RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 AVPP01185 164 aa6.97□□□□□ -1.29
CLK1-213ENST00000492793 NOS2P35228 1153 aa6.97□□□□□ -1.29
CLK1-213ENST00000492793 PLA2G4AP47712 749 aa6.97□□□□□ -1.29
CLK1-213ENST00000492793 ZNF211Q13398 564 aaPredicted RBP6.97□□□□□ -1.29
CLK1-213ENST00000492793 TAS1R3Q7RTX0 852 aa6.97□□□□□ -1.29
CLK1-213ENST00000492793 PPARGC1BQ86YN6 1023 aaKnown RBP6.97□□□□□ -1.29
CLK1-213ENST00000492793 RHBDD1Q8TEB9 315 aa6.97□□□□□ -1.29
CLK1-213ENST00000492793 GTF3C2Q8WUA4 911 aaPredicted RBP6.97□□□□□ -1.29
CLK1-213ENST00000492793 GNEQ9Y223 722 aaKnown RBP6.97□□□□□ -1.29
CLK1-213ENST00000492793 HCN4Q9Y3Q4 1203 aa6.97□□□□□ -1.29
CLK1-213ENST00000492793 CCDC9Q9Y3X0 531 aaKnown RBP6.97□□□□□ -1.29
CLK1-213ENST00000492793 HRH3Q9Y5N1 445 aa6.97□□□□□ -1.29
CLK1-213ENST00000492793 TTLL8A6PVC2 850 aa6.96□□□□□ -1.3
CLK1-213ENST00000492793 GPC1P35052 558 aa6.96□□□□□ -1.3
CLK1-213ENST00000492793 RNF144AP50876 292 aaPredicted RBP6.96□□□□□ -1.3
CLK1-213ENST00000492793 LAPTM4AQ15012 233 aa6.96□□□□□ -1.3
CLK1-213ENST00000492793 FOXD4L5Q5VV16 416 aaPredicted RBP6.96□□□□□ -1.3
CLK1-213ENST00000492793 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
CLK1-213ENST00000492793 C2orf49Q9BVC5 232 aaPredicted RBP6.96□□□□□ -1.3
CLK1-213ENST00000492793 H3BRB1 525 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 ST8SIA5O15466 376 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 RHOQP17081 205 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 POU4F2Q12837 409 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 SH3PXD2AQ5TCZ1 1133 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 LYSMD3Q7Z3D4 306 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 GLYCTKQ8IVS8 523 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 ZFP42Q96MM3 310 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 IRX2Q9BZI1 471 aaPredicted RBP6.95□□□□□ -1.3
CLK1-213ENST00000492793 GRIP2Q9C0E4 1043 aa6.95□□□□□ -1.3
CLK1-213ENST00000492793 TUT1Q9H6E5 874 aaKnown RBP6.95□□□□□ -1.3
CLK1-213ENST00000492793 IQSEC3Q9UPP2 1182 aaPredicted RBP6.95□□□□□ -1.3
CLK1-213ENST00000492793 MTMR3Q13615 1198 aa6.94□□□□□ -1.3
CLK1-213ENST00000492793 TEAD4Q15561 434 aa6.94□□□□□ -1.3
CLK1-213ENST00000492793 C4orf17Q53FE4 359 aa6.94□□□□□ -1.3
CLK1-213ENST00000492793 C16orf46Q6P387 395 aa6.94□□□□□ -1.3
CLK1-213ENST00000492793 TRIM46Q7Z4K8 759 aa6.94□□□□□ -1.3
CLK1-213ENST00000492793 ZDHHC1Q8WTX9 485 aa6.94□□□□□ -1.3
CLK1-213ENST00000492793 SOWAHDA6NJG2 315 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 EML1O00423 815 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 SMCPP49901 116 aaPredicted RBP6.93□□□□□ -1.3
CLK1-213ENST00000492793 AAMPQ13685 434 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 NBPF1Q3BBV0 1214 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 SND1Q7KZF4 910 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLK1-213ENST00000492793 ALDH16A1Q8IZ83 802 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 STAG2Q8N3U4 1231 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 RNF217Q8TC41 542 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 PHACTR1Q9C0D0 580 aa6.93□□□□□ -1.3
CLK1-213ENST00000492793 DNMT3AQ9Y6K1 912 aaPredicted RBP6.93□□□□□ -1.3
CLK1-213ENST00000492793 MAN1A2O60476 641 aa6.92□□□□□ -1.3
CLK1-213ENST00000492793 MFAP1P55081 439 aaKnown RBP6.92□□□□□ -1.3
CLK1-213ENST00000492793 CCDC27Q2M243 656 aa6.92□□□□□ -1.3
CLK1-213ENST00000492793 BICDL1Q6ZP65 573 aa6.92□□□□□ -1.3
CLK1-213ENST00000492793 COL26A1Q96A83 441 aa6.92□□□□□ -1.3
CLK1-213ENST00000492793 SAP130Q9H0E3 1048 aa6.92□□□□□ -1.3
CLK1-213ENST00000492793 NEUROD4Q9HD90 331 aa6.92□□□□□ -1.3
CLK1-213ENST00000492793 TATP17735 454 aaPredicted RBP6.91□□□□□ -1.3
CLK1-213ENST00000492793 TXLNAP40222 546 aa6.91□□□□□ -1.3
CLK1-213ENST00000492793 FKBP4Q02790 459 aaKnown RBP eCLIP6.91□□□□□ -1.3
CLK1-213ENST00000492793 NBPF10Q6P3W6 841 aaKnown RBP6.91□□□□□ -1.3
CLK1-213ENST00000492793 RHPN1Q8TCX5 695 aa6.91□□□□□ -1.3
CLK1-213ENST00000492793 HELQQ8TDG4 1101 aa6.91□□□□□ -1.3
CLK1-213ENST00000492793 TIMMDC1Q9NPL8 285 aa6.91□□□□□ -1.3
CLK1-213ENST00000492793 ATP13A2Q9NQ11 1180 aa6.91□□□□□ -1.3
CLK1-213ENST00000492793 AAASQ9NRG9 546 aa6.91□□□□□ -1.3
CLK1-213ENST00000492793 EGFL7Q9UHF1 273 aa6.91□□□□□ -1.3
CLK1-213ENST00000492793 SOS2Q07890 1332 aaPredicted RBP6.91□□□□□ -1.3
CLK1-213ENST00000492793 SPATA31C2B4DYI2 1134 aa6.9□□□□□ -1.3
CLK1-213ENST00000492793 ICMTO60725 284 aa6.9□□□□□ -1.3
CLK1-213ENST00000492793 SF3B2Q13435 895 aaKnown RBP6.9□□□□□ -1.3
CLK1-213ENST00000492793 DGKZQ13574 1117 aa6.9□□□□□ -1.3
CLK1-213ENST00000492793 ARSJQ5FYB0 599 aaPredicted RBP6.9□□□□□ -1.3
CLK1-213ENST00000492793 COX20Q5RI15 118 aa6.9□□□□□ -1.3
CLK1-213ENST00000492793 GAS2L1Q99501 681 aaPredicted RBP6.9□□□□□ -1.3
CLK1-213ENST00000492793 QTRT2Q9H974 415 aaKnown RBP6.9□□□□□ -1.3
CLK1-213ENST00000492793 DACH1Q9UI36 760 aa6.9□□□□□ -1.3
CLK1-213ENST00000492793 SOBPA7XYQ1 873 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 BRD2P25440 801 aaKnown RBP6.89□□□□□ -1.31
CLK1-213ENST00000492793 RTN1Q16799 776 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 Q6ZNB5 142 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 CRIPAKQ8N1N5 446 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 GPAMQ9HCL2 828 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 KLK14Q9P0G3 267 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 DNMT3LQ9UJW3 386 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 GJA3Q9Y6H8 435 aa6.89□□□□□ -1.31
CLK1-213ENST00000492793 FAM13AO94988 1023 aa6.88□□□□□ -1.31
CLK1-213ENST00000492793 MPSTP25325 297 aa6.88□□□□□ -1.31
CLK1-213ENST00000492793 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.88□□□□□ -1.317e-11■■□□□ 12.3
CLK1-213ENST00000492793 C11orf91Q3C1V1 193 aa6.88□□□□□ -1.31
CLK1-213ENST00000492793 STIM2Q9P246 746 aa6.88□□□□□ -1.31
CLK1-213ENST00000492793 LRFN2Q9ULH4 789 aa6.88□□□□□ -1.31
CLK1-213ENST00000492793 HIRAP54198 1017 aaPredicted RBP6.87□□□□□ -1.31
CLK1-213ENST00000492793 ZNF295-AS1Q8N0V1 137 aa6.87□□□□□ -1.31
CLK1-213ENST00000492793 ABTB2Q8N961 1025 aa6.87□□□□□ -1.31
CLK1-213ENST00000492793 MYO19Q96H55 970 aa6.87□□□□□ -1.31
CLK1-213ENST00000492793 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
CLK1-213ENST00000492793 A0A1B0GTH6 734 aa6.86□□□□□ -1.31
CLK1-213ENST00000492793 MSX1P28360 303 aa6.86□□□□□ -1.31
CLK1-213ENST00000492793 MAPK1P28482 360 aa6.86□□□□□ -1.31
CLK1-213ENST00000492793 MARSP56192 900 aaKnown RBP6.86□□□□□ -1.31
CLK1-213ENST00000492793 NOM1Q5C9Z4 860 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms