RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 SLFN5Q08AF3 891 aa14.36□□□□□ -0.11
KDM1A-205ENST00000494920 SLC15A2Q16348 729 aa14.36□□□□□ -0.11
KDM1A-205ENST00000494920 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
KDM1A-205ENST00000494920 LAS1LQ9Y4W2 734 aaKnown RBP14.36□□□□□ -0.11
KDM1A-205ENST00000494920 USP16Q9Y5T5 823 aa14.36□□□□□ -0.11
KDM1A-205ENST00000494920 HOXB7P09629 217 aa14.35□□□□□ -0.11
KDM1A-205ENST00000494920 CRKLP46109 303 aaKnown RBP14.35□□□□□ -0.11
KDM1A-205ENST00000494920 GOLGA2Q08379 1002 aa14.35□□□□□ -0.11
KDM1A-205ENST00000494920 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
KDM1A-205ENST00000494920 TEX13AQ9BXU3 409 aaPredicted RBP14.35□□□□□ -0.11
KDM1A-205ENST00000494920 ZBTB1Q9Y2K1 713 aa14.35□□□□□ -0.11
KDM1A-205ENST00000494920 E9PSI1 815 aa14.34□□□□□ -0.11
KDM1A-205ENST00000494920 C8orf58Q8NAV2 365 aa14.34□□□□□ -0.11
KDM1A-205ENST00000494920 CCDC87Q9NVE4 849 aa14.34□□□□□ -0.11
KDM1A-205ENST00000494920 CACNA1FO60840 1977 aa14.34□□□□□ -0.11
KDM1A-205ENST00000494920 SOS1Q07889 1333 aaPredicted RBP14.34□□□□□ -0.11
KDM1A-205ENST00000494920 PNPLA7Q6ZV29 1317 aa14.34□□□□□ -0.11
KDM1A-205ENST00000494920 BCORQ6W2J9 1755 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 NBPF26B4DH59 902 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 HMGB2P26583 209 aaKnown RBP14.33□□□□□ -0.12
KDM1A-205ENST00000494920 NBPF14Q5TI25 921 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 NBPF10Q6P3W6 841 aaKnown RBP14.33□□□□□ -0.12
KDM1A-205ENST00000494920 LRP10Q7Z4F1 713 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 NBPF15Q8N660 670 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 TSPYL6Q8N831 410 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 SCN7AQ01118 1682 aa14.33□□□□□ -0.12
KDM1A-205ENST00000494920 RPS6KA4O75676 772 aa14.32□□□□□ -0.12
KDM1A-205ENST00000494920 STARD3NLO95772 234 aa14.32□□□□□ -0.12
KDM1A-205ENST00000494920 EIF5P55010 431 aaKnown RBP14.32□□□□□ -0.12
KDM1A-205ENST00000494920 MYH16Q9H6N6 1097 aa14.32□□□□□ -0.12
KDM1A-205ENST00000494920 STK32BQ9NY57 414 aa14.32□□□□□ -0.12
KDM1A-205ENST00000494920 ERBB4Q15303 1308 aa14.32□□□□□ -0.12
KDM1A-205ENST00000494920 A1BGP04217 495 aa14.31□□□□□ -0.12
KDM1A-205ENST00000494920 SSFA2P28290 1259 aa14.31□□□□□ -0.12
KDM1A-205ENST00000494920 EXOSC9Q06265 439 aaKnown RBP14.31□□□□□ -0.12
KDM1A-205ENST00000494920 PDIA6Q15084 440 aa14.31□□□□□ -0.12
KDM1A-205ENST00000494920 SMIM5Q71RC9 77 aa14.31□□□□□ -0.12
KDM1A-205ENST00000494920 AK7Q96M32 723 aa14.31□□□□□ -0.12
KDM1A-205ENST00000494920 PDGFDQ9GZP0 370 aaPredicted RBP14.31□□□□□ -0.12
KDM1A-205ENST00000494920 GNPATO15228 680 aa14.3□□□□□ -0.12
KDM1A-205ENST00000494920 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
KDM1A-205ENST00000494920 COL15A1P39059 1388 aa14.3□□□□□ -0.12
KDM1A-205ENST00000494920 VAMP4O75379 141 aa14.29□□□□□ -0.12
KDM1A-205ENST00000494920 ADRA2BP18089 450 aa14.29□□□□□ -0.12
KDM1A-205ENST00000494920 IL6STP40189 918 aaPredicted RBP14.29□□□□□ -0.12
KDM1A-205ENST00000494920 PROSER3Q2NL68 480 aa14.29□□□□□ -0.12
KDM1A-205ENST00000494920 COL23A1Q86Y22 540 aaPredicted RBP14.29□□□□□ -0.12
KDM1A-205ENST00000494920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
KDM1A-205ENST00000494920 PIP4K2AP48426 406 aaPredicted RBP14.28□□□□□ -0.12
KDM1A-205ENST00000494920 TWISTNBQ3B726 338 aaPredicted RBP14.28□□□□□ -0.12
KDM1A-205ENST00000494920 TFCP2L1Q9NZI6 479 aa14.28□□□□□ -0.12
KDM1A-205ENST00000494920 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
KDM1A-205ENST00000494920 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.13
KDM1A-205ENST00000494920 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
KDM1A-205ENST00000494920 HDGFL1Q5TGJ6 251 aa14.27□□□□□ -0.13
KDM1A-205ENST00000494920 EIF2S2P20042 333 aaKnown RBP14.26□□□□□ -0.13
KDM1A-205ENST00000494920 CANXP27824 592 aaKnown RBP14.26□□□□□ -0.13
KDM1A-205ENST00000494920 FLAD1Q8NFF5 587 aa14.26□□□□□ -0.13
KDM1A-205ENST00000494920 ARHGEF1Q92888 912 aaKnown RBP14.26□□□□□ -0.13
KDM1A-205ENST00000494920 DDX21Q9NR30 783 aaKnown RBP eCLIP14.26□□□□□ -0.13
KDM1A-205ENST00000494920 CHPF2Q9P2E5 772 aa14.26□□□□□ -0.13
KDM1A-205ENST00000494920 NUP98P52948 1817 aa14.26□□□□□ -0.13
KDM1A-205ENST00000494920 USP42Q9H9J4 1324 aaKnown RBP14.25□□□□□ -0.13
KDM1A-205ENST00000494920 ANXA1P04083 346 aa14.25□□□□□ -0.13
KDM1A-205ENST00000494920 PHF14O94880 888 aa14.24□□□□□ -0.13
KDM1A-205ENST00000494920 TRAPPC3LQ5T215 181 aa14.24□□□□□ -0.13
KDM1A-205ENST00000494920 NECTIN2Q92692 538 aa14.24□□□□□ -0.13
KDM1A-205ENST00000494920 BCL2L12Q9HB09 334 aa14.24□□□□□ -0.13
KDM1A-205ENST00000494920 NARFQ9UHQ1 456 aa14.24□□□□□ -0.13
KDM1A-205ENST00000494920 ANKRD36CQ5JPF3 1778 aa14.24□□□□□ -0.13
KDM1A-205ENST00000494920 ARFGEF2Q9Y6D5 1785 aa14.24□□□□□ -0.13
KDM1A-205ENST00000494920 LRP5O75197 1615 aa14.23□□□□□ -0.13
KDM1A-205ENST00000494920 RGL2O15211 777 aa14.23□□□□□ -0.13
KDM1A-205ENST00000494920 CAMTA2O94983 1202 aa14.23□□□□□ -0.13
KDM1A-205ENST00000494920 CT47B1P0C2W7 299 aaPredicted RBP14.23□□□□□ -0.13
KDM1A-205ENST00000494920 TTLL7Q6ZT98 887 aa14.23□□□□□ -0.13
KDM1A-205ENST00000494920 SLC16A10Q8TF71 515 aa14.23□□□□□ -0.13
KDM1A-205ENST00000494920 DBF4Q9UBU7 674 aaPredicted RBP14.23□□□□□ -0.13
KDM1A-205ENST00000494920 GOLGB1Q14789 3259 aaKnown RBP14.22□□□□□ -0.13
KDM1A-205ENST00000494920 NRXN2Q9P2S2 1712 aa14.22□□□□□ -0.13
KDM1A-205ENST00000494920 GYS1P13807 737 aa14.22□□□□□ -0.13
KDM1A-205ENST00000494920 CCDC30Q5VVM6 783 aa14.22□□□□□ -0.13
KDM1A-205ENST00000494920 SGIP1Q9BQI5 828 aa14.22□□□□□ -0.13
KDM1A-205ENST00000494920 SRP68Q9UHB9 627 aaKnown RBP14.22□□□□□ -0.13
KDM1A-205ENST00000494920 A0A087WZG4 1122 aa14.21□□□□□ -0.13
KDM1A-205ENST00000494920 MYL6BP14649 208 aa14.21□□□□□ -0.13
KDM1A-205ENST00000494920 ZNF428Q96B54 188 aa14.21□□□□□ -0.13
KDM1A-205ENST00000494920 CHMP4AQ9BY43 222 aa14.21□□□□□ -0.13
KDM1A-205ENST00000494920 AFDNP55196 1824 aaKnown RBP14.2□□□□□ -0.14
KDM1A-205ENST00000494920 G2E3Q7L622 706 aa14.2□□□□□ -0.14
KDM1A-205ENST00000494920 DZIP3Q86Y13 1208 aaKnown RBP14.2□□□□□ -0.14
KDM1A-205ENST00000494920 XAGE3Q8WTP9 111 aa14.2□□□□□ -0.14
KDM1A-205ENST00000494920 MTFR1LQ9H019 292 aa14.2□□□□□ -0.14
KDM1A-205ENST00000494920 HYPKQ9NX55 129 aa14.2□□□□□ -0.14
KDM1A-205ENST00000494920 TBC1D2BQ9UPU7 963 aa14.2□□□□□ -0.14
KDM1A-205ENST00000494920 ATP10DQ9P241 1426 aa14.2□□□□□ -0.14
KDM1A-205ENST00000494920 MAP3K15Q6ZN16 1313 aa14.19□□□□□ -0.14
KDM1A-205ENST00000494920 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
KDM1A-205ENST00000494920 RFC4P35249 363 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms