RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 COL8A1P27658 744 aa9.74□□□□□ -0.85
PHC3-213ENST00000491258 ARSJQ5FYB0 599 aaPredicted RBP9.74□□□□□ -0.85
PHC3-213ENST00000491258 NLRP8Q86W28 1048 aa9.74□□□□□ -0.85
PHC3-213ENST00000491258 DCDC2BA2VCK2 349 aa9.73□□□□□ -0.85
PHC3-213ENST00000491258 ARAFP10398 606 aa9.73□□□□□ -0.85
PHC3-213ENST00000491258 NBPF1Q3BBV0 1214 aa9.73□□□□□ -0.85
PHC3-213ENST00000491258 SUV39H2Q9H5I1 410 aa9.73□□□□□ -0.85
PHC3-213ENST00000491258 A0A1W2PNR3 127 aa9.72□□□□□ -0.85
PHC3-213ENST00000491258 EPXP11678 715 aa9.72□□□□□ -0.85
PHC3-213ENST00000491258 SOX11P35716 441 aa9.72□□□□□ -0.85
PHC3-213ENST00000491258 ALYREFQ86V81 257 aaKnown RBP9.72□□□□□ -0.85
PHC3-213ENST00000491258 BTBD6Q96KE9 485 aa9.72□□□□□ -0.85
PHC3-213ENST00000491258 CABP1Q9NZU7 370 aa9.72□□□□□ -0.85
PHC3-213ENST00000491258 TMEM229AB2RXF0 380 aa9.71□□□□□ -0.86
PHC3-213ENST00000491258 KHNYNO15037 678 aaKnown RBP9.71□□□□□ -0.86
PHC3-213ENST00000491258 HOXB4P17483 251 aaPredicted RBP9.71□□□□□ -0.86
PHC3-213ENST00000491258 TATP17735 454 aaPredicted RBP9.71□□□□□ -0.86
PHC3-213ENST00000491258 CD33P20138 364 aa9.71□□□□□ -0.86
PHC3-213ENST00000491258 LINC00114Q6XXX2 140 aa9.71□□□□□ -0.86
PHC3-213ENST00000491258 A6NJY4 79 aa9.7□□□□□ -0.86
PHC3-213ENST00000491258 PIK3CDO00329 1044 aa9.7□□□□□ -0.86
PHC3-213ENST00000491258 PIK3R2O00459 728 aa9.7□□□□□ -0.86
PHC3-213ENST00000491258 MAPTP10636 758 aaKnown RBP9.7□□□□□ -0.86
PHC3-213ENST00000491258 BAG6P46379 1132 aa9.7□□□□□ -0.86
PHC3-213ENST00000491258 GJA3Q9Y6H8 435 aa9.7□□□□□ -0.86
PHC3-213ENST00000491258 USP3Q9Y6I4 520 aa9.7□□□□□ -0.86
PHC3-213ENST00000491258 CDK2AP1O14519 115 aa9.69□□□□□ -0.86
PHC3-213ENST00000491258 GNB5O14775 395 aa9.69□□□□□ -0.86
PHC3-213ENST00000491258 TNP2Q05952 138 aa9.69□□□□□ -0.86
PHC3-213ENST00000491258 MCM6Q14566 821 aa9.69□□□□□ -0.86
PHC3-213ENST00000491258 SLC4A9Q96Q91 983 aa9.69□□□□□ -0.86
PHC3-213ENST00000491258 K7ELQ4 463 aaPredicted RBP9.68□□□□□ -0.86
PHC3-213ENST00000491258 SKIP12755 728 aa9.68□□□□□ -0.86
PHC3-213ENST00000491258 EML3Q32P44 896 aa9.68□□□□□ -0.86
PHC3-213ENST00000491258 ZDHHC3Q9NYG2 299 aa9.68□□□□□ -0.86
PHC3-213ENST00000491258 IQSEC3Q9UPP2 1182 aaPredicted RBP9.68□□□□□ -0.86
PHC3-213ENST00000491258 PARP3Q9Y6F1 533 aa9.68□□□□□ -0.86
PHC3-213ENST00000491258 ADH6P28332 368 aa9.67□□□□□ -0.86
PHC3-213ENST00000491258 MTFR1Q15390 333 aa9.67□□□□□ -0.86
PHC3-213ENST00000491258 BICDL1Q6ZP65 573 aa9.67□□□□□ -0.86
PHC3-213ENST00000491258 ZNF295-AS1Q8N0V1 137 aa9.67□□□□□ -0.86
PHC3-213ENST00000491258 ZIC5Q96T25 663 aa9.67□□□□□ -0.86
PHC3-213ENST00000491258 PCDHGA11Q9Y5H2 935 aa9.67□□□□□ -0.86
PHC3-213ENST00000491258 DGKGP49619 791 aa9.66□□□□□ -0.86
PHC3-213ENST00000491258 PSME1Q06323 249 aa9.66□□□□□ -0.86
PHC3-213ENST00000491258 CHSY3Q70JA7 882 aa9.66□□□□□ -0.86
PHC3-213ENST00000491258 HCN2Q9UL51 889 aa9.66□□□□□ -0.86
PHC3-213ENST00000491258 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
PHC3-213ENST00000491258 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.65□□□□□ -0.86
PHC3-213ENST00000491258 BACH1O14867 736 aa9.65□□□□□ -0.86
PHC3-213ENST00000491258 FAM182BQ5T319 152 aa9.65□□□□□ -0.86
PHC3-213ENST00000491258 Q8N3U1 123 aa9.65□□□□□ -0.86
PHC3-213ENST00000491258 NOP53Q9NZM5 478 aaKnown RBP9.65□□□□□ -0.86
PHC3-213ENST00000491258 KLF15Q9UIH9 416 aa9.65□□□□□ -0.86
PHC3-213ENST00000491258 PRR12Q9ULL5 1215 aa9.65□□□□□ -0.86
PHC3-213ENST00000491258 COG6Q9Y2V7 657 aa9.65□□□□□ -0.86
PHC3-213ENST00000491258 FURINP09958 794 aa9.64□□□□□ -0.87
PHC3-213ENST00000491258 FAM157BP0CG42 384 aa9.64□□□□□ -0.87
PHC3-213ENST00000491258 PCBP4P57723 403 aaKnown RBP9.64□□□□□ -0.87
PHC3-213ENST00000491258 GTF2IP78347 998 aa9.64□□□□□ -0.87
PHC3-213ENST00000491258 FCHSD1Q86WN1 690 aa9.64□□□□□ -0.87
PHC3-213ENST00000491258 KRTAP9-2Q9BYQ4 174 aa9.64□□□□□ -0.87
PHC3-213ENST00000491258 C1QTNF9BB2RNN3 333 aa9.63□□□□□ -0.87
PHC3-213ENST00000491258 TXLNAP40222 546 aa9.63□□□□□ -0.87
PHC3-213ENST00000491258 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.63□□□□□ -0.87
PHC3-213ENST00000491258 AVENQ9NQS1 362 aaPredicted RBP9.63□□□□□ -0.87
PHC3-213ENST00000491258 ZNF358Q9NW07 568 aa9.62□□□□□ -0.87
PHC3-213ENST00000491258 MARK1Q9P0L2 795 aa9.62□□□□□ -0.87
PHC3-213ENST00000491258 NCOA4Q13772 614 aa9.61□□□□□ -0.87
PHC3-213ENST00000491258 ZNF468Q5VIY5 522 aaPredicted RBP9.61□□□□□ -0.87
PHC3-213ENST00000491258 WWC1Q8IX03 1113 aa9.61□□□□□ -0.87
PHC3-213ENST00000491258 PSMG3-AS1Q96PY0 264 aa9.61□□□□□ -0.87
PHC3-213ENST00000491258 STRN4Q9NRL3 753 aa9.61□□□□□ -0.87
PHC3-213ENST00000491258 SCHIP1Q9P0W5 487 aaPredicted RBP9.61□□□□□ -0.87
PHC3-213ENST00000491258 LZTS3O60299 673 aaPredicted RBP9.6□□□□□ -0.87
PHC3-213ENST00000491258 SAMD5Q5TGI4 173 aa9.6□□□□□ -0.87
PHC3-213ENST00000491258 CD163Q86VB7 1156 aa9.6□□□□□ -0.87
PHC3-213ENST00000491258 DEPDC4Q8N2C3 294 aa9.6□□□□□ -0.87
PHC3-213ENST00000491258 ZDHHC1Q8WTX9 485 aa9.6□□□□□ -0.87
PHC3-213ENST00000491258 ALG2Q9H553 416 aa9.6□□□□□ -0.87
PHC3-213ENST00000491258 CHRNA4P43681 627 aa9.59□□□□□ -0.87
PHC3-213ENST00000491258 TBCELQ5QJ74 424 aa9.59□□□□□ -0.87
PHC3-213ENST00000491258 L3MBTL2Q969R5 705 aa9.59□□□□□ -0.87
PHC3-213ENST00000491258 ZNF232Q9UNY5 417 aa9.59□□□□□ -0.87
PHC3-213ENST00000491258 KRTAP9-6A0A140TA67 174 aa9.58□□□□□ -0.88
PHC3-213ENST00000491258 LAMC2Q13753 1193 aa9.58□□□□□ -0.88
PHC3-213ENST00000491258 TEAD4Q15561 434 aa9.58□□□□□ -0.88
PHC3-213ENST00000491258 LRRC69Q6ZNQ3 347 aa9.58□□□□□ -0.88
PHC3-213ENST00000491258 SLC9A9Q8IVB4 645 aa9.58□□□□□ -0.88
PHC3-213ENST00000491258 NFATC2IPQ8NCF5 419 aa9.58□□□□□ -0.88
PHC3-213ENST00000491258 NEUROD4Q9HD90 331 aa9.58□□□□□ -0.88
PHC3-213ENST00000491258 USP17L5A8MUK1 530 aa9.57□□□□□ -0.88
PHC3-213ENST00000491258 EFSO43281 561 aa9.57□□□□□ -0.88
PHC3-213ENST00000491258 NOS2P35228 1153 aa9.57□□□□□ -0.88
PHC3-213ENST00000491258 TNS4Q8IZW8 715 aa9.57□□□□□ -0.88
PHC3-213ENST00000491258 SYT9Q86SS6 491 aa9.56□□□□□ -0.88
PHC3-213ENST00000491258 TRIM11Q96F44 468 aa9.56□□□□□ -0.88
PHC3-213ENST00000491258 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
PHC3-213ENST00000491258 PLVAPQ9BX97 442 aa9.56□□□□□ -0.88
PHC3-213ENST00000491258 ELOA3CA0A087WX78 387 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms