RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 CRYBG1Q9Y4K1 1723 aa17.36■□□□□ 0.37
ABCB1-207ENST00000488737 BTBD11A6QL63 1104 aa17.35■□□□□ 0.37
ABCB1-207ENST00000488737 GCP02774 474 aa17.35■□□□□ 0.37
ABCB1-207ENST00000488737 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
ABCB1-207ENST00000488737 HSP90AB4PQ58FF6 505 aa17.35■□□□□ 0.37
ABCB1-207ENST00000488737 CHPF2Q9P2E5 772 aa17.35■□□□□ 0.37
ABCB1-207ENST00000488737 TRIM6-TRIM34B2RNG4 842 aa17.35■□□□□ 0.37
ABCB1-207ENST00000488737 RNMTO43148 476 aaKnown RBP17.35■□□□□ 0.37
ABCB1-207ENST00000488737 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
ABCB1-207ENST00000488737 KIF1BPQ96EK5 621 aa17.35■□□□□ 0.37
ABCB1-207ENST00000488737 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
ABCB1-207ENST00000488737 PXDNQ92626 1479 aa17.34■□□□□ 0.37
ABCB1-207ENST00000488737 RILPL2Q969X0 211 aa17.34■□□□□ 0.37
ABCB1-207ENST00000488737 DBF4Q9UBU7 674 aaPredicted RBP17.34■□□□□ 0.37
ABCB1-207ENST00000488737 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
ABCB1-207ENST00000488737 ADCY9O60503 1353 aa17.33■□□□□ 0.37
ABCB1-207ENST00000488737 RHPN1Q8TCX5 695 aa17.33■□□□□ 0.37
ABCB1-207ENST00000488737 LRRC59Q96AG4 307 aaKnown RBP17.33■□□□□ 0.37
ABCB1-207ENST00000488737 PI4KAP2A4QPH2 592 aa17.33■□□□□ 0.36
ABCB1-207ENST00000488737 SURF6O75683 361 aaKnown RBP17.33■□□□□ 0.36
ABCB1-207ENST00000488737 MTX1Q13505 466 aa17.33■□□□□ 0.36
ABCB1-207ENST00000488737 PI4KAP1Q8N8J0 262 aa17.33■□□□□ 0.36
ABCB1-207ENST00000488737 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
ABCB1-207ENST00000488737 SRGAP3O43295 1099 aa17.32■□□□□ 0.36
ABCB1-207ENST00000488737 ALDH1L1O75891 902 aa17.32■□□□□ 0.36
ABCB1-207ENST00000488737 NEK4P51957 841 aa17.32■□□□□ 0.36
ABCB1-207ENST00000488737 RBM33Q96EV2 1170 aaKnown RBP17.32■□□□□ 0.36
ABCB1-207ENST00000488737 PANK2Q9BZ23 570 aa17.32■□□□□ 0.36
ABCB1-207ENST00000488737 HDAC5Q9UQL6 1122 aa17.32■□□□□ 0.36
ABCB1-207ENST00000488737 XIRP1Q702N8 1843 aaKnown RBP17.32■□□□□ 0.36
ABCB1-207ENST00000488737 ZBTB7CA1YPR0 619 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 KCNQ3O43525 872 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 CUL4AQ13619 759 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 ANKRD24Q8TF21 1146 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 ARXQ96QS3 562 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
ABCB1-207ENST00000488737 MPRIPQ6WCQ1 1025 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 ZGPATQ8N5A5 531 aaKnown RBP17.31■□□□□ 0.36
ABCB1-207ENST00000488737 PI4K2BQ8TCG2 481 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 INTS4Q96HW7 963 aaKnown RBP17.31■□□□□ 0.36
ABCB1-207ENST00000488737 IL1RAPL2Q9NP60 686 aa17.31■□□□□ 0.36
ABCB1-207ENST00000488737 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
ABCB1-207ENST00000488737 ALS2Q96Q42 1657 aa17.3■□□□□ 0.36
ABCB1-207ENST00000488737 UNC5CLQ8IV45 518 aa17.3■□□□□ 0.36
ABCB1-207ENST00000488737 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
ABCB1-207ENST00000488737 ORAI2Q96SN7 254 aa17.3■□□□□ 0.36
ABCB1-207ENST00000488737 RGPD5Q99666 1765 aa17.3■□□□□ 0.36
ABCB1-207ENST00000488737 GIGYF1O75420 1035 aaPredicted RBP17.29■□□□□ 0.36
ABCB1-207ENST00000488737 MCTP1Q6DN14 999 aa17.29■□□□□ 0.36
ABCB1-207ENST00000488737 LMBRD1Q9NUN5 540 aa17.29■□□□□ 0.36
ABCB1-207ENST00000488737 ABCC6O95255 1503 aa17.29■□□□□ 0.36
ABCB1-207ENST00000488737 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
ABCB1-207ENST00000488737 GAS2L3Q86XJ1 694 aa17.29■□□□□ 0.36
ABCB1-207ENST00000488737 NUTM1Q86Y26 1132 aa17.29■□□□□ 0.36
ABCB1-207ENST00000488737 KSR2Q6VAB6 950 aa17.28■□□□□ 0.36
ABCB1-207ENST00000488737 CNTROBQ8N137 903 aa17.28■□□□□ 0.36
ABCB1-207ENST00000488737 PALD1Q9ULE6 856 aa17.28■□□□□ 0.36
ABCB1-207ENST00000488737 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
ABCB1-207ENST00000488737 HSPA4P34932 840 aa17.27■□□□□ 0.36
ABCB1-207ENST00000488737 PKP1Q13835 747 aa17.27■□□□□ 0.36
ABCB1-207ENST00000488737 HYPKQ9NX55 129 aa17.27■□□□□ 0.36
ABCB1-207ENST00000488737 ZDHHC9Q9Y397 364 aa17.27■□□□□ 0.36
ABCB1-207ENST00000488737 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.36
ABCB1-207ENST00000488737 C1orf167Q5SNV9 1468 aa17.27■□□□□ 0.36
ABCB1-207ENST00000488737 ZNF445P59923 1031 aa17.27■□□□□ 0.35
ABCB1-207ENST00000488737 KRT28Q7Z3Y7 464 aa17.27■□□□□ 0.35
ABCB1-207ENST00000488737 RAD50Q92878 1312 aa17.26■□□□□ 0.35
ABCB1-207ENST00000488737 SGSM2O43147 1006 aa17.26■□□□□ 0.35
ABCB1-207ENST00000488737 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
ABCB1-207ENST00000488737 ERC1Q8IUD2 1116 aa17.26■□□□□ 0.35
ABCB1-207ENST00000488737 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
ABCB1-207ENST00000488737 ZNF335Q9H4Z2 1342 aaPredicted RBP17.25■□□□□ 0.35
ABCB1-207ENST00000488737 GLRX3O76003 335 aaKnown RBP17.25■□□□□ 0.35
ABCB1-207ENST00000488737 RRAGDQ9NQL2 400 aaPredicted RBP17.25■□□□□ 0.35
ABCB1-207ENST00000488737 ANXA1P04083 346 aa17.24■□□□□ 0.35
ABCB1-207ENST00000488737 UTYO14607 1347 aa17.24■□□□□ 0.35
ABCB1-207ENST00000488737 ERBB3P21860 1342 aa17.24■□□□□ 0.35
ABCB1-207ENST00000488737 BRD1O95696 1058 aa17.24■□□□□ 0.35
ABCB1-207ENST00000488737 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
ABCB1-207ENST00000488737 XPCQ01831 940 aaPredicted RBP17.24■□□□□ 0.35
ABCB1-207ENST00000488737 C9orf78Q9NZ63 289 aaPredicted RBP17.24■□□□□ 0.35
ABCB1-207ENST00000488737 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
ABCB1-207ENST00000488737 LINS1Q8NG48 757 aa17.23■□□□□ 0.35
ABCB1-207ENST00000488737 DDX21Q9NR30 783 aaKnown RBP eCLIP17.23■□□□□ 0.35
ABCB1-207ENST00000488737 AXIN2Q9Y2T1 843 aa17.23■□□□□ 0.35
ABCB1-207ENST00000488737 OS9Q13438 667 aaPredicted RBP17.22■□□□□ 0.35
ABCB1-207ENST00000488737 GPATCH3Q96I76 525 aa17.22■□□□□ 0.35
ABCB1-207ENST00000488737 C5P01031 1676 aa17.22■□□□□ 0.35
ABCB1-207ENST00000488737 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
ABCB1-207ENST00000488737 PROSER3Q2NL68 480 aa17.22■□□□□ 0.35
ABCB1-207ENST00000488737 LMOD2Q6P5Q4 547 aa17.22■□□□□ 0.35
ABCB1-207ENST00000488737 LSG1Q9H089 658 aaKnown RBP17.22■□□□□ 0.35
ABCB1-207ENST00000488737 IL25Q9H293 177 aa17.22■□□□□ 0.35
ABCB1-207ENST00000488737 C19orf44Q9H6X5 657 aa17.22■□□□□ 0.35
ABCB1-207ENST00000488737 COL18A1P39060 1754 aa17.21■□□□□ 0.35
ABCB1-207ENST00000488737 GRM8O00222 908 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 ZSCAN23Q3MJ62 389 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 KIAA1211Q6ZU35 1233 aa17.2■□□□□ 0.34
ABCB1-207ENST00000488737 RUFY2Q8WXA3 655 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms