RNA–Protein interactions for RNA: ENST00000489647.4

POLR1D-206, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 1 (best) BASIC

Gene POLR1D, Length 1,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-206ENST00000489647 USP21Q9UK80 565 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 SOS1Q07889 1333 aaPredicted RBP13.76□□□□□ -0.21
POLR1D-206ENST00000489647 VPS72Q15906 364 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 NECTIN2Q92692 538 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 COG6Q9Y2V7 657 aa13.76□□□□□ -0.21
POLR1D-206ENST00000489647 ERVV-2B6SEH9 535 aa13.75□□□□□ -0.21
POLR1D-206ENST00000489647 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
POLR1D-206ENST00000489647 ZNF790Q6PG37 636 aa13.75□□□□□ -0.21
POLR1D-206ENST00000489647 DZIP1LQ8IYY4 767 aaKnown RBP13.75□□□□□ -0.21
POLR1D-206ENST00000489647 C5P01031 1676 aa13.74□□□□□ -0.21
POLR1D-206ENST00000489647 MS4A1P11836 297 aa13.74□□□□□ -0.21
POLR1D-206ENST00000489647 DDB1Q16531 1140 aa13.74□□□□□ -0.21
POLR1D-206ENST00000489647 CCDC30Q5VVM6 783 aa13.74□□□□□ -0.21
POLR1D-206ENST00000489647 BARGINQ6ZT62 677 aa13.74□□□□□ -0.21
POLR1D-206ENST00000489647 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 CCDC136Q96JN2 1154 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 STK31Q9BXU1 1019 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 UBR2Q8IWV8 1755 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 AFF2P51816 1311 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 HOXB7P09629 217 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 EIF2S2P20042 333 aaKnown RBP13.73□□□□□ -0.21
POLR1D-206ENST00000489647 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
POLR1D-206ENST00000489647 TTC5Q8N0Z6 440 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 ARHGAP45Q92619 1136 aa13.73□□□□□ -0.21
POLR1D-206ENST00000489647 HEG1Q9ULI3 1381 aa13.72□□□□□ -0.21
POLR1D-206ENST00000489647 GIGYF1O75420 1035 aaPredicted RBP13.72□□□□□ -0.21
POLR1D-206ENST00000489647 PRAMEF22A3QJZ6 481 aa13.71□□□□□ -0.21
POLR1D-206ENST00000489647 MVPQ14764 893 aaKnown RBP13.71□□□□□ -0.21
POLR1D-206ENST00000489647 TMOD3Q9NYL9 352 aa13.71□□□□□ -0.21
POLR1D-206ENST00000489647 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
POLR1D-206ENST00000489647 G2E3Q7L622 706 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 ITPRIPQ8IWB1 547 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 TMEM57Q8N5G2 664 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 ZNF496Q96IT1 587 aaPredicted RBP13.7□□□□□ -0.22
POLR1D-206ENST00000489647 API5Q9BZZ5 524 aaKnown RBP13.7□□□□□ -0.22
POLR1D-206ENST00000489647 LAMB4A4D0S4 1761 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 A0A0G2JS52 829 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 GLI3P10071 1580 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 MYT1Q01538 1121 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
POLR1D-206ENST00000489647 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
POLR1D-206ENST00000489647 ABCC4O15439 1325 aa13.69□□□□□ -0.22
POLR1D-206ENST00000489647 PTPRCP08575 1304 aa13.69□□□□□ -0.22
POLR1D-206ENST00000489647 CHMP4AQ9BY43 222 aa13.69□□□□□ -0.22
POLR1D-206ENST00000489647 CHPF2Q9P2E5 772 aa13.69□□□□□ -0.22
POLR1D-206ENST00000489647 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
POLR1D-206ENST00000489647 RGS12O14924 1447 aa13.68□□□□□ -0.22
POLR1D-206ENST00000489647 KCPQ6ZWJ8 1503 aa13.68□□□□□ -0.22
POLR1D-206ENST00000489647 MARCH10Q8NA82 808 aaPredicted RBP13.68□□□□□ -0.22
POLR1D-206ENST00000489647 FLIIQ13045 1269 aa13.67□□□□□ -0.22
POLR1D-206ENST00000489647 PIGBQ92521 554 aa13.67□□□□□ -0.22
POLR1D-206ENST00000489647 SYTL4Q96C24 671 aaPredicted RBP13.67□□□□□ -0.22
POLR1D-206ENST00000489647 DDX19BQ9UMR2 479 aa13.67□□□□□ -0.22
POLR1D-206ENST00000489647 ATRNO75882 1429 aa13.67□□□□□ -0.22
POLR1D-206ENST00000489647 ANXA1P04083 346 aa13.67□□□□□ -0.22
POLR1D-206ENST00000489647 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
POLR1D-206ENST00000489647 GJD4Q96KN9 370 aaPredicted RBP13.67□□□□□ -0.22
POLR1D-206ENST00000489647 TRPC5Q9UL62 973 aaPredicted RBP13.67□□□□□ -0.22
POLR1D-206ENST00000489647 BCL9O00512 1426 aa13.66□□□□□ -0.22
POLR1D-206ENST00000489647 PTCD1O75127 700 aaKnown RBP13.66□□□□□ -0.22
POLR1D-206ENST00000489647 PRIM1P49642 420 aaKnown RBP13.66□□□□□ -0.22
POLR1D-206ENST00000489647 FKBP5Q13451 457 aaPredicted RBP13.66□□□□□ -0.22
POLR1D-206ENST00000489647 PHAXQ9H814 394 aaKnown RBP13.66□□□□□ -0.22
POLR1D-206ENST00000489647 DBF4Q9UBU7 674 aaPredicted RBP13.66□□□□□ -0.22
POLR1D-206ENST00000489647 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
POLR1D-206ENST00000489647 PROSER3Q2NL68 480 aa13.65□□□□□ -0.22
POLR1D-206ENST00000489647 ASAP1Q9ULH1 1129 aa13.65□□□□□ -0.22
POLR1D-206ENST00000489647 F6X3S4 739 aa13.64□□□□□ -0.23
POLR1D-206ENST00000489647 ACSBG1Q96GR2 724 aa13.64□□□□□ -0.23
POLR1D-206ENST00000489647 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
POLR1D-206ENST00000489647 USP16Q9Y5T5 823 aa13.64□□□□□ -0.23
POLR1D-206ENST00000489647 AAMPQ13685 434 aa13.64□□□□□ -0.23
POLR1D-206ENST00000489647 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
POLR1D-206ENST00000489647 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
POLR1D-206ENST00000489647 QTRT2Q9H974 415 aaKnown RBP13.63□□□□□ -0.23
POLR1D-206ENST00000489647 DDX21Q9NR30 783 aaKnown RBP eCLIP13.62□□□□□ -0.23
POLR1D-206ENST00000489647 HYPKQ9NX55 129 aa13.62□□□□□ -0.23
POLR1D-206ENST00000489647 MYL6BP14649 208 aa13.61□□□□□ -0.23
POLR1D-206ENST00000489647 PDIA6Q15084 440 aa13.61□□□□□ -0.23
POLR1D-206ENST00000489647 ZBTB40Q9NUA8 1239 aa13.61□□□□□ -0.23
POLR1D-206ENST00000489647 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
POLR1D-206ENST00000489647 BRWD3Q6RI45 1802 aa13.61□□□□□ -0.23
POLR1D-206ENST00000489647 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
POLR1D-206ENST00000489647 PIP4K2AP48426 406 aaPredicted RBP13.61□□□□□ -0.23
POLR1D-206ENST00000489647 PXDNLA1KZ92 1463 aa13.6□□□□□ -0.23
POLR1D-206ENST00000489647 SBF2Q86WG5 1849 aa13.6□□□□□ -0.23
POLR1D-206ENST00000489647 CCT4P50991 539 aaKnown RBP13.6□□□□□ -0.23
POLR1D-206ENST00000489647 CHMP4BQ9H444 224 aaKnown RBP13.6□□□□□ -0.23
POLR1D-206ENST00000489647 PI4KAP2A4QPH2 592 aa13.59□□□□□ -0.23
POLR1D-206ENST00000489647 KCNQ2O43526 872 aa13.59□□□□□ -0.23
POLR1D-206ENST00000489647 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
POLR1D-206ENST00000489647 AIMP1Q12904 312 aaKnown RBP13.59□□□□□ -0.23
POLR1D-206ENST00000489647 FAM182BQ5T319 152 aa13.59□□□□□ -0.23
POLR1D-206ENST00000489647 SEPT12Q8IYM1 358 aa13.59□□□□□ -0.23
POLR1D-206ENST00000489647 PI4KAP1Q8N8J0 262 aa13.59□□□□□ -0.23
POLR1D-206ENST00000489647 FBXO41Q8TF61 875 aa13.59□□□□□ -0.23
POLR1D-206ENST00000489647 KDM2BQ8NHM5 1336 aa13.59□□□□□ -0.23
POLR1D-206ENST00000489647 TJP1Q07157 1748 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms