RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 NPAS3Q8IXF0 933 aa13.79□□□□□ -0.2
HMGB3P14-201ENST00000494195 ZDHHC1Q8WTX9 485 aa13.79□□□□□ -0.2
HMGB3P14-201ENST00000494195 CHMP3Q9Y3E7 222 aa13.79□□□□□ -0.2
HMGB3P14-201ENST00000494195 WEE1P30291 646 aa13.78□□□□□ -0.2
HMGB3P14-201ENST00000494195 NOS2P35228 1153 aa13.78□□□□□ -0.2
HMGB3P14-201ENST00000494195 SERTM1A2A2V5 107 aa13.77□□□□□ -0.21
HMGB3P14-201ENST00000494195 NBPF1Q3BBV0 1214 aa13.77□□□□□ -0.21
HMGB3P14-201ENST00000494195 STAG2Q8N3U4 1231 aa13.77□□□□□ -0.21
HMGB3P14-201ENST00000494195 CLP1Q92989 425 aaKnown RBP13.77□□□□□ -0.21
HMGB3P14-201ENST00000494195 L3MBTL2Q969R5 705 aa13.77□□□□□ -0.21
HMGB3P14-201ENST00000494195 PARP3Q9Y6F1 533 aa13.77□□□□□ -0.21
HMGB3P14-201ENST00000494195 EML1O00423 815 aa13.76□□□□□ -0.21
HMGB3P14-201ENST00000494195 TERTO14746 1132 aaKnown RBP13.76□□□□□ -0.21
HMGB3P14-201ENST00000494195 F11P03951 625 aa13.76□□□□□ -0.21
HMGB3P14-201ENST00000494195 POTEAQ6S8J7 498 aa13.76□□□□□ -0.21
HMGB3P14-201ENST00000494195 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
HMGB3P14-201ENST00000494195 ZNF232Q9UNY5 417 aa13.76□□□□□ -0.21
HMGB3P14-201ENST00000494195 TMEM88BA6NKF7 163 aa13.75□□□□□ -0.21
HMGB3P14-201ENST00000494195 ITGA6P23229 1130 aa13.75□□□□□ -0.21
HMGB3P14-201ENST00000494195 C1orf216Q8TAB5 229 aa13.75□□□□□ -0.21
HMGB3P14-201ENST00000494195 AIDAQ96BJ3 306 aa13.75□□□□□ -0.21
HMGB3P14-201ENST00000494195 ZDHHC3Q9NYG2 299 aa13.75□□□□□ -0.21
HMGB3P14-201ENST00000494195 MSX1P28360 303 aa13.74□□□□□ -0.21
HMGB3P14-201ENST00000494195 VEGFBP49765 207 aa13.74□□□□□ -0.21
HMGB3P14-201ENST00000494195 HIRAP54198 1017 aaPredicted RBP13.74□□□□□ -0.21
HMGB3P14-201ENST00000494195 CHMP7Q8WUX9 453 aaPredicted RBP13.74□□□□□ -0.21
HMGB3P14-201ENST00000494195 USTQ9Y2C2 406 aa13.74□□□□□ -0.21
HMGB3P14-201ENST00000494195 H3BM21 787 aa13.73□□□□□ -0.21
HMGB3P14-201ENST00000494195 PRMT3O60678 531 aa13.73□□□□□ -0.21
HMGB3P14-201ENST00000494195 OCLNQ16625 522 aa13.73□□□□□ -0.21
HMGB3P14-201ENST00000494195 ZNF775Q96BV0 537 aaPredicted RBP13.73□□□□□ -0.21
HMGB3P14-201ENST00000494195 PRIMPOLQ96LW4 560 aa13.73□□□□□ -0.21
HMGB3P14-201ENST00000494195 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
HMGB3P14-201ENST00000494195 GPAMQ9HCL2 828 aa13.73□□□□□ -0.21
HMGB3P14-201ENST00000494195 FOXO3O43524 673 aa13.72□□□□□ -0.21
HMGB3P14-201ENST00000494195 SH3PXD2AQ5TCZ1 1133 aa13.72□□□□□ -0.21
HMGB3P14-201ENST00000494195 RIPOR1Q6ZS17 1223 aa13.72□□□□□ -0.21
HMGB3P14-201ENST00000494195 TATP17735 454 aaPredicted RBP13.71□□□□□ -0.21
HMGB3P14-201ENST00000494195 ATP4AP20648 1035 aa13.71□□□□□ -0.21
HMGB3P14-201ENST00000494195 TXLNAP40222 546 aa13.71□□□□□ -0.21
HMGB3P14-201ENST00000494195 RETREG2Q8NC44 543 aa13.71□□□□□ -0.21
HMGB3P14-201ENST00000494195 SLC16A10Q8TF71 515 aa13.71□□□□□ -0.21
HMGB3P14-201ENST00000494195 GMCL1Q96IK5 515 aa13.7□□□□□ -0.22
HMGB3P14-201ENST00000494195 CUEDC1Q9NWM3 386 aaPredicted RBP13.7□□□□□ -0.22
HMGB3P14-201ENST00000494195 SLAIN2Q9P270 581 aa13.7□□□□□ -0.22
HMGB3P14-201ENST00000494195 H7C1W4 665 aa13.69□□□□□ -0.22
HMGB3P14-201ENST00000494195 TRIM22Q8IYM9 498 aa13.69□□□□□ -0.22
HMGB3P14-201ENST00000494195 PGBD3Q8N328 593 aa13.69□□□□□ -0.22
HMGB3P14-201ENST00000494195 CXXC1Q9P0U4 656 aaPredicted RBP13.69□□□□□ -0.22
HMGB3P14-201ENST00000494195 NFX1Q12986 1120 aaKnown RBP13.68□□□□□ -0.22
HMGB3P14-201ENST00000494195 NANOS1Q8WY41 292 aaKnown RBP13.68□□□□□ -0.22
HMGB3P14-201ENST00000494195 CRISPLD1Q9H336 500 aa13.68□□□□□ -0.22
HMGB3P14-201ENST00000494195 RUBCNLQ9H714 662 aa13.68□□□□□ -0.22
HMGB3P14-201ENST00000494195 HCN4Q9Y3Q4 1203 aa13.68□□□□□ -0.22
HMGB3P14-201ENST00000494195 ATP2B4P23634 1241 aa13.67□□□□□ -0.22
HMGB3P14-201ENST00000494195 FKBP5Q13451 457 aaPredicted RBP13.67□□□□□ -0.22
HMGB3P14-201ENST00000494195 C1orf53Q5VUE5 145 aa13.67□□□□□ -0.22
HMGB3P14-201ENST00000494195 CARNS1A5YM72 827 aa13.66□□□□□ -0.22
HMGB3P14-201ENST00000494195 PDE4CQ08493 712 aa13.66□□□□□ -0.22
HMGB3P14-201ENST00000494195 LBRQ14739 615 aaKnown RBP13.66□□□□□ -0.22
HMGB3P14-201ENST00000494195 DBN1Q16643 649 aa13.66□□□□□ -0.22
HMGB3P14-201ENST00000494195 VTI1AQ96AJ9 217 aa13.66□□□□□ -0.22
HMGB3P14-201ENST00000494195 ZNF837Q96EG3 531 aaPredicted RBP13.66□□□□□ -0.22
HMGB3P14-201ENST00000494195 PHACTR1Q9C0D0 580 aa13.66□□□□□ -0.22
HMGB3P14-201ENST00000494195 CDC14CA4D256 554 aa13.65□□□□□ -0.22
HMGB3P14-201ENST00000494195 VSIG8P0DPA2 414 aa13.65□□□□□ -0.22
HMGB3P14-201ENST00000494195 ARSJQ5FYB0 599 aaPredicted RBP13.65□□□□□ -0.22
HMGB3P14-201ENST00000494195 VWA5B2Q8N398 1253 aa13.65□□□□□ -0.22
HMGB3P14-201ENST00000494195 NUCKS1Q9H1E3 243 aaKnown RBP13.65□□□□□ -0.22
HMGB3P14-201ENST00000494195 GPC6Q9Y625 555 aaPredicted RBP13.65□□□□□ -0.22
HMGB3P14-201ENST00000494195 EFHC2Q5JST6 749 aa13.64□□□□□ -0.23
HMGB3P14-201ENST00000494195 BICDL1Q6ZP65 573 aa13.64□□□□□ -0.23
HMGB3P14-201ENST00000494195 SV2AQ7L0J3 742 aa13.64□□□□□ -0.23
HMGB3P14-201ENST00000494195 ALDH16A1Q8IZ83 802 aa13.64□□□□□ -0.23
HMGB3P14-201ENST00000494195 IRF7Q92985 503 aa13.64□□□□□ -0.23
HMGB3P14-201ENST00000494195 ZIC5Q96T25 663 aa13.64□□□□□ -0.23
HMGB3P14-201ENST00000494195 WFS1O76024 890 aa13.63□□□□□ -0.23
HMGB3P14-201ENST00000494195 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
HMGB3P14-201ENST00000494195 A0A1W2PNR3 127 aa13.62□□□□□ -0.23
HMGB3P14-201ENST00000494195 C7orf43Q8WVR3 580 aa13.62□□□□□ -0.23
HMGB3P14-201ENST00000494195 NGLY1Q96IV0 654 aa13.62□□□□□ -0.23
HMGB3P14-201ENST00000494195 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.62□□□□□ -0.23
HMGB3P14-201ENST00000494195 THBS1P07996 1170 aa13.61□□□□□ -0.23
HMGB3P14-201ENST00000494195 TREML4Q6UXN2 200 aa13.61□□□□□ -0.23
HMGB3P14-201ENST00000494195 NLRP8Q86W28 1048 aa13.61□□□□□ -0.23
HMGB3P14-201ENST00000494195 COL26A1Q96A83 441 aa13.61□□□□□ -0.23
HMGB3P14-201ENST00000494195 ERBB4Q15303 1308 aa13.61□□□□□ -0.23
HMGB3P14-201ENST00000494195 SSFA2P28290 1259 aa13.6□□□□□ -0.23
HMGB3P14-201ENST00000494195 RTN1Q16799 776 aa13.6□□□□□ -0.23
HMGB3P14-201ENST00000494195 FOXR1Q6PIV2 292 aa13.59□□□□□ -0.23
HMGB3P14-201ENST00000494195 GTPBP3Q969Y2 492 aaKnown RBP13.59□□□□□ -0.23
HMGB3P14-201ENST00000494195 PTCD1O75127 700 aaKnown RBP13.58□□□□□ -0.24
HMGB3P14-201ENST00000494195 B4GALNT3Q6L9W6 998 aa13.58□□□□□ -0.24
HMGB3P14-201ENST00000494195 MKNK1Q9BUB5 465 aa13.58□□□□□ -0.24
HMGB3P14-201ENST00000494195 QTRT2Q9H974 415 aaKnown RBP13.58□□□□□ -0.24
HMGB3P14-201ENST00000494195 GJA3Q9Y6H8 435 aa13.58□□□□□ -0.24
HMGB3P14-201ENST00000494195 UBAP2LQ14157 1087 aaKnown RBP13.57□□□□□ -0.24
HMGB3P14-201ENST00000494195 FIGNL1Q6PIW4 674 aa13.57□□□□□ -0.24
HMGB3P14-201ENST00000494195 HIF1AQ16665 826 aa13.56□□□□□ -0.24
HMGB3P14-201ENST00000494195 LCE2CQ5TA81 110 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms