RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 RAI14Q9P0K7 980 aa5.71□□□□□ -1.5
PRKD3-210ENST00000494667 TSPY4P0CV99 314 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 TSPY10P0CW01 314 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 GPS2Q13227 327 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 SRRTQ9BXP5 876 aaKnown RBP5.7□□□□□ -1.5
PRKD3-210ENST00000494667 ZNF215Q9UL58 517 aaPredicted RBP5.7□□□□□ -1.5
PRKD3-210ENST00000494667 ATP6V1DQ9Y5K8 247 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 SALL3Q9BXA9 1300 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 NOM1Q5C9Z4 860 aaKnown RBP5.7□□□□□ -1.5
PRKD3-210ENST00000494667 SYT10Q6XYQ8 523 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 ZFYVE9O95405 1425 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 SGSM2O43147 1006 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 PTGS1P23219 599 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 EXOSC9Q06265 439 aaKnown RBP5.7□□□□□ -1.5
PRKD3-210ENST00000494667 LMOD3Q0VAK6 560 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 CFAP53Q96M91 514 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 AOX1Q06278 1338 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 PSDA5PKW4 1024 aaPredicted RBP5.7□□□□□ -1.5
PRKD3-210ENST00000494667 ANKRD45Q5TZF3 282 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 CCDC91Q7Z6B0 441 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 FILIP1Q7Z7B0 1213 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 MRPL50Q8N5N7 158 aaKnown RBP5.7□□□□□ -1.5
PRKD3-210ENST00000494667 JRKLQ9Y4A0 524 aa5.7□□□□□ -1.5
PRKD3-210ENST00000494667 PHLPP2Q6ZVD8 1323 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
PRKD3-210ENST00000494667 HSP90B1P14625 803 aaKnown RBP5.69□□□□□ -1.5
PRKD3-210ENST00000494667 REXO1L1PQ8IX06 675 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 CNKSR2Q8WXI2 1034 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 MROH1Q8NDA8 1641 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 SPAG9O60271 1321 aaKnown RBP5.69□□□□□ -1.5
PRKD3-210ENST00000494667 CCDC196A0A1B0GTZ2 297 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 C21orf2O43822 256 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 CLCN6P51797 869 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 ZSCAN26Q16670 478 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 SRCIN1Q9C0H9 1055 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 MRVI1Q9Y6F6 885 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 ABCC1P33527 1531 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 NEXMIFQ5QGS0 1516 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 C11orf91Q3C1V1 193 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 CCDC158Q5M9N0 1113 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 LRRC8AQ8IWT6 810 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 STAG1Q8WVM7 1258 aa5.69□□□□□ -1.5
PRKD3-210ENST00000494667 RRP15Q9Y3B9 282 aaKnown RBP5.69□□□□□ -1.5
PRKD3-210ENST00000494667 TTC21AQ8NDW8 1320 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 LOC102724159A0A0B4J2E5 919 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 KIF3CO14782 793 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 TMPOP42166 694 aaKnown RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 CORO7P57737 925 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 PWP2Q15269 919 aaKnown RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 CT47A1Q5JQC4 288 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ANKRD44Q8N8A2 993 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 BCL2L13Q9BXK5 485 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 OSBPL5Q9H0X9 879 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ZSCAN16Q9H4T2 348 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 MKRN1Q9UHC7 482 aaKnown RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 TULP4Q9NRJ4 1543 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 PIK3C2BO00750 1634 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ATXN2Q99700 1313 aaKnown RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 SDSP20132 328 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ACTN2P35609 894 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 CCZ1BP86790 482 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 CCZ1P86791 482 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ELF2Q15723 593 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 RPAP2Q8IXW5 612 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 CCAR2Q8N163 923 aaKnown RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 PPM1EQ8WY54 764 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 CHMP4AQ9BY43 222 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 BSDC1Q9NW68 430 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ARGLU1Q9NWB6 273 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 IMPACTQ9P2X3 320 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 MCTP2Q6DN12 878 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 AK7Q96M32 723 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ORC3Q9UBD5 711 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ZNF777Q9ULD5 760 aaPredicted RBP5.68□□□□□ -1.5
PRKD3-210ENST00000494667 TTC41PQ6P2S7 1318 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 DLG5Q8TDM6 1919 aa5.68□□□□□ -1.5
PRKD3-210ENST00000494667 ERICH4A6NGS2 130 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 SMARCA5O60264 1052 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 GIGYF1O75420 1035 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 TNNT3P45378 269 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 NAA30Q147X3 362 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 PTPN14Q15678 1187 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 TTC31Q49AM3 519 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 KRBA2Q6ZNG9 492 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 CCDC186Q7Z3E2 898 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 EGFL6Q8IUX8 553 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 CACTINQ8WUQ7 758 aaKnown RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 C16orf45Q96MC5 204 aaPredicted RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 MAP2K7O14733 419 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 F13A1P00488 732 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 ZNF853P0CG23 659 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 MCCP23508 829 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 TTC14Q96N46 770 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 RBM28Q9NW13 759 aaKnown RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 KCNG1Q9UIX4 513 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 LRRFIP2Q9Y608 721 aaKnown RBP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 ZFYVE16Q7Z3T8 1539 aa5.67□□□□□ -1.5
PRKD3-210ENST00000494667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.67□□□□□ -1.5
PRKD3-210ENST00000494667 CCDC189A1A4V9 331 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms