RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 PNMA6EA0A0J9YXQ4 647 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 SMARCA5O60264 1052 aaPredicted RBP8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 NBPF7P0C2Y1 421 aaPredicted RBP8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 POLA2Q14181 598 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 OTUD7AQ8TE49 926 aaPredicted RBP8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 FMNL2Q96PY5 1086 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 OSBPL3Q9H4L5 887 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 MAP3K2Q9Y2U5 619 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 USP16Q9Y5T5 823 aa8.37□□□□□ -1.07
RN7SL561P-201ENST00000488553 IBTKQ9P2D0 1353 aaPredicted RBP8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 DDX58O95786 925 aaKnown RBP8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 TTC22Q5TAA0 569 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 LRP10Q7Z4F1 713 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 TTC5Q8N0Z6 440 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 LINS1Q8NG48 757 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 C22orf23Q9BZE7 217 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 STRN4Q9NRL3 753 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 HDAC5Q9UQL6 1122 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 PKD1L3Q7Z443 1732 aa8.36□□□□□ -1.07
RN7SL561P-201ENST00000488553 UTYO14607 1347 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 SALL3Q9BXA9 1300 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 RAB11FIP3O75154 756 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 GSPT1P15170 499 aaKnown RBP8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 SLC4A3P48751 1232 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 MTX1Q13505 466 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 TBC1D9Q6ZT07 1266 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 PPP1R42Q7Z4L9 355 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 DDX54Q8TDD1 881 aaKnown RBP8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 LRRCC1Q9C099 1032 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 BTG4Q9NY30 223 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 STAP2Q9UGK3 403 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 CACNA1FO60840 1977 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 SCN11AQ9UI33 1791 aa8.35□□□□□ -1.07
RN7SL561P-201ENST00000488553 LTBP4Q8N2S1 1624 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 APBB1O00213 710 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 EIF5BO60841 1220 aaKnown RBP8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 CDC45O75419 566 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 IGKV5-2P06315 115 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 RBM25P49756 843 aaKnown RBP8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 PDE1AP54750 535 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 MFAP1P55081 439 aaKnown RBP8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 ANKRD13DQ6ZTN6 518 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 COPS6Q7L5N1 327 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 XAGE3Q8WTP9 111 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 METTL22Q9BUU2 404 aaPredicted RBP8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 EXOC6BQ9Y2D4 811 aa8.34□□□□□ -1.07
RN7SL561P-201ENST00000488553 ERBB4Q15303 1308 aa8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 SRGAP3O43295 1099 aa8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 MYL6BP14649 208 aa8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 SDSP20132 328 aa8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 AIMP1Q12904 312 aaKnown RBP8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 CWF19L2Q2TBE0 894 aaKnown RBP8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 KAZALD1Q96I82 304 aa8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 ABCA3Q99758 1704 aa8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 C9orf78Q9NZ63 289 aaPredicted RBP8.33□□□□□ -1.08
RN7SL561P-201ENST00000488553 AHDC1Q5TGY3 1603 aaPredicted RBP8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 VIRMAQ69YN4 1812 aaKnown RBP8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 NBPF26B4DH59 902 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 GRM8O00222 908 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 SURF6O75683 361 aaKnown RBP8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 GCKRQ14397 625 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 BECN1Q14457 450 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 HSP90AB4PQ58FF6 505 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 NBPF14Q5TI25 921 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 NBPF10Q6P3W6 841 aaKnown RBP8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 NBPF15Q8N660 670 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 RHPN1Q8TCX5 695 aa8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 N4BP2Q86UW6 1770 aaPredicted RBP8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 PARP4Q9UKK3 1724 aaKnown RBP8.32□□□□□ -1.08
RN7SL561P-201ENST00000488553 AOX1Q06278 1338 aa8.31□□□□□ -1.08
RN7SL561P-201ENST00000488553 DISP2A7MBM2 1401 aa8.31□□□□□ -1.08
RN7SL561P-201ENST00000488553 NEURL1BA8MQ27 555 aa8.31□□□□□ -1.08
RN7SL561P-201ENST00000488553 NEXNQ0ZGT2 675 aa8.31□□□□□ -1.08
RN7SL561P-201ENST00000488553 PLBD2Q8NHP8 589 aa8.31□□□□□ -1.08
RN7SL561P-201ENST00000488553 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
RN7SL561P-201ENST00000488553 TNS2Q63HR2 1409 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 COL22A1Q8NFW1 1626 aaPredicted RBP8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 EXOC5O00471 708 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 A1BGP04217 495 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 MX1P20591 662 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 VSIG10Q8N0Z9 540 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 PIGBQ92521 554 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 KIF1BPQ96EK5 621 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 SUCLG2Q96I99 432 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 KIF2CQ99661 725 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 MYD88Q99836 296 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 USP26Q9BXU7 913 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 USP35Q9P2H5 1018 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 ROBO1Q9Y6N7 1651 aa8.3□□□□□ -1.08
RN7SL561P-201ENST00000488553 PTCD1O75127 700 aaKnown RBP8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 PIP4K2AP48426 406 aaPredicted RBP8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 CASC1Q6TDU7 716 aa8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 SNX21Q969T3 373 aa8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 CDCA7Q9BWT1 371 aaPredicted RBP8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 TEX13AQ9BXU3 409 aaPredicted RBP8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 BICC1Q9H694 974 aaKnown RBP8.29□□□□□ -1.08
RN7SL561P-201ENST00000488553 ATG3Q9NT62 314 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms