RNA–Protein interactions for RNA: ENST00000494411.5

PCMT1-209, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase, humanhuman

TSL 4

Gene PCMT1, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMT1-209ENST00000494411 RUNDC1Q96C34 613 aa25.18■■□□□ 1.62
PCMT1-209ENST00000494411 MIS18AQ9NYP9 233 aa25.18■■□□□ 1.62
PCMT1-209ENST00000494411 RRP7AQ9Y3A4 280 aaKnown RBP25.18■■□□□ 1.62
PCMT1-209ENST00000494411 ANP32CO43423 234 aa25.16■■□□□ 1.62
PCMT1-209ENST00000494411 GYS1P13807 737 aa25.16■■□□□ 1.62
PCMT1-209ENST00000494411 CCDC184Q52MB2 194 aa25.16■■□□□ 1.62
PCMT1-209ENST00000494411 TEX13AQ9BXU3 409 aaPredicted RBP25.16■■□□□ 1.62
PCMT1-209ENST00000494411 SRP68Q9UHB9 627 aaKnown RBP25.16■■□□□ 1.62
PCMT1-209ENST00000494411 USP42Q9H9J4 1324 aaKnown RBP25.15■■□□□ 1.62
PCMT1-209ENST00000494411 COL15A1P39059 1388 aa25.15■■□□□ 1.62
PCMT1-209ENST00000494411 GOLGB1Q14789 3259 aaKnown RBP25.14■■□□□ 1.62
PCMT1-209ENST00000494411 MMP10P09238 476 aa25.14■■□□□ 1.62
PCMT1-209ENST00000494411 CANXP27824 592 aaKnown RBP25.14■■□□□ 1.62
PCMT1-209ENST00000494411 NLGN1Q8N2Q7 840 aa25.14■■□□□ 1.62
PCMT1-209ENST00000494411 LMOD3Q0VAK6 560 aa25.13■■□□□ 1.61
PCMT1-209ENST00000494411 NEUROD2Q15784 382 aa25.13■■□□□ 1.61
PCMT1-209ENST00000494411 PNISRQ8TF01 805 aaKnown RBP25.13■■□□□ 1.61
PCMT1-209ENST00000494411 LAMB4A4D0S4 1761 aa25.13■■□□□ 1.61
PCMT1-209ENST00000494411 PRAMEF22A3QJZ6 481 aa25.12■■□□□ 1.61
PCMT1-209ENST00000494411 NLGN2Q8NFZ4 835 aa25.12■■□□□ 1.61
PCMT1-209ENST00000494411 UTRNP46939 3433 aa25.12■■□□□ 1.61
PCMT1-209ENST00000494411 SNRPA1P09661 255 aaKnown RBP25.11■■□□□ 1.61
PCMT1-209ENST00000494411 USP16Q9Y5T5 823 aa25.1■■□□□ 1.61
PCMT1-209ENST00000494411 DCAF8L1A6NGE4 600 aa25.09■■□□□ 1.61
PCMT1-209ENST00000494411 ZPR1O75312 459 aa25.09■■□□□ 1.61
PCMT1-209ENST00000494411 A1BGP04217 495 aa25.09■■□□□ 1.61
PCMT1-209ENST00000494411 EIF5P55010 431 aaKnown RBP25.09■■□□□ 1.61
PCMT1-209ENST00000494411 FKBP8Q14318 412 aa25.09■■□□□ 1.61
PCMT1-209ENST00000494411 USPL1Q5W0Q7 1092 aa25.09■■□□□ 1.61
PCMT1-209ENST00000494411 NARFQ9UHQ1 456 aa25.08■■□□□ 1.61
PCMT1-209ENST00000494411 TRIM35Q9UPQ4 493 aa25.08■■□□□ 1.61
PCMT1-209ENST00000494411 CD2APQ9Y5K6 639 aa25.08■■□□□ 1.61
PCMT1-209ENST00000494411 SCN7AQ01118 1682 aa25.07■■□□□ 1.6
PCMT1-209ENST00000494411 MRS2Q9HD23 443 aa25.07■■□□□ 1.6
PCMT1-209ENST00000494411 ZNF330Q9Y3S2 320 aaPredicted RBP25.07■■□□□ 1.6
PCMT1-209ENST00000494411 KIF13BQ9NQT8 1826 aa25.07■■□□□ 1.6
PCMT1-209ENST00000494411 IL6STP40189 918 aaPredicted RBP25.06■■□□□ 1.6
PCMT1-209ENST00000494411 EIF4A1P60842 406 aaKnown RBP25.06■■□□□ 1.6
PCMT1-209ENST00000494411 TSPYL4Q9UJ04 414 aa25.06■■□□□ 1.6
PCMT1-209ENST00000494411 A0A087WZG4 1122 aa25.05■■□□□ 1.6
PCMT1-209ENST00000494411 PIP4K2AP48426 406 aaPredicted RBP25.05■■□□□ 1.6
PCMT1-209ENST00000494411 APAF1O14727 1248 aa25.04■■□□□ 1.6
PCMT1-209ENST00000494411 PARP3Q9Y6F1 533 aa25.04■■□□□ 1.6
PCMT1-209ENST00000494411 DDR1Q08345 913 aa25.03■■□□□ 1.6
PCMT1-209ENST00000494411 BCL2L12Q9HB09 334 aa25.03■■□□□ 1.6
PCMT1-209ENST00000494411 BCORQ6W2J9 1755 aa25.03■■□□□ 1.6
PCMT1-209ENST00000494411 C10orf71Q711Q0 1435 aa25.03■■□□□ 1.6
PCMT1-209ENST00000494411 GIGYF1O75420 1035 aaPredicted RBP25.02■■□□□ 1.6
PCMT1-209ENST00000494411 KIAA1551Q9HCM1 1747 aa25.01■■□□□ 1.59
PCMT1-209ENST00000494411 YY1P25490 414 aa25.01■■□□□ 1.59
PCMT1-209ENST00000494411 PELP1Q8IZL8 1130 aaKnown RBP25.01■■□□□ 1.59
PCMT1-209ENST00000494411 BABAM1Q9NWV8 329 aa25.01■■□□□ 1.59
PCMT1-209ENST00000494411 TBC1D2BQ9UPU7 963 aa25.01■■□□□ 1.59
PCMT1-209ENST00000494411 AFDNP55196 1824 aaKnown RBP25■■□□□ 1.59
PCMT1-209ENST00000494411 NBPF26B4DH59 902 aa25■■□□□ 1.59
PCMT1-209ENST00000494411 TM4SF1P30408 202 aa25■■□□□ 1.59
PCMT1-209ENST00000494411 NBPF10Q6P3W6 841 aaKnown RBP25■■□□□ 1.59
PCMT1-209ENST00000494411 NPM2Q86SE8 214 aaKnown RBP25■■□□□ 1.59
PCMT1-209ENST00000494411 NBPF15Q8N660 670 aa25■■□□□ 1.59
PCMT1-209ENST00000494411 GPR162Q16538 588 aa24.99■■□□□ 1.59
PCMT1-209ENST00000494411 N4BP2Q86UW6 1770 aaPredicted RBP24.99■■□□□ 1.59
PCMT1-209ENST00000494411 POLRMTO00411 1230 aaKnown RBP24.98■■□□□ 1.59
PCMT1-209ENST00000494411 NFIXQ14938 502 aa24.98■■□□□ 1.59
PCMT1-209ENST00000494411 LAS1LQ9Y4W2 734 aaKnown RBP24.98■■□□□ 1.59
PCMT1-209ENST00000494411 CHL1O00533 1208 aa24.97■■□□□ 1.59
PCMT1-209ENST00000494411 DZIP3Q86Y13 1208 aaKnown RBP24.97■■□□□ 1.59
PCMT1-209ENST00000494411 NRXN2Q9P2S2 1712 aa24.97■■□□□ 1.59
PCMT1-209ENST00000494411 PXDNLA1KZ92 1463 aa24.96■■□□□ 1.59
PCMT1-209ENST00000494411 CAMTA2O94983 1202 aa24.96■■□□□ 1.59
PCMT1-209ENST00000494411 YBX3P16989 372 aaKnown RBP eCLIP24.94■■□□□ 1.58
PCMT1-209ENST00000494411 BICDL1Q6ZP65 573 aa24.94■■□□□ 1.58
PCMT1-209ENST00000494411 CHD4Q14839 1912 aa24.94■■□□□ 1.58
PCMT1-209ENST00000494411 SENP3-EIF4A1A0A087X0R7 540 aa24.93■■□□□ 1.58
PCMT1-209ENST00000494411 TBC1D9BQ66K14 1250 aa24.93■■□□□ 1.58
PCMT1-209ENST00000494411 WWC3Q9ULE0 1092 aa24.93■■□□□ 1.58
PCMT1-209ENST00000494411 CFAP44Q96MT7 982 aa24.92■■□□□ 1.58
PCMT1-209ENST00000494411 BRCA1P38398 1863 aaKnown RBP24.92■■□□□ 1.58
PCMT1-209ENST00000494411 SERPINB2P05120 415 aa24.91■■□□□ 1.58
PCMT1-209ENST00000494411 TGFB2P61812 414 aa24.91■■□□□ 1.58
PCMT1-209ENST00000494411 KRT24Q2M2I5 525 aa24.91■■□□□ 1.58
PCMT1-209ENST00000494411 MYL6BP14649 208 aa24.9■■□□□ 1.58
PCMT1-209ENST00000494411 A0A0G2JLW4 131 aa24.89■■□□□ 1.58
PCMT1-209ENST00000494411 EIF2S2P20042 333 aaKnown RBP24.89■■□□□ 1.58
PCMT1-209ENST00000494411 CALD1Q05682 793 aaKnown RBP24.89■■□□□ 1.58
PCMT1-209ENST00000494411 NGEFQ8N5V2 710 aa24.89■■□□□ 1.58
PCMT1-209ENST00000494411 ERBB4Q15303 1308 aa24.88■■□□□ 1.57
PCMT1-209ENST00000494411 ZNF853P0CG23 659 aa24.88■■□□□ 1.57
PCMT1-209ENST00000494411 DPEP1P16444 411 aa24.88■■□□□ 1.57
PCMT1-209ENST00000494411 MBIPQ9NS73 344 aa24.88■■□□□ 1.57
PCMT1-209ENST00000494411 IFT57Q9NWB7 429 aa24.88■■□□□ 1.57
PCMT1-209ENST00000494411 CARMIL3Q8ND23 1372 aa24.88■■□□□ 1.57
PCMT1-209ENST00000494411 ZNF652Q9Y2D9 606 aa24.87■■□□□ 1.57
PCMT1-209ENST00000494411 NUP98P52948 1817 aa24.86■■□□□ 1.57
PCMT1-209ENST00000494411 GRIN3BO60391 1043 aa24.86■■□□□ 1.57
PCMT1-209ENST00000494411 GNAI1P63096 354 aa24.86■■□□□ 1.57
PCMT1-209ENST00000494411 CLEC4GQ6UXB4 293 aa24.86■■□□□ 1.57
PCMT1-209ENST00000494411 FAM9BQ8IZU0 186 aa24.86■■□□□ 1.57
PCMT1-209ENST00000494411 NECTIN2Q92692 538 aa24.86■■□□□ 1.57
PCMT1-209ENST00000494411 SETDB2Q96T68 719 aa24.86■■□□□ 1.57
PCMT1-209ENST00000494411 ANKRD31Q8N7Z5 1873 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms