RNA–Protein interactions for RNA: ENST00000490230.1

PBXIP1-204, Transcript of PBX homeobox interacting protein 1, humanhuman

TSL 5

Gene PBXIP1, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBXIP1-204ENST00000490230 NEUROD2Q15784 382 aa25.21■■□□□ 1.63
PBXIP1-204ENST00000490230 NLGN2Q8NFZ4 835 aa25.21■■□□□ 1.63
PBXIP1-204ENST00000490230 DCAF8L1A6NGE4 600 aa25.2■■□□□ 1.62
PBXIP1-204ENST00000490230 STARD3NLO95772 234 aa25.2■■□□□ 1.62
PBXIP1-204ENST00000490230 SOS1Q07889 1333 aaPredicted RBP25.19■■□□□ 1.62
PBXIP1-204ENST00000490230 PRAMEF22A3QJZ6 481 aa25.19■■□□□ 1.62
PBXIP1-204ENST00000490230 GYS1P13807 737 aa25.19■■□□□ 1.62
PBXIP1-204ENST00000490230 TMPOP42166 694 aaKnown RBP25.19■■□□□ 1.62
PBXIP1-204ENST00000490230 CCDC184Q52MB2 194 aa25.19■■□□□ 1.62
PBXIP1-204ENST00000490230 MMP10P09238 476 aa25.18■■□□□ 1.62
PBXIP1-204ENST00000490230 NLGN1Q8N2Q7 840 aa25.17■■□□□ 1.62
PBXIP1-204ENST00000490230 RUNDC1Q96C34 613 aa25.17■■□□□ 1.62
PBXIP1-204ENST00000490230 TEX13AQ9BXU3 409 aaPredicted RBP25.17■■□□□ 1.62
PBXIP1-204ENST00000490230 ZNF330Q9Y3S2 320 aaPredicted RBP25.17■■□□□ 1.62
PBXIP1-204ENST00000490230 COL15A1P39059 1388 aa25.16■■□□□ 1.62
PBXIP1-204ENST00000490230 USP42Q9H9J4 1324 aaKnown RBP25.15■■□□□ 1.62
PBXIP1-204ENST00000490230 ANP32CO43423 234 aa25.15■■□□□ 1.62
PBXIP1-204ENST00000490230 A1BGP04217 495 aa25.15■■□□□ 1.62
PBXIP1-204ENST00000490230 PELP1Q8IZL8 1130 aaKnown RBP25.15■■□□□ 1.62
PBXIP1-204ENST00000490230 USP16Q9Y5T5 823 aa25.15■■□□□ 1.62
PBXIP1-204ENST00000490230 KDM3BQ7LBC6 1761 aa25.14■■□□□ 1.62
PBXIP1-204ENST00000490230 ZPR1O75312 459 aa25.14■■□□□ 1.62
PBXIP1-204ENST00000490230 PIP4K2AP48426 406 aaPredicted RBP25.14■■□□□ 1.62
PBXIP1-204ENST00000490230 FKBP8Q14318 412 aa25.14■■□□□ 1.62
PBXIP1-204ENST00000490230 USPL1Q5W0Q7 1092 aa25.14■■□□□ 1.62
PBXIP1-204ENST00000490230 SNRPA1P09661 255 aaKnown RBP25.13■■□□□ 1.61
PBXIP1-204ENST00000490230 PNISRQ8TF01 805 aaKnown RBP25.11■■□□□ 1.61
PBXIP1-204ENST00000490230 CD2APQ9Y5K6 639 aa25.11■■□□□ 1.61
PBXIP1-204ENST00000490230 EIF5P55010 431 aaKnown RBP25.1■■□□□ 1.61
PBXIP1-204ENST00000490230 LMOD3Q0VAK6 560 aa25.1■■□□□ 1.61
PBXIP1-204ENST00000490230 GPR162Q16538 588 aa25.1■■□□□ 1.61
PBXIP1-204ENST00000490230 NARFQ9UHQ1 456 aa25.1■■□□□ 1.61
PBXIP1-204ENST00000490230 PARP3Q9Y6F1 533 aa25.1■■□□□ 1.61
PBXIP1-204ENST00000490230 WWC3Q9ULE0 1092 aa25.09■■□□□ 1.61
PBXIP1-204ENST00000490230 TSPYL4Q9UJ04 414 aa25.08■■□□□ 1.61
PBXIP1-204ENST00000490230 TRIM35Q9UPQ4 493 aa25.08■■□□□ 1.61
PBXIP1-204ENST00000490230 TBC1D2BQ9UPU7 963 aa25.08■■□□□ 1.61
PBXIP1-204ENST00000490230 SENP3-EIF4A1A0A087X0R7 540 aa25.07■■□□□ 1.6
PBXIP1-204ENST00000490230 EIF4A1P60842 406 aaKnown RBP25.07■■□□□ 1.6
PBXIP1-204ENST00000490230 DDR1Q08345 913 aa25.07■■□□□ 1.6
PBXIP1-204ENST00000490230 MRS2Q9HD23 443 aa25.07■■□□□ 1.6
PBXIP1-204ENST00000490230 A0A087WZG4 1122 aa25.06■■□□□ 1.6
PBXIP1-204ENST00000490230 APAF1O14727 1248 aa25.06■■□□□ 1.6
PBXIP1-204ENST00000490230 IL6STP40189 918 aaPredicted RBP25.06■■□□□ 1.6
PBXIP1-204ENST00000490230 NPM2Q86SE8 214 aaKnown RBP25.06■■□□□ 1.6
PBXIP1-204ENST00000490230 BCL2L12Q9HB09 334 aa25.06■■□□□ 1.6
PBXIP1-204ENST00000490230 LAS1LQ9Y4W2 734 aaKnown RBP25.06■■□□□ 1.6
PBXIP1-204ENST00000490230 LAMB4A4D0S4 1761 aa25.05■■□□□ 1.6
PBXIP1-204ENST00000490230 BICDL1Q6ZP65 573 aa25.04■■□□□ 1.6
PBXIP1-204ENST00000490230 GIGYF1O75420 1035 aaPredicted RBP25.03■■□□□ 1.6
PBXIP1-204ENST00000490230 TM4SF1P30408 202 aa25.03■■□□□ 1.6
PBXIP1-204ENST00000490230 NFIXQ14938 502 aa25.03■■□□□ 1.6
PBXIP1-204ENST00000490230 N4BP2Q86UW6 1770 aaPredicted RBP25.03■■□□□ 1.6
PBXIP1-204ENST00000490230 NBPF26B4DH59 902 aa25.02■■□□□ 1.6
PBXIP1-204ENST00000490230 YBX3P16989 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
PBXIP1-204ENST00000490230 NBPF10Q6P3W6 841 aaKnown RBP25.02■■□□□ 1.6
PBXIP1-204ENST00000490230 NBPF15Q8N660 670 aa25.02■■□□□ 1.6
PBXIP1-204ENST00000490230 KIF13BQ9NQT8 1826 aa25.01■■□□□ 1.59
PBXIP1-204ENST00000490230 POLRMTO00411 1230 aaKnown RBP25.01■■□□□ 1.59
PBXIP1-204ENST00000490230 SCN7AQ01118 1682 aa25.01■■□□□ 1.59
PBXIP1-204ENST00000490230 DZIP3Q86Y13 1208 aaKnown RBP25■■□□□ 1.59
PBXIP1-204ENST00000490230 NGEFQ8N5V2 710 aa25■■□□□ 1.59
PBXIP1-204ENST00000490230 C10orf71Q711Q0 1435 aa25■■□□□ 1.59
PBXIP1-204ENST00000490230 AFDNP55196 1824 aaKnown RBP25■■□□□ 1.59
PBXIP1-204ENST00000490230 A0A0G2JLW4 131 aa24.98■■□□□ 1.59
PBXIP1-204ENST00000490230 YY1P25490 414 aa24.98■■□□□ 1.59
PBXIP1-204ENST00000490230 TBC1D9BQ66K14 1250 aa24.98■■□□□ 1.59
PBXIP1-204ENST00000490230 KIAA1551Q9HCM1 1747 aa24.98■■□□□ 1.59
PBXIP1-204ENST00000490230 CAMTA2O94983 1202 aa24.97■■□□□ 1.59
PBXIP1-204ENST00000490230 BCORQ6W2J9 1755 aa24.97■■□□□ 1.59
PBXIP1-204ENST00000490230 PXDNLA1KZ92 1463 aa24.96■■□□□ 1.59
PBXIP1-204ENST00000490230 CHL1O00533 1208 aa24.96■■□□□ 1.59
PBXIP1-204ENST00000490230 SERPINB2P05120 415 aa24.96■■□□□ 1.59
PBXIP1-204ENST00000490230 DPEP1P16444 411 aa24.96■■□□□ 1.59
PBXIP1-204ENST00000490230 EIF2S2P20042 333 aaKnown RBP24.96■■□□□ 1.59
PBXIP1-204ENST00000490230 KRT24Q2M2I5 525 aa24.96■■□□□ 1.59
PBXIP1-204ENST00000490230 BABAM1Q9NWV8 329 aa24.96■■□□□ 1.59
PBXIP1-204ENST00000490230 MYL6BP14649 208 aa24.95■■□□□ 1.58
PBXIP1-204ENST00000490230 NECTIN2Q92692 538 aa24.95■■□□□ 1.58
PBXIP1-204ENST00000490230 TGFB2P61812 414 aa24.94■■□□□ 1.58
PBXIP1-204ENST00000490230 CHD4Q14839 1912 aa24.94■■□□□ 1.58
PBXIP1-204ENST00000490230 NRXN2Q9P2S2 1712 aa24.92■■□□□ 1.58
PBXIP1-204ENST00000490230 CHRNA5P30532 468 aa24.91■■□□□ 1.58
PBXIP1-204ENST00000490230 CCDC24Q8N4L8 307 aa24.91■■□□□ 1.58
PBXIP1-204ENST00000490230 GRIN3BO60391 1043 aa24.9■■□□□ 1.58
PBXIP1-204ENST00000490230 ANXA1P04083 346 aa24.9■■□□□ 1.58
PBXIP1-204ENST00000490230 FAM9BQ8IZU0 186 aa24.9■■□□□ 1.58
PBXIP1-204ENST00000490230 CFAP44Q96MT7 982 aa24.9■■□□□ 1.58
PBXIP1-204ENST00000490230 SETDB2Q96T68 719 aa24.9■■□□□ 1.58
PBXIP1-204ENST00000490230 MBIPQ9NS73 344 aa24.9■■□□□ 1.58
PBXIP1-204ENST00000490230 HLFQ16534 295 aa24.89■■□□□ 1.58
PBXIP1-204ENST00000490230 TTLL7Q6ZT98 887 aa24.89■■□□□ 1.58
PBXIP1-204ENST00000490230 BCS1LQ9Y276 419 aa24.89■■□□□ 1.58
PBXIP1-204ENST00000490230 SALL2Q9Y467 1007 aaPredicted RBP24.88■■□□□ 1.57
PBXIP1-204ENST00000490230 CARMIL3Q8ND23 1372 aa24.88■■□□□ 1.57
PBXIP1-204ENST00000490230 KCNA3P22001 575 aa24.87■■□□□ 1.57
PBXIP1-204ENST00000490230 PROSER3Q2NL68 480 aa24.87■■□□□ 1.57
PBXIP1-204ENST00000490230 ZNF652Q9Y2D9 606 aa24.87■■□□□ 1.57
PBXIP1-204ENST00000490230 BRCA1P38398 1863 aaKnown RBP24.87■■□□□ 1.57
PBXIP1-204ENST00000490230 NPHP1O15259 732 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms