RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SLCO4C1Q6ZQN7 724 aa9.93□□□□□ -0.82
SMC4-223ENST00000493695 C1orf216Q8TAB5 229 aa9.93□□□□□ -0.82
SMC4-223ENST00000493695 CHIC2Q9UKJ5 165 aa9.93□□□□□ -0.82
SMC4-223ENST00000493695 CD33P20138 364 aa9.92□□□□□ -0.82
SMC4-223ENST00000493695 ATP4AP20648 1035 aa9.92□□□□□ -0.82
SMC4-223ENST00000493695 EML3Q32P44 896 aa9.92□□□□□ -0.82
SMC4-223ENST00000493695 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
SMC4-223ENST00000493695 PARP3Q9Y6F1 533 aa9.92□□□□□ -0.82
SMC4-223ENST00000493695 A6NJY4 79 aa9.91□□□□□ -0.82
SMC4-223ENST00000493695 PIK3CDO00329 1044 aa9.91□□□□□ -0.82
SMC4-223ENST00000493695 PIK3R2O00459 728 aa9.91□□□□□ -0.82
SMC4-223ENST00000493695 NLRP8Q86W28 1048 aa9.91□□□□□ -0.82
SMC4-223ENST00000493695 NDFIP2Q9NV92 336 aa9.91□□□□□ -0.82
SMC4-223ENST00000493695 PRR12Q9ULL5 1215 aa9.91□□□□□ -0.82
SMC4-223ENST00000493695 KRBA1A5PL33 1030 aa9.9□□□□□ -0.82
SMC4-223ENST00000493695 MCM6Q14566 821 aa9.9□□□□□ -0.82
SMC4-223ENST00000493695 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
SMC4-223ENST00000493695 TMEM229AB2RXF0 380 aa9.89□□□□□ -0.83
SMC4-223ENST00000493695 PROCP04070 461 aa9.89□□□□□ -0.83
SMC4-223ENST00000493695 ITGB2P05107 769 aa9.89□□□□□ -0.83
SMC4-223ENST00000493695 ARAFP10398 606 aa9.89□□□□□ -0.83
SMC4-223ENST00000493695 MAPTP10636 758 aaKnown RBP9.89□□□□□ -0.83
SMC4-223ENST00000493695 EPXP11678 715 aa9.89□□□□□ -0.83
SMC4-223ENST00000493695 BTBD6Q96KE9 485 aa9.89□□□□□ -0.83
SMC4-223ENST00000493695 SUV39H2Q9H5I1 410 aa9.89□□□□□ -0.83
SMC4-223ENST00000493695 DNAAF2Q9NVR5 837 aaKnown RBP9.89□□□□□ -0.83
SMC4-223ENST00000493695 CDK2AP1O14519 115 aa9.88□□□□□ -0.83
SMC4-223ENST00000493695 GNB5O14775 395 aa9.88□□□□□ -0.83
SMC4-223ENST00000493695 BACH1O14867 736 aa9.88□□□□□ -0.83
SMC4-223ENST00000493695 ADAM23O75077 832 aa9.88□□□□□ -0.83
SMC4-223ENST00000493695 COL8A1P27658 744 aa9.88□□□□□ -0.83
SMC4-223ENST00000493695 NEUROD4Q9HD90 331 aa9.88□□□□□ -0.83
SMC4-223ENST00000493695 ADH6P28332 368 aa9.87□□□□□ -0.83
SMC4-223ENST00000493695 GTF2IP78347 998 aa9.87□□□□□ -0.83
SMC4-223ENST00000493695 ZNF232Q9UNY5 417 aa9.87□□□□□ -0.83
SMC4-223ENST00000493695 USP3Q9Y6I4 520 aa9.87□□□□□ -0.83
SMC4-223ENST00000493695 PCBP4P57723 403 aaKnown RBP9.86□□□□□ -0.83
SMC4-223ENST00000493695 TNP2Q05952 138 aa9.86□□□□□ -0.83
SMC4-223ENST00000493695 ALYREFQ86V81 257 aaKnown RBP9.86□□□□□ -0.83
SMC4-223ENST00000493695 DEPDC4Q8N2C3 294 aa9.86□□□□□ -0.83
SMC4-223ENST00000493695 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.86□□□□□ -0.83
SMC4-223ENST00000493695 SLC4A9Q96Q91 983 aa9.86□□□□□ -0.83
SMC4-223ENST00000493695 COG6Q9Y2V7 657 aa9.86□□□□□ -0.83
SMC4-223ENST00000493695 PCDHGA11Q9Y5H2 935 aa9.86□□□□□ -0.83
SMC4-223ENST00000493695 RAD21O60216 631 aa9.85□□□□□ -0.83
SMC4-223ENST00000493695 NCOA4Q13772 614 aa9.85□□□□□ -0.83
SMC4-223ENST00000493695 LINC00114Q6XXX2 140 aa9.85□□□□□ -0.83
SMC4-223ENST00000493695 CHSY3Q70JA7 882 aa9.85□□□□□ -0.83
SMC4-223ENST00000493695 ZIC5Q96T25 663 aa9.85□□□□□ -0.83
SMC4-223ENST00000493695 ZDHHC3Q9NYG2 299 aa9.85□□□□□ -0.83
SMC4-223ENST00000493695 K7ELQ4 463 aaPredicted RBP9.84□□□□□ -0.83
SMC4-223ENST00000493695 BAG6P46379 1132 aa9.84□□□□□ -0.83
SMC4-223ENST00000493695 TBCELQ5QJ74 424 aa9.84□□□□□ -0.83
SMC4-223ENST00000493695 NOP53Q9NZM5 478 aaKnown RBP9.84□□□□□ -0.83
SMC4-223ENST00000493695 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
SMC4-223ENST00000493695 FURINP09958 794 aa9.83□□□□□ -0.84
SMC4-223ENST00000493695 TXLNAP40222 546 aa9.83□□□□□ -0.84
SMC4-223ENST00000493695 MTFR1Q15390 333 aa9.83□□□□□ -0.84
SMC4-223ENST00000493695 ZNF358Q9NW07 568 aa9.83□□□□□ -0.84
SMC4-223ENST00000493695 MARK1Q9P0L2 795 aa9.83□□□□□ -0.84
SMC4-223ENST00000493695 LRRC69Q6ZNQ3 347 aa9.82□□□□□ -0.84
SMC4-223ENST00000493695 L3MBTL2Q969R5 705 aa9.82□□□□□ -0.84
SMC4-223ENST00000493695 DGKGP49619 791 aa9.81□□□□□ -0.84
SMC4-223ENST00000493695 TNS4Q8IZW8 715 aa9.81□□□□□ -0.84
SMC4-223ENST00000493695 SCHIP1Q9P0W5 487 aaPredicted RBP9.81□□□□□ -0.84
SMC4-223ENST00000493695 USP17L5A8MUK1 530 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 C1QTNF9BB2RNN3 333 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 LZTS3O60299 673 aaPredicted RBP9.8□□□□□ -0.84
SMC4-223ENST00000493695 FAM157BP0CG42 384 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 HOXB4P17483 251 aaPredicted RBP9.8□□□□□ -0.84
SMC4-223ENST00000493695 ALAS2P22557 587 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 FAM182BQ5T319 152 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 FCHSD1Q86WN1 690 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 POM121Q96HA1 1249 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 ALG2Q9H553 416 aa9.8□□□□□ -0.84
SMC4-223ENST00000493695 NOS2P35228 1153 aa9.79□□□□□ -0.84
SMC4-223ENST00000493695 ZNF468Q5VIY5 522 aaPredicted RBP9.79□□□□□ -0.84
SMC4-223ENST00000493695 SLC9A9Q8IVB4 645 aa9.79□□□□□ -0.84
SMC4-223ENST00000493695 STRN4Q9NRL3 753 aa9.79□□□□□ -0.84
SMC4-223ENST00000493695 KLF15Q9UIH9 416 aa9.79□□□□□ -0.84
SMC4-223ENST00000493695 CHMP3Q9Y3E7 222 aa9.79□□□□□ -0.84
SMC4-223ENST00000493695 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
SMC4-223ENST00000493695 ZNF295-AS1Q8N0V1 137 aa9.78□□□□□ -0.84
SMC4-223ENST00000493695 TPCN2Q8NHX9 752 aa9.78□□□□□ -0.84
SMC4-223ENST00000493695 AVENQ9NQS1 362 aaPredicted RBP9.78□□□□□ -0.84
SMC4-223ENST00000493695 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 UBTFP17480 764 aaKnown RBP9.77□□□□□ -0.85
SMC4-223ENST00000493695 SYT9Q86SS6 491 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 CD163Q86VB7 1156 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 TRIM50Q86XT4 487 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 NFATC2IPQ8NCF5 419 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 RHPN1Q8TCX5 695 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 ZDHHC1Q8WTX9 485 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 HCN2Q9UL51 889 aa9.77□□□□□ -0.85
SMC4-223ENST00000493695 RBM19Q9Y4C8 960 aaKnown RBP9.77□□□□□ -0.85
SMC4-223ENST00000493695 TEAD4Q15561 434 aa9.76□□□□□ -0.85
SMC4-223ENST00000493695 PLVAPQ9BX97 442 aa9.76□□□□□ -0.85
SMC4-223ENST00000493695 CHRNA4P43681 627 aa9.75□□□□□ -0.85
SMC4-223ENST00000493695 SAMD5Q5TGI4 173 aa9.75□□□□□ -0.85
SMC4-223ENST00000493695 ELOA3CA0A087WX78 387 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms