RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 DNAJC10Q8IXB1 793 aa11.53□□□□□ -0.56
PCOLCE-209ENST00000490909 PARP3Q9Y6F1 533 aa11.53□□□□□ -0.56
PCOLCE-209ENST00000490909 DICER1Q9UPY3 1922 aaKnown RBP11.52□□□□□ -0.56
PCOLCE-209ENST00000490909 CHRNA5P30532 468 aa11.52□□□□□ -0.57
PCOLCE-209ENST00000490909 SLC52A2Q9HAB3 445 aa11.52□□□□□ -0.57
PCOLCE-209ENST00000490909 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
PCOLCE-209ENST00000490909 ZBTB1Q9Y2K1 713 aa11.52□□□□□ -0.57
PCOLCE-209ENST00000490909 FER1L6Q2WGJ9 1857 aa11.52□□□□□ -0.57
PCOLCE-209ENST00000490909 SLC39A6Q13433 755 aa11.51□□□□□ -0.57
PCOLCE-209ENST00000490909 AKAP4Q5JQC9 854 aa11.51□□□□□ -0.57
PCOLCE-209ENST00000490909 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
PCOLCE-209ENST00000490909 USPL1Q5W0Q7 1092 aa11.51□□□□□ -0.57
PCOLCE-209ENST00000490909 ARHGAP27Q6ZUM4 889 aa11.51□□□□□ -0.57
PCOLCE-209ENST00000490909 BCL2L12Q9HB09 334 aa11.51□□□□□ -0.57
PCOLCE-209ENST00000490909 RNMTO43148 476 aaKnown RBP11.5□□□□□ -0.57
PCOLCE-209ENST00000490909 HMOX1P09601 288 aa11.5□□□□□ -0.57
PCOLCE-209ENST00000490909 CYP19A1P11511 503 aaPredicted RBP11.5□□□□□ -0.57
PCOLCE-209ENST00000490909 PRELPP51888 382 aa11.5□□□□□ -0.57
PCOLCE-209ENST00000490909 TOMM70O94826 608 aa11.49□□□□□ -0.57
PCOLCE-209ENST00000490909 TM4SF1P30408 202 aa11.49□□□□□ -0.57
PCOLCE-209ENST00000490909 RASSF7Q02833 373 aa11.49□□□□□ -0.57
PCOLCE-209ENST00000490909 MTHFSDQ2M296 383 aaKnown RBP11.49□□□□□ -0.57
PCOLCE-209ENST00000490909 KNSTRNQ9Y448 316 aa11.49□□□□□ -0.57
PCOLCE-209ENST00000490909 LAMB4A4D0S4 1761 aa11.49□□□□□ -0.57
PCOLCE-209ENST00000490909 PER1O15534 1290 aaPredicted RBP11.48□□□□□ -0.57
PCOLCE-209ENST00000490909 HTRA3P83110 453 aa11.48□□□□□ -0.57
PCOLCE-209ENST00000490909 NFIXQ14938 502 aa11.48□□□□□ -0.57
PCOLCE-209ENST00000490909 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
PCOLCE-209ENST00000490909 PIM2Q9P1W9 311 aa11.48□□□□□ -0.57
PCOLCE-209ENST00000490909 APLP1P51693 650 aa11.47□□□□□ -0.57
PCOLCE-209ENST00000490909 DALRD3Q5D0E6 543 aaKnown RBP11.47□□□□□ -0.57
PCOLCE-209ENST00000490909 RNF181Q9P0P0 153 aa11.47□□□□□ -0.57
PCOLCE-209ENST00000490909 SLX4Q8IY92 1834 aa11.46□□□□□ -0.57
PCOLCE-209ENST00000490909 NARFQ9UHQ1 456 aa11.46□□□□□ -0.57
PCOLCE-209ENST00000490909 DLG5Q8TDM6 1919 aa11.45□□□□□ -0.58
PCOLCE-209ENST00000490909 CC2D1BQ5T0F9 858 aaKnown RBP11.45□□□□□ -0.58
PCOLCE-209ENST00000490909 RBM46Q8TBY0 533 aaKnown RBP11.45□□□□□ -0.58
PCOLCE-209ENST00000490909 CEMIPQ8WUJ3 1361 aa11.44□□□□□ -0.58
PCOLCE-209ENST00000490909 NPC1L1Q9UHC9 1359 aa11.44□□□□□ -0.58
PCOLCE-209ENST00000490909 NFKBIEO00221 500 aa11.44□□□□□ -0.58
PCOLCE-209ENST00000490909 ZPR1O75312 459 aa11.44□□□□□ -0.58
PCOLCE-209ENST00000490909 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
PCOLCE-209ENST00000490909 HEG1Q9ULI3 1381 aa11.43□□□□□ -0.58
PCOLCE-209ENST00000490909 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
PCOLCE-209ENST00000490909 EIF5P55010 431 aaKnown RBP11.43□□□□□ -0.58
PCOLCE-209ENST00000490909 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
PCOLCE-209ENST00000490909 ZNF496Q96IT1 587 aaPredicted RBP11.43□□□□□ -0.58
PCOLCE-209ENST00000490909 KDM2BQ8NHM5 1336 aa11.42□□□□□ -0.58
PCOLCE-209ENST00000490909 ZC3H4Q9UPT8 1303 aaKnown RBP11.42□□□□□ -0.58
PCOLCE-209ENST00000490909 SERPINB2P05120 415 aa11.42□□□□□ -0.58
PCOLCE-209ENST00000490909 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
PCOLCE-209ENST00000490909 IL17REQ8NFR9 667 aa11.42□□□□□ -0.58
PCOLCE-209ENST00000490909 TBC1D9BQ66K14 1250 aa11.41□□□□□ -0.58
PCOLCE-209ENST00000490909 RRAGCQ9HB90 399 aa11.41□□□□□ -0.58
PCOLCE-209ENST00000490909 FSTL1Q12841 308 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 PRR5LQ6MZQ0 368 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 ZNF790Q6PG37 636 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 C2CD5Q86YS7 1000 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 JMYQ8N9B5 988 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 KLRG1Q96E93 195 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 ADAMTSL1Q8N6G6 1762 aa11.4□□□□□ -0.58
PCOLCE-209ENST00000490909 POTECB2RU33 542 aa11.39□□□□□ -0.59
PCOLCE-209ENST00000490909 KCNQ3O43525 872 aa11.39□□□□□ -0.59
PCOLCE-209ENST00000490909 LMNB1P20700 586 aa11.39□□□□□ -0.59
PCOLCE-209ENST00000490909 NUP98P52948 1817 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 PRAMEF22A3QJZ6 481 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 U2SURPO15042 1029 aaKnown RBP11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 CAMTA2O94983 1202 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 CNGB1Q14028 1251 aaPredicted RBP11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 C16orf71Q8IYS4 520 aaPredicted RBP11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 TTC5Q8N0Z6 440 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 TTLL6Q8N841 843 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 GAS2L2Q8NHY3 880 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 PHACTR3Q96KR7 559 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 RSPH6AQ9H0K4 717 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 TBC1D2BQ9UPU7 963 aa11.38□□□□□ -0.59
PCOLCE-209ENST00000490909 SCN4AP35499 1836 aa11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 SNED1Q8TER0 1413 aa11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 GNAT3A8MTJ3 354 aa11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 PIP4K2AP48426 406 aaPredicted RBP11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 TEFQ10587 303 aa11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 SMC1BQ8NDV3 1235 aa11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 ZNF330Q9Y3S2 320 aaPredicted RBP11.37□□□□□ -0.59
PCOLCE-209ENST00000490909 STARD3NLO95772 234 aa11.36□□□□□ -0.59
PCOLCE-209ENST00000490909 A1BGP04217 495 aa11.36□□□□□ -0.59
PCOLCE-209ENST00000490909 PRKAR2BP31323 418 aa11.36□□□□□ -0.59
PCOLCE-209ENST00000490909 IL6STP40189 918 aaPredicted RBP11.36□□□□□ -0.59
PCOLCE-209ENST00000490909 COL4A5P29400 1685 aa11.36□□□□□ -0.59
PCOLCE-209ENST00000490909 LTBP3Q9NS15 1303 aa11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 A0A087WZG4 1122 aa11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 H0YIN7 160 aa11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 C21orf2O43822 256 aa11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 COL13A1Q5TAT6 717 aaPredicted RBP11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 FMNL2Q96PY5 1086 aa11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 BRIP1Q9BX63 1249 aa11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
PCOLCE-209ENST00000490909 LTBP1Q14766 1721 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms