RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 COL24A1Q17RW2 1714 aa9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 SOS1Q07889 1333 aaPredicted RBP9.5□□□□□ -0.89
PDLIM1-204ENST00000492511 ANP32CO43423 234 aa9.49□□□□□ -0.89
PDLIM1-204ENST00000492511 GYS1P13807 737 aa9.49□□□□□ -0.89
PDLIM1-204ENST00000492511 NEUROD2Q15784 382 aa9.49□□□□□ -0.89
PDLIM1-204ENST00000492511 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
PDLIM1-204ENST00000492511 SRP68Q9UHB9 627 aaKnown RBP9.49□□□□□ -0.89
PDLIM1-204ENST00000492511 MYH14Q7Z406 1995 aaKnown RBP9.49□□□□□ -0.89
PDLIM1-204ENST00000492511 UBR2Q8IWV8 1755 aa9.49□□□□□ -0.89
PDLIM1-204ENST00000492511 VIRMAQ69YN4 1812 aaKnown RBP9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 SENP3-EIF4A1A0A087X0R7 540 aa9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 STARD3NLO95772 234 aa9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 A1BGP04217 495 aa9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 RFC4P35249 363 aa9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 EIF5P55010 431 aaKnown RBP9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 ZNF784Q8NCA9 323 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 TEX13AQ9BXU3 409 aaPredicted RBP9.48□□□□□ -0.89
PDLIM1-204ENST00000492511 APAF1O14727 1248 aa9.47□□□□□ -0.89
PDLIM1-204ENST00000492511 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-204ENST00000492511 CANXP27824 592 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-204ENST00000492511 FKBP8Q14318 412 aa9.47□□□□□ -0.89
PDLIM1-204ENST00000492511 NLGN2Q8NFZ4 835 aa9.47□□□□□ -0.89
PDLIM1-204ENST00000492511 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
PDLIM1-204ENST00000492511 USP42Q9H9J4 1324 aaKnown RBP9.47□□□□□ -0.89
PDLIM1-204ENST00000492511 NBPF26B4DH59 902 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 GIGYF1O75420 1035 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 MMP10P09238 476 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 TM4SF1P30408 202 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 PIP4K2AP48426 406 aaPredicted RBP9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 USPL1Q5W0Q7 1092 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 NLGN1Q8N2Q7 840 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 MRS2Q9HD23 443 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 NARFQ9UHQ1 456 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 COL15A1P39059 1388 aa9.46□□□□□ -0.9
PDLIM1-204ENST00000492511 CHL1O00533 1208 aa9.45□□□□□ -0.9
PDLIM1-204ENST00000492511 IL6STP40189 918 aaPredicted RBP9.45□□□□□ -0.9
PDLIM1-204ENST00000492511 DDR1Q08345 913 aa9.45□□□□□ -0.9
PDLIM1-204ENST00000492511 LMOD3Q0VAK6 560 aa9.45□□□□□ -0.9
PDLIM1-204ENST00000492511 BABAM1Q9NWV8 329 aa9.45□□□□□ -0.9
PDLIM1-204ENST00000492511 TSPYL4Q9UJ04 414 aa9.45□□□□□ -0.9
PDLIM1-204ENST00000492511 CD2APQ9Y5K6 639 aa9.45□□□□□ -0.9
PDLIM1-204ENST00000492511 DLG5Q8TDM6 1919 aa9.44□□□□□ -0.9
PDLIM1-204ENST00000492511 C1QTNF8P60827 252 aa9.44□□□□□ -0.9
PDLIM1-204ENST00000492511 GPR162Q16538 588 aa9.44□□□□□ -0.9
PDLIM1-204ENST00000492511 KLHL34Q8N239 644 aa9.44□□□□□ -0.9
PDLIM1-204ENST00000492511 TBC1D2BQ9UPU7 963 aa9.44□□□□□ -0.9
PDLIM1-204ENST00000492511 POLRMTO00411 1230 aaKnown RBP9.43□□□□□ -0.9
PDLIM1-204ENST00000492511 ZPR1O75312 459 aa9.43□□□□□ -0.9
PDLIM1-204ENST00000492511 CAMTA2O94983 1202 aa9.43□□□□□ -0.9
PDLIM1-204ENST00000492511 ZNF853P0CG23 659 aa9.43□□□□□ -0.9
PDLIM1-204ENST00000492511 NFIXQ14938 502 aa9.43□□□□□ -0.9
PDLIM1-204ENST00000492511 KRT24Q2M2I5 525 aa9.43□□□□□ -0.9
PDLIM1-204ENST00000492511 C4AP0C0L4 1744 aa9.42□□□□□ -0.9
PDLIM1-204ENST00000492511 A0A087WZG4 1122 aa9.42□□□□□ -0.9
PDLIM1-204ENST00000492511 CFAP44Q96MT7 982 aa9.42□□□□□ -0.9
PDLIM1-204ENST00000492511 PARP3Q9Y6F1 533 aa9.42□□□□□ -0.9
PDLIM1-204ENST00000492511 KDM3BQ7LBC6 1761 aa9.42□□□□□ -0.9
PDLIM1-204ENST00000492511 PDIA6Q15084 440 aa9.41□□□□□ -0.9
PDLIM1-204ENST00000492511 TBC1D9BQ66K14 1250 aa9.41□□□□□ -0.9
PDLIM1-204ENST00000492511 LRP10Q7Z4F1 713 aa9.41□□□□□ -0.9
PDLIM1-204ENST00000492511 ZNF330Q9Y3S2 320 aaPredicted RBP9.41□□□□□ -0.9
PDLIM1-204ENST00000492511 LAS1LQ9Y4W2 734 aaKnown RBP9.41□□□□□ -0.9
PDLIM1-204ENST00000492511 YBX3P16989 372 aaKnown RBP eCLIP9.4□□□□□ -0.91e-6■■■□□ 18.9
PDLIM1-204ENST00000492511 KCNA3P22001 575 aa9.4□□□□□ -0.9
PDLIM1-204ENST00000492511 CCDC27Q2M243 656 aa9.4□□□□□ -0.9
PDLIM1-204ENST00000492511 PROSER3Q2NL68 480 aa9.4□□□□□ -0.9
PDLIM1-204ENST00000492511 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
PDLIM1-204ENST00000492511 WWC1Q8IX03 1113 aa9.4□□□□□ -0.9
PDLIM1-204ENST00000492511 PELP1Q8IZL8 1130 aaKnown RBP9.4□□□□□ -0.9
PDLIM1-204ENST00000492511 MBIPQ9NS73 344 aa9.4□□□□□ -0.9
PDLIM1-204ENST00000492511 C10orf71Q711Q0 1435 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 A0A0G2JLW4 131 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 SERPINB2P05120 415 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 EIF2S2P20042 333 aaKnown RBP9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 TGFB2P61812 414 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 HLFQ16534 295 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 NCBP3Q53F19 620 aaKnown RBP9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 BICDL1Q6ZP65 573 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 TTLL7Q6ZT98 887 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 FAM9BQ8IZU0 186 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 NGEFQ8N5V2 710 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 IFT57Q9NWB7 429 aa9.39□□□□□ -0.91
PDLIM1-204ENST00000492511 GRIN3BO60391 1043 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 ANXA1P04083 346 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 MYL6BP14649 208 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 DPEP1P16444 411 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 GNAI1P63096 354 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 NECTIN2Q92692 538 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 PXDNLA1KZ92 1463 aa9.38□□□□□ -0.91
PDLIM1-204ENST00000492511 ERBB4Q15303 1308 aa9.37□□□□□ -0.91
PDLIM1-204ENST00000492511 DUSP27Q5VZP5 1158 aa9.37□□□□□ -0.91
PDLIM1-204ENST00000492511 CLEC4GQ6UXB4 293 aa9.37□□□□□ -0.91
PDLIM1-204ENST00000492511 C8orf58Q8NAV2 365 aa9.37□□□□□ -0.91
PDLIM1-204ENST00000492511 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
PDLIM1-204ENST00000492511 CARMIL3Q8ND23 1372 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 221.3 ms