RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 HTRA3P83110 453 aa24.12■■□□□ 1.45
NUP50-218ENST00000493456 DNAJC10Q8IXB1 793 aa24.12■■□□□ 1.45
NUP50-218ENST00000493456 SMC1BQ8NDV3 1235 aa24.12■■□□□ 1.45
NUP50-218ENST00000493456 NRXN2Q9P2S2 1712 aa24.12■■□□□ 1.45
NUP50-218ENST00000493456 COL15A1P39059 1388 aa24.11■■□□□ 1.45
NUP50-218ENST00000493456 NARFQ9UHQ1 456 aa24.1■■□□□ 1.45
NUP50-218ENST00000493456 DLEC1Q9Y238 1755 aa24.09■■□□□ 1.45
NUP50-218ENST00000493456 CYP19A1P11511 503 aaPredicted RBP24.09■■□□□ 1.45
NUP50-218ENST00000493456 AFDNP55196 1824 aaKnown RBP24.09■■□□□ 1.45
NUP50-218ENST00000493456 HSPA5P11021 654 aaKnown RBP24.08■■□□□ 1.45
NUP50-218ENST00000493456 LMNB1P20700 586 aa24.08■■□□□ 1.45
NUP50-218ENST00000493456 RASSF7Q02833 373 aa24.08■■□□□ 1.45
NUP50-218ENST00000493456 NFIXQ14938 502 aa24.08■■□□□ 1.45
NUP50-218ENST00000493456 KNSTRNQ9Y448 316 aa24.07■■□□□ 1.44
NUP50-218ENST00000493456 VSIG10Q8N0Z9 540 aa24.06■■□□□ 1.44
NUP50-218ENST00000493456 LGR6Q9HBX8 967 aa24.06■■□□□ 1.44
NUP50-218ENST00000493456 ZBTB1Q9Y2K1 713 aa24.06■■□□□ 1.44
NUP50-218ENST00000493456 GLTPD2A6NH11 291 aa24.05■■□□□ 1.44
NUP50-218ENST00000493456 RNMTO43148 476 aaKnown RBP24.05■■□□□ 1.44
NUP50-218ENST00000493456 COL13A1Q5TAT6 717 aaPredicted RBP24.05■■□□□ 1.44
NUP50-218ENST00000493456 TTLL6Q8N841 843 aa24.05■■□□□ 1.44
NUP50-218ENST00000493456 SERPINB2P05120 415 aa24.04■■□□□ 1.44
NUP50-218ENST00000493456 VEGFAP15692 232 aaPredicted RBP24.04■■□□□ 1.44
NUP50-218ENST00000493456 SLC39A6Q13433 755 aa24.04■■□□□ 1.44
NUP50-218ENST00000493456 TIAM2Q8IVF5 1701 aa24.04■■□□□ 1.44
NUP50-218ENST00000493456 VIRMAQ69YN4 1812 aaKnown RBP24.03■■□□□ 1.44
NUP50-218ENST00000493456 BCL2L12Q9HB09 334 aa24.02■■□□□ 1.44
NUP50-218ENST00000493456 H0YIN7 160 aa24.01■■□□□ 1.43
NUP50-218ENST00000493456 C2CD5Q86YS7 1000 aa24.01■■□□□ 1.43
NUP50-218ENST00000493456 UBR2Q8IWV8 1755 aa24.01■■□□□ 1.43
NUP50-218ENST00000493456 PRELPP51888 382 aa24■■□□□ 1.43
NUP50-218ENST00000493456 AMER1Q5JTC6 1135 aaPredicted RBP23.99■■□□□ 1.43
NUP50-218ENST00000493456 PDZRN3Q9UPQ7 1066 aa23.99■■□□□ 1.43
NUP50-218ENST00000493456 CARMIL3Q8ND23 1372 aa23.99■■□□□ 1.43
NUP50-218ENST00000493456 A0A087WZG4 1122 aa23.98■■□□□ 1.43
NUP50-218ENST00000493456 HMOX1P09601 288 aa23.98■■□□□ 1.43
NUP50-218ENST00000493456 NFKBIEO00221 500 aa23.97■■□□□ 1.43
NUP50-218ENST00000493456 STARD3NLO95772 234 aa23.97■■□□□ 1.43
NUP50-218ENST00000493456 MTHFSDQ2M296 383 aaKnown RBP23.97■■□□□ 1.43
NUP50-218ENST00000493456 TNS4Q8IZW8 715 aa23.97■■□□□ 1.43
NUP50-218ENST00000493456 TTC5Q8N0Z6 440 aa23.97■■□□□ 1.43
NUP50-218ENST00000493456 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
NUP50-218ENST00000493456 EIF5P55010 431 aaKnown RBP23.96■■□□□ 1.43
NUP50-218ENST00000493456 SCN7AQ01118 1682 aa23.95■■□□□ 1.43
NUP50-218ENST00000493456 DPY19L2Q6NUT2 758 aa23.95■■□□□ 1.42
NUP50-218ENST00000493456 CCDC88AQ3V6T2 1871 aa23.94■■□□□ 1.42
NUP50-218ENST00000493456 DIAPH1O60610 1272 aaKnown RBP23.93■■□□□ 1.42
NUP50-218ENST00000493456 PDE6BP35913 854 aa23.93■■□□□ 1.42
NUP50-218ENST00000493456 BICDL1Q6ZP65 573 aa23.93■■□□□ 1.42
NUP50-218ENST00000493456 BRIP1Q9BX63 1249 aa23.93■■□□□ 1.42
NUP50-218ENST00000493456 ANKRD31Q8N7Z5 1873 aa23.92■■□□□ 1.42
NUP50-218ENST00000493456 HSPA1AP0DMV8 641 aaKnown RBP23.92■■□□□ 1.42
NUP50-218ENST00000493456 HSPA1BP0DMV9 641 aaKnown RBP23.92■■□□□ 1.42
NUP50-218ENST00000493456 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
NUP50-218ENST00000493456 TBC1D9BQ66K14 1250 aa23.91■■□□□ 1.42
NUP50-218ENST00000493456 ZNF622Q969S3 477 aaKnown RBP eCLIP23.91■■□□□ 1.42
NUP50-218ENST00000493456 TEX13AQ9BXU3 409 aaPredicted RBP23.91■■□□□ 1.42
NUP50-218ENST00000493456 POTECB2RU33 542 aa23.9■■□□□ 1.42
NUP50-218ENST00000493456 DICER1Q9UPY3 1922 aaKnown RBP23.9■■□□□ 1.42
NUP50-218ENST00000493456 COL11A2P13942 1736 aaPredicted RBP23.9■■□□□ 1.42
NUP50-218ENST00000493456 HEG1Q9ULI3 1381 aa23.9■■□□□ 1.42
NUP50-218ENST00000493456 FER1L6Q2WGJ9 1857 aa23.9■■□□□ 1.42
NUP50-218ENST00000493456 LTBP3Q9NS15 1303 aa23.89■■□□□ 1.42
NUP50-218ENST00000493456 CAPN15O75808 1086 aa23.89■■□□□ 1.41
NUP50-218ENST00000493456 ERFEQ4G0M1 354 aa23.89■■□□□ 1.41
NUP50-218ENST00000493456 C21orf2O43822 256 aa23.88■■□□□ 1.41
NUP50-218ENST00000493456 IL6STP40189 918 aaPredicted RBP23.88■■□□□ 1.41
NUP50-218ENST00000493456 TEFQ10587 303 aa23.88■■□□□ 1.41
NUP50-218ENST00000493456 PRR5LQ6MZQ0 368 aa23.88■■□□□ 1.41
NUP50-218ENST00000493456 ZNF790Q6PG37 636 aa23.88■■□□□ 1.41
NUP50-218ENST00000493456 ZNF496Q96IT1 587 aaPredicted RBP23.88■■□□□ 1.41
NUP50-218ENST00000493456 NPM2Q86SE8 214 aaKnown RBP23.86■■□□□ 1.41
NUP50-218ENST00000493456 GAS2L2Q8NHY3 880 aa23.86■■□□□ 1.41
NUP50-218ENST00000493456 TAOK3Q9H2K8 898 aa23.86■■□□□ 1.41
NUP50-218ENST00000493456 SIPA1L3O60292 1781 aaPredicted RBP23.86■■□□□ 1.41
NUP50-218ENST00000493456 CNBD1Q8NA66 436 aa23.85■■□□□ 1.41
NUP50-218ENST00000493456 CNKSR1Q969H4 720 aa23.85■■□□□ 1.41
NUP50-218ENST00000493456 CREBZFQ9NS37 354 aa23.85■■□□□ 1.41
NUP50-218ENST00000493456 TBC1D2BQ9UPU7 963 aa23.85■■□□□ 1.41
NUP50-218ENST00000493456 ZNF330Q9Y3S2 320 aaPredicted RBP23.85■■□□□ 1.41
NUP50-218ENST00000493456 KIF7Q2M1P5 1343 aa23.84■■□□□ 1.41
NUP50-218ENST00000493456 GNAT3A8MTJ3 354 aa23.84■■□□□ 1.41
NUP50-218ENST00000493456 SOGA3Q5TF21 947 aa23.84■■□□□ 1.41
NUP50-218ENST00000493456 CHADLQ6NUI6 762 aa23.84■■□□□ 1.41
NUP50-218ENST00000493456 SETDB2Q96T68 719 aa23.84■■□□□ 1.41
NUP50-218ENST00000493456 ZNF219Q9P2Y4 722 aaPredicted RBP23.84■■□□□ 1.41
NUP50-218ENST00000493456 COL3A1P02461 1466 aaPredicted RBP23.83■■□□□ 1.41
NUP50-218ENST00000493456 NPHP1O15259 732 aa23.83■■□□□ 1.41
NUP50-218ENST00000493456 ST5P78524 1137 aa23.83■■□□□ 1.41
NUP50-218ENST00000493456 STYK1Q6J9G0 422 aa23.83■■□□□ 1.41
NUP50-218ENST00000493456 FMNL2Q96PY5 1086 aa23.83■■□□□ 1.41
NUP50-218ENST00000493456 ARFGEF2Q9Y6D5 1785 aa23.83■■□□□ 1.4
NUP50-218ENST00000493456 IL17REQ8NFR9 667 aa23.82■■□□□ 1.4
NUP50-218ENST00000493456 BCORQ6W2J9 1755 aa23.82■■□□□ 1.4
NUP50-218ENST00000493456 PER1O15534 1290 aaPredicted RBP23.81■■□□□ 1.4
NUP50-218ENST00000493456 CAMTA2O94983 1202 aa23.81■■□□□ 1.4
NUP50-218ENST00000493456 CC2D1BQ5T0F9 858 aaKnown RBP23.81■■□□□ 1.4
NUP50-218ENST00000493456 PRPF40BQ6NWY9 871 aaKnown RBP23.81■■□□□ 1.4
NUP50-218ENST00000493456 CCDC24Q8N4L8 307 aa23.81■■□□□ 1.4
NUP50-218ENST00000493456 SRGNP10124 158 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms