RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ADGRL3Q9HAR2 1447 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 RTL1A6NKG5 1358 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 F6X3S4 739 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 LETM1O95202 739 aaPredicted RBP17.2■□□□□ 0.34
RER1-207ENST00000488353 CBX1P83916 185 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 G2E3Q7L622 706 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 CRB1P82279 1406 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 PHF14O94880 888 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 UVSSAQ2YD98 709 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 FAM184AQ8NB25 1140 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 ORAI2Q96SN7 254 aa17.2■□□□□ 0.34
RER1-207ENST00000488353 REC8O95072 547 aa17.19■□□□□ 0.34
RER1-207ENST00000488353 HAP1P54257 671 aaPredicted RBP17.19■□□□□ 0.34
RER1-207ENST00000488353 FGD1P98174 961 aa17.18■□□□□ 0.34
RER1-207ENST00000488353 PPP4R3BQ5MIZ7 849 aa17.18■□□□□ 0.34
RER1-207ENST00000488353 CHAMP1Q96JM3 812 aa17.18■□□□□ 0.34
RER1-207ENST00000488353 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
RER1-207ENST00000488353 PTPRCP08575 1304 aa17.17■□□□□ 0.34
RER1-207ENST00000488353 TSC1Q92574 1164 aa17.17■□□□□ 0.34
RER1-207ENST00000488353 JARID2Q92833 1246 aaPredicted RBP17.17■□□□□ 0.34
RER1-207ENST00000488353 BRD1O95696 1058 aa17.16■□□□□ 0.34
RER1-207ENST00000488353 KIAA0232Q92628 1395 aa17.16■□□□□ 0.34
RER1-207ENST00000488353 FKBP5Q13451 457 aaPredicted RBP17.15■□□□□ 0.34
RER1-207ENST00000488353 LMOD2Q6P5Q4 547 aa17.15■□□□□ 0.34
RER1-207ENST00000488353 NECTIN2Q92692 538 aa17.15■□□□□ 0.34
RER1-207ENST00000488353 SPTLC3Q9NUV7 552 aa17.15■□□□□ 0.34
RER1-207ENST00000488353 NWD1Q149M9 1564 aa17.15■□□□□ 0.34
RER1-207ENST00000488353 MCM2P49736 904 aa17.15■□□□□ 0.34
RER1-207ENST00000488353 ATP2B3Q16720 1220 aa17.15■□□□□ 0.34
RER1-207ENST00000488353 FOXD4L5Q5VV16 416 aaPredicted RBP17.15■□□□□ 0.34
RER1-207ENST00000488353 TSHZ3Q63HK5 1081 aa17.15■□□□□ 0.34
RER1-207ENST00000488353 FOXD4L4Q8WXT5 416 aaPredicted RBP17.15■□□□□ 0.34
RER1-207ENST00000488353 ZNF830Q96NB3 372 aaPredicted RBP17.14■□□□□ 0.33
RER1-207ENST00000488353 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
RER1-207ENST00000488353 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
RER1-207ENST00000488353 LTN1O94822 1766 aa17.13■□□□□ 0.33
RER1-207ENST00000488353 GNAT3A8MTJ3 354 aa17.13■□□□□ 0.33
RER1-207ENST00000488353 PROSER2Q86WR7 435 aaPredicted RBP17.13■□□□□ 0.33
RER1-207ENST00000488353 BCL2L12Q9HB09 334 aa17.13■□□□□ 0.33
RER1-207ENST00000488353 ERC2O15083 957 aa17.12■□□□□ 0.33
RER1-207ENST00000488353 HMMRO75330 724 aa17.12■□□□□ 0.33
RER1-207ENST00000488353 PDCL2Q8N4E4 241 aa17.12■□□□□ 0.33
RER1-207ENST00000488353 USP54Q70EL1 1684 aa17.12■□□□□ 0.33
RER1-207ENST00000488353 IP6K1Q92551 441 aa17.12■□□□□ 0.33
RER1-207ENST00000488353 USP25Q9UHP3 1055 aa17.12■□□□□ 0.33
RER1-207ENST00000488353 NEK4P51957 841 aa17.11■□□□□ 0.33
RER1-207ENST00000488353 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
RER1-207ENST00000488353 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
RER1-207ENST00000488353 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
RER1-207ENST00000488353 DIAPH3Q9NSV4 1193 aa17.11■□□□□ 0.33
RER1-207ENST00000488353 ADCY5O95622 1261 aa17.11■□□□□ 0.33
RER1-207ENST00000488353 PDE1AP54750 535 aa17.11■□□□□ 0.33
RER1-207ENST00000488353 IL17REQ8NFR9 667 aa17.11■□□□□ 0.33
RER1-207ENST00000488353 INTS4Q96HW7 963 aaKnown RBP17.11■□□□□ 0.33
RER1-207ENST00000488353 NFAT5O94916 1531 aa17.1■□□□□ 0.33
RER1-207ENST00000488353 CUL4AQ13619 759 aa17.1■□□□□ 0.33
RER1-207ENST00000488353 MPNDQ8N594 471 aa17.1■□□□□ 0.33
RER1-207ENST00000488353 LRRC59Q96AG4 307 aaKnown RBP17.1■□□□□ 0.33
RER1-207ENST00000488353 CHAF1AQ13111 956 aaPredicted RBP17.1■□□□□ 0.33
RER1-207ENST00000488353 CCT4P50991 539 aaKnown RBP17.09■□□□□ 0.33
RER1-207ENST00000488353 GNAI2P04899 355 aa17.09■□□□□ 0.33
RER1-207ENST00000488353 TAF3Q5VWG9 929 aa17.09■□□□□ 0.33
RER1-207ENST00000488353 STK31Q9BXU1 1019 aa17.09■□□□□ 0.33
RER1-207ENST00000488353 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
RER1-207ENST00000488353 FAM177BA6PVY3 158 aa17.08■□□□□ 0.33
RER1-207ENST00000488353 GCP02774 474 aa17.08■□□□□ 0.32
RER1-207ENST00000488353 C17orf53Q8N3J3 647 aaPredicted RBP17.08■□□□□ 0.32
RER1-207ENST00000488353 KCNH5Q8NCM2 988 aa17.08■□□□□ 0.32
RER1-207ENST00000488353 PNMA6EA0A0J9YXQ4 647 aa17.07■□□□□ 0.32
RER1-207ENST00000488353 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
RER1-207ENST00000488353 HTATSF1O43719 755 aaKnown RBP17.07■□□□□ 0.32
RER1-207ENST00000488353 GADD45BO75293 160 aaPredicted RBP17.07■□□□□ 0.32
RER1-207ENST00000488353 ANKRD7Q92527 254 aa17.07■□□□□ 0.32
RER1-207ENST00000488353 FEZ1Q99689 392 aa17.07■□□□□ 0.32
RER1-207ENST00000488353 CCDC183Q5T5S1 534 aa17.06■□□□□ 0.32
RER1-207ENST00000488353 USP48Q86UV5 1035 aa17.06■□□□□ 0.32
RER1-207ENST00000488353 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
RER1-207ENST00000488353 KDM4AO75164 1064 aa17.06■□□□□ 0.32
RER1-207ENST00000488353 TPM3P06753 285 aa17.06■□□□□ 0.32
RER1-207ENST00000488353 FLIIQ13045 1269 aa17.06■□□□□ 0.32
RER1-207ENST00000488353 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
RER1-207ENST00000488353 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
RER1-207ENST00000488353 KRT28Q7Z3Y7 464 aa17.05■□□□□ 0.32
RER1-207ENST00000488353 KIAA1524Q8TCG1 905 aa17.05■□□□□ 0.32
RER1-207ENST00000488353 DDX17Q92841 729 aaKnown RBP17.05■□□□□ 0.32
RER1-207ENST00000488353 OSBPL3Q9H4L5 887 aa17.05■□□□□ 0.32
RER1-207ENST00000488353 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
RER1-207ENST00000488353 WDR33Q9C0J8 1336 aaKnown RBP17.04■□□□□ 0.32
RER1-207ENST00000488353 RIOK3O14730 519 aaKnown RBP17.04■□□□□ 0.32
RER1-207ENST00000488353 CTIFO43310 598 aaKnown RBP17.04■□□□□ 0.32
RER1-207ENST00000488353 MX1P20591 662 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
RER1-207ENST00000488353 KLHL34Q8N239 644 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 GDPD2Q9HCC8 539 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 RGPD2P0DJD1 1756 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
RER1-207ENST00000488353 MCCP23508 829 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 ARHGEF25Q86VW2 580 aa17.04■□□□□ 0.32
RER1-207ENST00000488353 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms