RNA–Protein interactions for RNA: ENST00000496360.5

MACF1-223, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 2,080 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-223ENST00000496360 CDK12Q9NYV4 1490 aaPredicted RBP18.09■□□□□ 0.49
MACF1-223ENST00000496360 CUL4AQ13619 759 aa18.09■□□□□ 0.49
MACF1-223ENST00000496360 ZGPATQ8N5A5 531 aaKnown RBP18.09■□□□□ 0.49
MACF1-223ENST00000496360 TRPC5Q9UL62 973 aaPredicted RBP18.09■□□□□ 0.49
MACF1-223ENST00000496360 ABCA3Q99758 1704 aa18.09■□□□□ 0.49
MACF1-223ENST00000496360 TMEM87AQ8NBN3 555 aa18.08■□□□□ 0.49
MACF1-223ENST00000496360 DCTPP1Q9H773 170 aa18.08■□□□□ 0.48
MACF1-223ENST00000496360 ATRNO75882 1429 aa18.07■□□□□ 0.48
MACF1-223ENST00000496360 NSFL1CQ9UNZ2 370 aaKnown RBP18.07■□□□□ 0.48
MACF1-223ENST00000496360 BCL9LQ86UU0 1499 aa18.07■□□□□ 0.48
MACF1-223ENST00000496360 GOLGA6L6A8MZA4 724 aa18.07■□□□□ 0.48
MACF1-223ENST00000496360 CCDC183Q5T5S1 534 aa18.07■□□□□ 0.48
MACF1-223ENST00000496360 CREBRFQ8IUR6 639 aa18.07■□□□□ 0.48
MACF1-223ENST00000496360 SLC12A5Q9H2X9 1139 aa18.07■□□□□ 0.48
MACF1-223ENST00000496360 SIRT2Q8IXJ6 389 aa18.06■□□□□ 0.48
MACF1-223ENST00000496360 MRPL50Q8N5N7 158 aaKnown RBP18.06■□□□□ 0.48
MACF1-223ENST00000496360 KIAA1524Q8TCG1 905 aa18.06■□□□□ 0.48
MACF1-223ENST00000496360 API5Q9BZZ5 524 aaKnown RBP18.06■□□□□ 0.48
MACF1-223ENST00000496360 USP25Q9UHP3 1055 aa18.06■□□□□ 0.48
MACF1-223ENST00000496360 SLIT2O94813 1529 aa18.06■□□□□ 0.48
MACF1-223ENST00000496360 CCDC66A2RUB6 948 aa18.05■□□□□ 0.48
MACF1-223ENST00000496360 ADCY5O95622 1261 aa18.05■□□□□ 0.48
MACF1-223ENST00000496360 ERC2O15083 957 aa18.05■□□□□ 0.48
MACF1-223ENST00000496360 TMEM51Q9NW97 253 aa18.05■□□□□ 0.48
MACF1-223ENST00000496360 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
MACF1-223ENST00000496360 KDM4AO75164 1064 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 ANAPC15P60006 121 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 SLC20A2Q08357 652 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 UNC5CLQ8IV45 518 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 IPO4Q8TEX9 1081 aaKnown RBP18.03■□□□□ 0.48
MACF1-223ENST00000496360 IL17RAQ96F46 866 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 CGNQ9P2M7 1197 aaKnown RBP18.03■□□□□ 0.48
MACF1-223ENST00000496360 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.03■□□□□ 0.48
MACF1-223ENST00000496360 TMX3Q96JJ7 454 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 WDR33Q9C0J8 1336 aaKnown RBP18.03■□□□□ 0.48
MACF1-223ENST00000496360 RGS12O14924 1447 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 CRYBG1Q9Y4K1 1723 aa18.03■□□□□ 0.48
MACF1-223ENST00000496360 ZNF771Q7L3S4 317 aaPredicted RBP18.02■□□□□ 0.48
MACF1-223ENST00000496360 RIOK3O14730 519 aaKnown RBP18.02■□□□□ 0.47
MACF1-223ENST00000496360 EPB41L2O43491 1005 aaKnown RBP18.01■□□□□ 0.47
MACF1-223ENST00000496360 MX1P20591 662 aa18.01■□□□□ 0.47
MACF1-223ENST00000496360 MCCP23508 829 aa18.01■□□□□ 0.47
MACF1-223ENST00000496360 TSC1Q92574 1164 aa18.01■□□□□ 0.47
MACF1-223ENST00000496360 TTC12Q9H892 705 aaPredicted RBP18.01■□□□□ 0.47
MACF1-223ENST00000496360 PLCH1Q4KWH8 1693 aa18.01■□□□□ 0.47
MACF1-223ENST00000496360 FAM83GA6ND36 823 aa18■□□□□ 0.47
MACF1-223ENST00000496360 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
MACF1-223ENST00000496360 NWD2Q9ULI1 1742 aa18■□□□□ 0.47
MACF1-223ENST00000496360 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
MACF1-223ENST00000496360 USP6P35125 1406 aa18■□□□□ 0.47
MACF1-223ENST00000496360 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
MACF1-223ENST00000496360 VAMP4O75379 141 aa18■□□□□ 0.47
MACF1-223ENST00000496360 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
MACF1-223ENST00000496360 ABTB2Q8N961 1025 aa18■□□□□ 0.47
MACF1-223ENST00000496360 GJD4Q96KN9 370 aaPredicted RBP18■□□□□ 0.47
MACF1-223ENST00000496360 RTL1A6NKG5 1358 aa17.99■□□□□ 0.47
MACF1-223ENST00000496360 FCHSD2O94868 740 aa17.99■□□□□ 0.47
MACF1-223ENST00000496360 SDSP20132 328 aa17.99■□□□□ 0.47
MACF1-223ENST00000496360 U2AF2P26368 475 aaKnown RBP eCLIP17.99■□□□□ 0.471e-9■■■■□ 19.7
MACF1-223ENST00000496360 SSH2Q76I76 1423 aa17.99■□□□□ 0.47
MACF1-223ENST00000496360 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
MACF1-223ENST00000496360 SPDYE4A6NLX3 237 aa17.98■□□□□ 0.47
MACF1-223ENST00000496360 SMTNL1A8MU46 457 aa17.98■□□□□ 0.47
MACF1-223ENST00000496360 ANKRD44Q8N8A2 993 aa17.98■□□□□ 0.47
MACF1-223ENST00000496360 MORC2Q9Y6X9 1032 aaPredicted RBP17.98■□□□□ 0.47
MACF1-223ENST00000496360 PHRF1Q9P1Y6 1649 aaKnown RBP17.98■□□□□ 0.47
MACF1-223ENST00000496360 CDK11BP21127 795 aaKnown RBP17.97■□□□□ 0.47
MACF1-223ENST00000496360 GNAI1P63096 354 aa17.97■□□□□ 0.47
MACF1-223ENST00000496360 ZNF830Q96NB3 372 aaPredicted RBP17.97■□□□□ 0.47
MACF1-223ENST00000496360 OSBPL3Q9H4L5 887 aa17.97■□□□□ 0.47
MACF1-223ENST00000496360 CTNNA3Q9UI47 895 aa17.97■□□□□ 0.47
MACF1-223ENST00000496360 DDX41Q9UJV9 622 aaKnown RBP17.97■□□□□ 0.47
MACF1-223ENST00000496360 COL14A1Q05707 1796 aaKnown RBP17.97■□□□□ 0.47
MACF1-223ENST00000496360 VPS72Q15906 364 aa17.97■□□□□ 0.47
MACF1-223ENST00000496360 JARID2Q92833 1246 aaPredicted RBP17.97■□□□□ 0.47
MACF1-223ENST00000496360 C1orf115Q9H7X2 142 aa17.97■□□□□ 0.47
MACF1-223ENST00000496360 IFT57Q9NWB7 429 aa17.97■□□□□ 0.47
MACF1-223ENST00000496360 PAXBP1Q9Y5B6 917 aa17.97■□□□□ 0.47
MACF1-223ENST00000496360 NEK4P51957 841 aa17.96■□□□□ 0.47
MACF1-223ENST00000496360 UBE2HP62256 183 aa17.96■□□□□ 0.47
MACF1-223ENST00000496360 USP48Q86UV5 1035 aa17.96■□□□□ 0.47
MACF1-223ENST00000496360 TSPYL1Q9H0U9 437 aa17.96■□□□□ 0.47
MACF1-223ENST00000496360 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
MACF1-223ENST00000496360 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
MACF1-223ENST00000496360 BTG4Q9NY30 223 aa17.95■□□□□ 0.46
MACF1-223ENST00000496360 ATP6V1DQ9Y5K8 247 aa17.95■□□□□ 0.46
MACF1-223ENST00000496360 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
MACF1-223ENST00000496360 GLI3P10071 1580 aa17.95■□□□□ 0.46
MACF1-223ENST00000496360 NCBP1Q09161 790 aaKnown RBP17.94■□□□□ 0.46
MACF1-223ENST00000496360 AKAP12Q02952 1782 aa17.94■□□□□ 0.46
MACF1-223ENST00000496360 CPSF1Q10570 1443 aaKnown RBP17.94■□□□□ 0.46
MACF1-223ENST00000496360 RPAP1Q9BWH6 1393 aaPredicted RBP17.94■□□□□ 0.46
MACF1-223ENST00000496360 SLFN14P0C7P3 912 aa17.94■□□□□ 0.46
MACF1-223ENST00000496360 DNAJC2Q99543 621 aaKnown RBP17.94■□□□□ 0.46
MACF1-223ENST00000496360 NRAPQ86VF7 1730 aa17.94■□□□□ 0.46
MACF1-223ENST00000496360 NRKQ7Z2Y5 1582 aa17.93■□□□□ 0.46
MACF1-223ENST00000496360 ZC3H6P61129 1189 aaKnown RBP17.93■□□□□ 0.46
MACF1-223ENST00000496360 FUCA2Q9BTY2 467 aa17.93■□□□□ 0.46
MACF1-223ENST00000496360 CALCOCO1Q9P1Z2 691 aa17.93■□□□□ 0.46
MACF1-223ENST00000496360 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms