RNA–Protein interactions for RNA: ENST00000493415.5

A1CF-210, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 926 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-210ENST00000493415 DDR1Q08345 913 aa7.98□□□□□ -1.13
A1CF-210ENST00000493415 RC3H1Q5TC82 1133 aaKnown RBP7.98□□□□□ -1.13
A1CF-210ENST00000493415 EYA1Q99502 592 aa7.98□□□□□ -1.13
A1CF-210ENST00000493415 USP42Q9H9J4 1324 aaKnown RBP7.98□□□□□ -1.13
A1CF-210ENST00000493415 FOXN1O15353 648 aa7.97□□□□□ -1.13
A1CF-210ENST00000493415 SLC24A1O60721 1099 aa7.97□□□□□ -1.13
A1CF-210ENST00000493415 ZPR1O75312 459 aa7.97□□□□□ -1.13
A1CF-210ENST00000493415 HSP90AB1P08238 724 aaKnown RBP7.97□□□□□ -1.13
A1CF-210ENST00000493415 FAM161AQ3B820 660 aa7.97□□□□□ -1.13
A1CF-210ENST00000493415 DPY19L2Q6NUT2 758 aa7.97□□□□□ -1.13
A1CF-210ENST00000493415 SLC4A9Q96Q91 983 aa7.97□□□□□ -1.13
A1CF-210ENST00000493415 TESK2Q96S53 571 aa7.97□□□□□ -1.13
A1CF-210ENST00000493415 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.97□□□□□ -1.134e-10■■■■□ 23.3
A1CF-210ENST00000493415 POLRMTO00411 1230 aaKnown RBP7.96□□□□□ -1.14
A1CF-210ENST00000493415 CTCFP49711 727 aaPredicted RBP7.96□□□□□ -1.14
A1CF-210ENST00000493415 ZNF530Q6P9A1 599 aaPredicted RBP7.96□□□□□ -1.14
A1CF-210ENST00000493415 CREBZFQ9NS37 354 aa7.96□□□□□ -1.14
A1CF-210ENST00000493415 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
A1CF-210ENST00000493415 SCN11AQ9UI33 1791 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 ERVV-2B6SEH9 535 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 TNNT2P45379 298 aaPredicted RBP7.95□□□□□ -1.14
A1CF-210ENST00000493415 C1orf141Q5JVX7 400 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 USPL1Q5W0Q7 1092 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 CHADLQ6NUI6 762 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 C2CD5Q86YS7 1000 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 TTLL6Q8N841 843 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 FER1L6Q2WGJ9 1857 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 ADAMTS7Q9UKP4 1686 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 COL11A2P13942 1736 aaPredicted RBP7.95□□□□□ -1.14
A1CF-210ENST00000493415 NRXN2Q9P2S2 1712 aa7.95□□□□□ -1.14
A1CF-210ENST00000493415 NPHP1O15259 732 aa7.94□□□□□ -1.14
A1CF-210ENST00000493415 ERFEQ4G0M1 354 aa7.94□□□□□ -1.14
A1CF-210ENST00000493415 PLEKHO1Q53GL0 409 aaPredicted RBP7.94□□□□□ -1.14
A1CF-210ENST00000493415 ZNF622Q969S3 477 aaKnown RBP eCLIP7.94□□□□□ -1.14
A1CF-210ENST00000493415 POLR3GLQ9BT43 218 aa7.94□□□□□ -1.14
A1CF-210ENST00000493415 PRDM10Q9NQV6 1147 aa7.94□□□□□ -1.14
A1CF-210ENST00000493415 WASHC2AQ641Q2 1341 aa7.94□□□□□ -1.14
A1CF-210ENST00000493415 CNTNAP1P78357 1384 aa7.94□□□□□ -1.14
A1CF-210ENST00000493415 ANKRD31Q8N7Z5 1873 aa7.94□□□□□ -1.14
A1CF-210ENST00000493415 H0YIN7 160 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 NFKBIEO00221 500 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 MTHFSP49914 203 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 LBX1P52954 281 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 EIF4A2Q14240 407 aaKnown RBP7.93□□□□□ -1.14
A1CF-210ENST00000493415 CDCA8Q53HL2 280 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 BICDL1Q6ZP65 573 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 CFAP44Q96MT7 982 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 PCNTO95613 3336 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 SCN4AP35499 1836 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 COL15A1P39059 1388 aa7.93□□□□□ -1.14
A1CF-210ENST00000493415 CCDC85CA6NKD9 419 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 SERPINB2P05120 415 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 POTEIP0CG38 1075 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 POTEJP0CG39 1038 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 NFIXQ14938 502 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 EAPPQ56P03 285 aaPredicted RBP7.92□□□□□ -1.14
A1CF-210ENST00000493415 PAXIP1Q6ZW49 1069 aaPredicted RBP7.92□□□□□ -1.14
A1CF-210ENST00000493415 ABHD8Q96I13 439 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 CARMIL3Q8ND23 1372 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 ARFGEF2Q9Y6D5 1785 aa7.92□□□□□ -1.14
A1CF-210ENST00000493415 C21orf2O43822 256 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 TM4SF1P30408 202 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 VEGFBP49765 207 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 AMOTQ4VCS5 1084 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 NFATC2IPQ8NCF5 419 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 TAOK3Q9H2K8 898 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 CLEC11AQ9Y240 323 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 ZNF330Q9Y3S2 320 aaPredicted RBP7.91□□□□□ -1.14
A1CF-210ENST00000493415 SOS1Q07889 1333 aaPredicted RBP7.91□□□□□ -1.14
A1CF-210ENST00000493415 SCN7AQ01118 1682 aa7.91□□□□□ -1.14
A1CF-210ENST00000493415 IQCA1LA6NCM1 817 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 TMEM88BA6NKF7 163 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 POTECB2RU33 542 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 DDNO94850 711 aaPredicted RBP7.9□□□□□ -1.14
A1CF-210ENST00000493415 MLLT1Q03111 559 aaPredicted RBP7.9□□□□□ -1.14
A1CF-210ENST00000493415 GRM1Q13255 1194 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 POLA2Q14181 598 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 INTS5Q6P9B9 1019 aaKnown RBP7.9□□□□□ -1.14
A1CF-210ENST00000493415 LDHDQ86WU2 507 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 CARD14Q9BXL6 1004 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 POLKQ9UBT6 870 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 ABT1Q9ULW3 272 aaKnown RBP7.9□□□□□ -1.14
A1CF-210ENST00000493415 ZBTB1Q9Y2K1 713 aa7.9□□□□□ -1.14
A1CF-210ENST00000493415 SLX4Q8IY92 1834 aa7.89□□□□□ -1.15
A1CF-210ENST00000493415 HSPA8P11142 646 aaKnown RBP7.89□□□□□ -1.15
A1CF-210ENST00000493415 CANXP27824 592 aaKnown RBP7.89□□□□□ -1.15
A1CF-210ENST00000493415 CCDC24Q8N4L8 307 aa7.89□□□□□ -1.15
A1CF-210ENST00000493415 BEGAINQ9BUH8 593 aa7.89□□□□□ -1.15
A1CF-210ENST00000493415 NARFQ9UHQ1 456 aa7.89□□□□□ -1.15
A1CF-210ENST00000493415 PDE6BP35913 854 aa7.88□□□□□ -1.15
A1CF-210ENST00000493415 SLC39A6Q13433 755 aa7.88□□□□□ -1.15
A1CF-210ENST00000493415 NPM2Q86SE8 214 aaKnown RBP7.88□□□□□ -1.15
A1CF-210ENST00000493415 AEBP1Q8IUX7 1158 aa7.88□□□□□ -1.15
A1CF-210ENST00000493415 TRPM7Q96QT4 1865 aa7.87□□□□□ -1.15
A1CF-210ENST00000493415 PASKQ96RG2 1323 aa7.87□□□□□ -1.15
A1CF-210ENST00000493415 ABCB7O75027 752 aa7.87□□□□□ -1.15
A1CF-210ENST00000493415 ST5P78524 1137 aa7.87□□□□□ -1.15
A1CF-210ENST00000493415 MAP2K1Q02750 393 aaPredicted RBP7.87□□□□□ -1.15
A1CF-210ENST00000493415 DEFB115Q30KQ5 88 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms