RNA–Protein interactions for RNA: ENST00000488964.5

CYTH3-209, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-209ENST00000488964 SNRPA1P09661 255 aaKnown RBP19.78■□□□□ 0.76
CYTH3-209ENST00000488964 NEUROD2Q15784 382 aa19.77■□□□□ 0.76
CYTH3-209ENST00000488964 INTS5Q6P9B9 1019 aaKnown RBP19.77■□□□□ 0.76
CYTH3-209ENST00000488964 AMIGO3Q86WK7 504 aa19.77■□□□□ 0.76
CYTH3-209ENST00000488964 MRS2Q9HD23 443 aa19.77■□□□□ 0.76
CYTH3-209ENST00000488964 BABAM1Q9NWV8 329 aa19.76■□□□□ 0.75
CYTH3-209ENST00000488964 SOS1Q07889 1333 aaPredicted RBP19.76■□□□□ 0.75
CYTH3-209ENST00000488964 COL15A1P39059 1388 aa19.75■□□□□ 0.75
CYTH3-209ENST00000488964 CANXP27824 592 aaKnown RBP19.75■□□□□ 0.75
CYTH3-209ENST00000488964 SMIM5Q71RC9 77 aa19.75■□□□□ 0.75
CYTH3-209ENST00000488964 SYT17Q9BSW7 474 aa19.75■□□□□ 0.75
CYTH3-209ENST00000488964 TSPYL4Q9UJ04 414 aa19.75■□□□□ 0.75
CYTH3-209ENST00000488964 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
CYTH3-209ENST00000488964 CALD1Q05682 793 aaKnown RBP19.74■□□□□ 0.75
CYTH3-209ENST00000488964 THUMPD2Q9BTF0 503 aaKnown RBP19.74■□□□□ 0.75
CYTH3-209ENST00000488964 RRP7AQ9Y3A4 280 aaKnown RBP19.74■□□□□ 0.75
CYTH3-209ENST00000488964 USP42Q9H9J4 1324 aaKnown RBP19.74■□□□□ 0.75
CYTH3-209ENST00000488964 C4AP0C0L4 1744 aa19.73■□□□□ 0.75
CYTH3-209ENST00000488964 KCNQ3O43525 872 aa19.73■□□□□ 0.75
CYTH3-209ENST00000488964 ZNF330Q9Y3S2 320 aaPredicted RBP19.73■□□□□ 0.75
CYTH3-209ENST00000488964 MMP10P09238 476 aa19.72■□□□□ 0.75
CYTH3-209ENST00000488964 GYS1P13807 737 aa19.72■□□□□ 0.75
CYTH3-209ENST00000488964 CD2APQ9Y5K6 639 aa19.72■□□□□ 0.75
CYTH3-209ENST00000488964 PARP3Q9Y6F1 533 aa19.72■□□□□ 0.75
CYTH3-209ENST00000488964 KDM3BQ7LBC6 1761 aa19.71■□□□□ 0.75
CYTH3-209ENST00000488964 IL6STP40189 918 aaPredicted RBP19.71■□□□□ 0.75
CYTH3-209ENST00000488964 MIS18AQ9NYP9 233 aa19.7■□□□□ 0.74
CYTH3-209ENST00000488964 NARFQ9UHQ1 456 aa19.7■□□□□ 0.74
CYTH3-209ENST00000488964 EIF5P55010 431 aaKnown RBP19.69■□□□□ 0.74
CYTH3-209ENST00000488964 USPL1Q5W0Q7 1092 aa19.69■□□□□ 0.74
CYTH3-209ENST00000488964 LAMB4A4D0S4 1761 aa19.68■□□□□ 0.74
CYTH3-209ENST00000488964 APAF1O14727 1248 aa19.68■□□□□ 0.74
CYTH3-209ENST00000488964 SRP68Q9UHB9 627 aaKnown RBP19.68■□□□□ 0.74
CYTH3-209ENST00000488964 LAS1LQ9Y4W2 734 aaKnown RBP19.68■□□□□ 0.74
CYTH3-209ENST00000488964 A1BGP04217 495 aa19.67■□□□□ 0.74
CYTH3-209ENST00000488964 EIF4A1P60842 406 aaKnown RBP19.67■□□□□ 0.74
CYTH3-209ENST00000488964 USP16Q9Y5T5 823 aa19.67■□□□□ 0.74
CYTH3-209ENST00000488964 ZNF652Q9Y2D9 606 aa19.66■□□□□ 0.74
CYTH3-209ENST00000488964 GIGYF1O75420 1035 aaPredicted RBP19.65■□□□□ 0.74
CYTH3-209ENST00000488964 FKBP8Q14318 412 aa19.65■□□□□ 0.74
CYTH3-209ENST00000488964 GPR162Q16538 588 aa19.65■□□□□ 0.74
CYTH3-209ENST00000488964 TRIM35Q9UPQ4 493 aa19.65■□□□□ 0.74
CYTH3-209ENST00000488964 CCDC184Q52MB2 194 aa19.64■□□□□ 0.73
CYTH3-209ENST00000488964 DZIP3Q86Y13 1208 aaKnown RBP19.64■□□□□ 0.73
CYTH3-209ENST00000488964 PELP1Q8IZL8 1130 aaKnown RBP19.64■□□□□ 0.73
CYTH3-209ENST00000488964 ERBB4Q15303 1308 aa19.64■□□□□ 0.73
CYTH3-209ENST00000488964 PRAMEF22A3QJZ6 481 aa19.62■□□□□ 0.73
CYTH3-209ENST00000488964 CHL1O00533 1208 aa19.62■□□□□ 0.73
CYTH3-209ENST00000488964 GNAI1P63096 354 aa19.62■□□□□ 0.73
CYTH3-209ENST00000488964 CFAP44Q96MT7 982 aa19.62■□□□□ 0.73
CYTH3-209ENST00000488964 TBC1D2BQ9UPU7 963 aa19.62■□□□□ 0.73
CYTH3-209ENST00000488964 RGL2O15211 777 aa19.61■□□□□ 0.73
CYTH3-209ENST00000488964 NPHP1O15259 732 aa19.61■□□□□ 0.73
CYTH3-209ENST00000488964 TGFB2P61812 414 aa19.61■□□□□ 0.73
CYTH3-209ENST00000488964 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
CYTH3-209ENST00000488964 CHMP4AQ9BY43 222 aa19.61■□□□□ 0.73
CYTH3-209ENST00000488964 IFT57Q9NWB7 429 aa19.61■□□□□ 0.73
CYTH3-209ENST00000488964 SCN7AQ01118 1682 aa19.61■□□□□ 0.73
CYTH3-209ENST00000488964 GRIN3BO60391 1043 aa19.6■□□□□ 0.73
CYTH3-209ENST00000488964 NCBP3Q53F19 620 aaKnown RBP19.6■□□□□ 0.73
CYTH3-209ENST00000488964 KIF6Q6ZMV9 814 aa19.6■□□□□ 0.73
CYTH3-209ENST00000488964 C10orf71Q711Q0 1435 aa19.59■□□□□ 0.73
CYTH3-209ENST00000488964 POLRMTO00411 1230 aaKnown RBP19.59■□□□□ 0.73
CYTH3-209ENST00000488964 NFIXQ14938 502 aa19.59■□□□□ 0.73
CYTH3-209ENST00000488964 CCDC27Q2M243 656 aa19.59■□□□□ 0.73
CYTH3-209ENST00000488964 CLEC4GQ6UXB4 293 aa19.59■□□□□ 0.73
CYTH3-209ENST00000488964 CARMIL3Q8ND23 1372 aa19.58■□□□□ 0.73
CYTH3-209ENST00000488964 HOXB7P09629 217 aa19.58■□□□□ 0.72
CYTH3-209ENST00000488964 EIF2S2P20042 333 aaKnown RBP19.58■□□□□ 0.72
CYTH3-209ENST00000488964 TM4SF1P30408 202 aa19.58■□□□□ 0.72
CYTH3-209ENST00000488964 PIP4K2AP48426 406 aaPredicted RBP19.58■□□□□ 0.72
CYTH3-209ENST00000488964 BICDL1Q6ZP65 573 aa19.58■□□□□ 0.72
CYTH3-209ENST00000488964 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.72
CYTH3-209ENST00000488964 NGEFQ8N5V2 710 aa19.58■□□□□ 0.72
CYTH3-209ENST00000488964 SETDB2Q96T68 719 aa19.58■□□□□ 0.72
CYTH3-209ENST00000488964 KIF13BQ9NQT8 1826 aa19.58■□□□□ 0.72
CYTH3-209ENST00000488964 CAMTA2O94983 1202 aa19.57■□□□□ 0.72
CYTH3-209ENST00000488964 DDR1Q08345 913 aa19.57■□□□□ 0.72
CYTH3-209ENST00000488964 NBPF26B4DH59 902 aa19.56■□□□□ 0.72
CYTH3-209ENST00000488964 SERPINB2P05120 415 aa19.56■□□□□ 0.72
CYTH3-209ENST00000488964 MYL6BP14649 208 aa19.56■□□□□ 0.72
CYTH3-209ENST00000488964 NBPF10Q6P3W6 841 aaKnown RBP19.56■□□□□ 0.72
CYTH3-209ENST00000488964 NBPF15Q8N660 670 aa19.56■□□□□ 0.72
CYTH3-209ENST00000488964 BCL2L12Q9HB09 334 aa19.56■□□□□ 0.72
CYTH3-209ENST00000488964 BCORQ6W2J9 1755 aa19.56■□□□□ 0.72
CYTH3-209ENST00000488964 MBIPQ9NS73 344 aa19.55■□□□□ 0.72
CYTH3-209ENST00000488964 HDGFL1Q5TGJ6 251 aa19.54■□□□□ 0.72
CYTH3-209ENST00000488964 TBC1D9BQ66K14 1250 aa19.54■□□□□ 0.72
CYTH3-209ENST00000488964 PDZRN3Q9UPQ7 1066 aa19.54■□□□□ 0.72
CYTH3-209ENST00000488964 ERVV-1B6SEH8 477 aa19.53■□□□□ 0.72
CYTH3-209ENST00000488964 ZNF853P0CG23 659 aa19.53■□□□□ 0.72
CYTH3-209ENST00000488964 ST5P78524 1137 aa19.53■□□□□ 0.72
CYTH3-209ENST00000488964 PXDNLA1KZ92 1463 aa19.53■□□□□ 0.72
CYTH3-209ENST00000488964 IL16Q14005 1332 aa19.52■□□□□ 0.72
CYTH3-209ENST00000488964 MAP3K15Q6ZN16 1313 aa19.52■□□□□ 0.72
CYTH3-209ENST00000488964 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
CYTH3-209ENST00000488964 CNBD1Q8NA66 436 aa19.52■□□□□ 0.72
CYTH3-209ENST00000488964 CHD4Q14839 1912 aa19.52■□□□□ 0.72
CYTH3-209ENST00000488964 AFDNP55196 1824 aaKnown RBP19.51■□□□□ 0.71
CYTH3-209ENST00000488964 CCER2I3L3R5 266 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms