RNA–Protein interactions for RNA: ENST00000494580.1

CTNNA3-204, Transcript of catenin alpha 3, humanhuman

TSL 3

Gene CTNNA3, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3-204ENST00000494580 SRCAPQ6ZRS2 3230 aa6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 BHMG1C9JSJ3 638 aaPredicted RBP6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 HRO43593 1189 aa6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 UNC5CLQ8IV45 518 aa6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 KRI1Q8N9T8 703 aaKnown RBP6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 TTC13Q8NBP0 860 aa6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 PNMA3Q9UL41 463 aa6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 EMILIN1Q9Y6C2 1016 aa6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 PARP4Q9UKK3 1724 aaKnown RBP6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 COL3A1P02461 1466 aaPredicted RBP6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 CDK12Q9NYV4 1490 aaPredicted RBP6.98□□□□□ -1.29
CTNNA3-204ENST00000494580 MEGF6O75095 1541 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 MAP2P11137 1827 aaKnown RBP6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 PER1O15534 1290 aaPredicted RBP6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 RGPD1P0DJD0 1748 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 CNGB1Q14028 1251 aaPredicted RBP6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 FAM161AQ3B820 660 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 NUDT18Q6ZVK8 323 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 NLRP13Q86W25 1043 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 MRPL50Q8N5N7 158 aaKnown RBP6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 TATDN2Q93075 761 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 STRN4Q9NRL3 753 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 SPATA31A5Q5VU36 1347 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 SPATA31A7Q8IWB4 1347 aa6.97□□□□□ -1.29
CTNNA3-204ENST00000494580 TNS1Q9HBL0 1735 aaKnown RBP6.96□□□□□ -1.29
CTNNA3-204ENST00000494580 GOLGA8CPA6NN73 597 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 NBPF26B4DH59 902 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 C3orf80F5H4A9 247 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 SMAPO00193 183 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 ZMYND10O75800 440 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 TNNT2P45379 298 aaPredicted RBP6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 VPS72Q15906 364 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 CDCA8Q53HL2 280 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 ZNF772Q68DY9 489 aaPredicted RBP6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 NBPF3Q9H094 633 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 QTRT2Q9H974 415 aaKnown RBP6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 SEPT9Q9UHD8 586 aaPredicted RBP6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 SPATA31A1Q5TZJ5 1347 aa6.96□□□□□ -1.3
CTNNA3-204ENST00000494580 CRB1P82279 1406 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 NCAPD2Q15021 1401 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 HOXC9P31274 260 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 FAM98CQ17RN3 349 aaKnown RBP6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 BARGINQ6ZT62 677 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 USHBP1Q8N6Y0 703 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 COG3Q96JB2 828 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 GJD4Q96KN9 370 aaPredicted RBP6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 TRPC5Q9UL62 973 aaPredicted RBP6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 TOGARAM1Q9Y4F4 1720 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 RTL1A6NKG5 1358 aa6.95□□□□□ -1.3
CTNNA3-204ENST00000494580 BLMP54132 1417 aaPredicted RBP6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 OATP04181 439 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 RBM6P78332 1123 aaKnown RBP6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 HSP90AB2PQ58FF8 381 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 CC2D1BQ5T0F9 858 aaKnown RBP6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 FAM182BQ5T319 152 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 LAPTM4BQ86VI4 370 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 RBM46Q8TBY0 533 aaKnown RBP6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 LTV1Q96GA3 475 aaPredicted RBP6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 USP35Q9P2H5 1018 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 ADGRG1Q9Y653 693 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 CGNL1Q0VF96 1302 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 WDR17Q8IZU2 1322 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 NSD2O96028 1365 aa6.94□□□□□ -1.3
CTNNA3-204ENST00000494580 TNS2Q63HR2 1409 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 PKD1L3Q7Z443 1732 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 IRF6O14896 467 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 RXRBP28702 533 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 MAP2K5Q13163 448 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 ANKRD24Q8TF21 1146 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 EYA1Q99502 592 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 POLKQ9UBT6 870 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 FLT4P35916 1363 aa6.93□□□□□ -1.3
CTNNA3-204ENST00000494580 TPRNQ4KMQ1 711 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 SEPT12Q8IYM1 358 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 KCNH5Q8NCM2 988 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 IP6K1Q92551 441 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 CCDC9Q9Y3X0 531 aaKnown RBP6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 DOT1LQ8TEK3 1739 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 INSRP06213 1382 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 PARD3Q8TEW0 1356 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 SBF2Q86WG5 1849 aa6.92□□□□□ -1.3
CTNNA3-204ENST00000494580 PTF1AQ7RTS3 328 aa6.91□□□□□ -1.3
CTNNA3-204ENST00000494580 AEBP1Q8IUX7 1158 aa6.91□□□□□ -1.3
CTNNA3-204ENST00000494580 NPC1L1Q9UHC9 1359 aa6.91□□□□□ -1.3
CTNNA3-204ENST00000494580 DDX10Q13206 875 aaKnown RBP6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 EIF4A2Q14240 407 aaKnown RBP6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 NBPF6Q5VWK0 638 aa6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 TOM1L2Q6ZVM7 507 aa6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 METTL3Q86U44 580 aaKnown RBP6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 PXYLP1Q8TE99 480 aa6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 WNT2BQ93097 391 aa6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 KCTD12Q96CX2 325 aaKnown RBP6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 ZFRQ96KR1 1074 aaKnown RBP6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 NBPF4Q96M43 638 aa6.9□□□□□ -1.3
CTNNA3-204ENST00000494580 OVOS2A0A0G2JMS6 1433 aa6.9□□□□□ -1.31
CTNNA3-204ENST00000494580 NHSQ6T4R5 1651 aa6.9□□□□□ -1.31
CTNNA3-204ENST00000494580 RCCD1A6NED2 376 aa6.89□□□□□ -1.31
CTNNA3-204ENST00000494580 PPM1GO15355 546 aaPredicted RBP6.89□□□□□ -1.31
CTNNA3-204ENST00000494580 CSB-PGBD3P0DP91 1061 aa6.89□□□□□ -1.31
CTNNA3-204ENST00000494580 AMPHP49418 695 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms