64
VTI1A-209ENST00000496445 MCM10Q7L590 875 aa19.06■□□□□ 0.64
VTI1A-209ENST00000496445 LAMB4A4D0S4 1761 aa19.06■□□□□ 0.64
VTI1A-209ENST00000496445 KDM3BQ7LBC6 1761 aa19.06■□□□□ 0.64
VTI1A-209ENST00000496445 DPEP1P16444 411 aa19.05■□□□□ 0.64
VTI1A-209ENST00000496445 CANXP27824 592 aaKnown RBP19.05■□□□□ 0.64
VTI1A-209ENST00000496445 BTBD11A6QL63 1104 aa19.04■□□□□ 0.64
VTI1A-209ENST00000496445 STARD3NLO95772 234 aa19.04■□□□□ 0.64
VTI1A-209ENST00000496445 EIF5P55010 431 aaKnown RBP19.04■□□□□ 0.64
VTI1A-209ENST00000496445 DCTN1Q14203 1278 aa19.04■□□□□ 0.64
VTI1A-209ENST00000496445 FMNL2Q96PY5 1086 aa19.04■□□□□ 0.64
VTI1A-209ENST00000496445 KCNA3P22001 575 aa19.03■□□□□ 0.64
VTI1A-209ENST00000496445 NFIXQ14938 502 aa19.03■□□□□ 0.64
VTI1A-209ENST00000496445 RTF1Q92541 710 aaKnown RBP19.02■□□□□ 0.64
VTI1A-209ENST00000496445 PLEKHF1Q96S99 279 aa19.02■□□□□ 0.64
VTI1A-209ENST00000496445 ANKRD31Q8N7Z5 1873 aa19.02■□□□□ 0.64
VTI1A-209ENST00000496445 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
VTI1A-209ENST00000496445 BCS1LQ9Y276 419 aa19.01■□□□□ 0.63
VTI1A-209ENST00000496445 PRAMEF22A3QJZ6 481 aa19■□□□□ 0.63
VTI1A-209ENST00000496445 HTATSF1O43719 755 aaKnown RBP19■□□□□ 0.63
VTI1A-209ENST00000496445 CARMIL3Q8ND23 1372 aa19■□□□□ 0.63
VTI1A-209ENST00000496445 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
VTI1A-209ENST00000496445 A1BGP04217 495 aa18.99■□□□□ 0.63
VTI1A-209ENST00000496445 IL6STP40189 918 aaPredicted RBP18.99■□□□□ 0.63
VTI1A-209ENST00000496445 A0A087WZG4 1122 aa18.98■□□□□ 0.63
VTI1A-209ENST00000496445 GIGYF1O75420 1035 aaPredicted RBP18.98■□□□□ 0.63
VTI1A-209ENST00000496445 CHRNA5P30532 468 aa18.98■□□□□ 0.63
VTI1A-209ENST00000496445 C1QTNF8P60827 252 aa18.98■□□□□ 0.63
VTI1A-209ENST00000496445 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
VTI1A-209ENST00000496445 RALBP1Q15311 655 aa18.97■□□□□ 0.63
VTI1A-209ENST00000496445 ZNF330Q9Y3S2 320 aaPredicted RBP18.97■□□□□ 0.63
VTI1A-209ENST00000496445 SERPINB2P05120 415 aa18.96■□□□□ 0.63
VTI1A-209ENST00000496445 PIP4K2AP48426 406 aaPredicted RBP18.96■□□□□ 0.63
VTI1A-209ENST00000496445 DDX10Q13206 875 aaKnown RBP18.96■□□□□ 0.63
VTI1A-209ENST00000496445 TBC1D9BQ66K14 1250 aa18.96■□□□□ 0.63
VTI1A-209ENST00000496445 PIM2Q9P1W9 311 aa18.96■□□□□ 0.63
VTI1A-209ENST00000496445 TBC1D2BQ9UPU7 963 aa18.96■□□□□ 0.63
VTI1A-209ENST00000496445 SBF1O95248 1867 aa18.96■□□□□ 0.63
VTI1A-209ENST00000496445 CAMTA2O94983 1202 aa18.95■□□□□ 0.62
VTI1A-209ENST00000496445 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
VTI1A-209ENST00000496445 CEP350Q5VT06 3117 aa18.95■□□□□ 0.62
VTI1A-209ENST00000496445 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
VTI1A-209ENST00000496445 TAF7Q15545 349 aaPredicted RBP18.94■□□□□ 0.62
VTI1A-209ENST00000496445 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
VTI1A-209ENST00000496445 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
VTI1A-209ENST00000496445 DALRD3Q5D0E6 543 aaKnown RBP18.93■□□□□ 0.62
VTI1A-209ENST00000496445 ARHGAP27Q6ZUM4 889 aa18.93■□□□□ 0.62
VTI1A-209ENST00000496445 ZNF526Q8TF50 670 aaPredicted RBP18.93■□□□□ 0.62
VTI1A-209ENST00000496445 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
VTI1A-209ENST00000496445 NEFMP07197 916 aa18.92■□□□□ 0.62
VTI1A-209ENST00000496445 GPBP1L1Q9HC44 474 aaPredicted RBP18.92■□□□□ 0.62
VTI1A-209ENST00000496445 MYBBP1AQ9BQG0 1328 aaKnown RBP18.92■□□□□ 0.62
VTI1A-209ENST00000496445 MAPK8IP3Q9UPT6 1336 aa18.92■□□□□ 0.62
VTI1A-209ENST00000496445 CACNA1SQ13698 1873 aa18.92■□□□□ 0.62
VTI1A-209ENST00000496445 NBPF26B4DH59 902 aa18.91■□□□□ 0.62
VTI1A-209ENST00000496445 NBPF10Q6P3W6 841 aaKnown RBP18.91■□□□□ 0.62
VTI1A-209ENST00000496445 DZIP3Q86Y13 1208 aaKnown RBP18.91■□□□□ 0.62
VTI1A-209ENST00000496445 NBPF15Q8N660 670 aa18.91■□□□□ 0.62
VTI1A-209ENST00000496445 ARFGEF2Q9Y6D5 1785 aa18.91■□□□□ 0.62
VTI1A-209ENST00000496445 PRR5LQ6MZQ0 368 aa18.9■□□□□ 0.62
VTI1A-209ENST00000496445 TIAM2Q8IVF5 1701 aa18.88■□□□□ 0.61
VTI1A-209ENST00000496445 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
VTI1A-209ENST00000496445 CCDC24Q8N4L8 307 aa18.88■□□□□ 0.61
VTI1A-209ENST00000496445 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
VTI1A-209ENST00000496445 NUP98P52948 1817 aa18.88■□□□□ 0.61
VTI1A-209ENST00000496445 CCDC88AQ3V6T2 1871 aa18.88■□□□□ 0.61
VTI1A-209ENST00000496445 SENP3-EIF4A1A0A087X0R7 540 aa18.87■□□□□ 0.61
VTI1A-209ENST00000496445 EIF4A1P60842 406 aaKnown RBP18.87■□□□□ 0.61
VTI1A-209ENST00000496445 NPM2Q86SE8 214 aaKnown RBP18.87■□□□□ 0.61
VTI1A-209ENST00000496445 PNISRQ8TF01 805 aaKnown RBP18.87■□□□□ 0.61
VTI1A-209ENST00000496445 C9orf131Q5VYM1 1079 aa18.86■□□□□ 0.61
VTI1A-209ENST00000496445 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
VTI1A-209ENST00000496445 KIF3CO14782 793 aa18.85■□□□□ 0.61
VTI1A-209ENST00000496445 SETDB2Q96T68 719 aa18.85■□□□□ 0.61
VTI1A-209ENST00000496445 TNRC6CQ9HCJ0 1690 aaKnown RBP18.85■□□□□ 0.61
VTI1A-209ENST00000496445 H0YIN7 160 aa18.84■□□□□ 0.61
VTI1A-209ENST00000496445 RIPK4P57078 832 aa18.84■□□□□ 0.61
VTI1A-209ENST00000496445 RASSF7Q02833 373 aa18.84■□□□□ 0.61
VTI1A-209ENST00000496445 CLEC4GQ6UXB4 293 aa18.84■□□□□ 0.61
VTI1A-209ENST00000496445 TTLL6Q8N841 843 aa18.84■□□□□ 0.61
VTI1A-209ENST00000496445 CNBD1Q8NA66 436 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms