RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 SMC6Q96SB8 1091 aa20.33■□□□□ 0.84
TRAK1-209ENST00000487159 MACROD2A1Z1Q3 448 aa20.32■□□□□ 0.84
TRAK1-209ENST00000487159 SKILP12757 684 aa20.32■□□□□ 0.84
TRAK1-209ENST00000487159 CCDC30Q5VVM6 783 aa20.32■□□□□ 0.84
TRAK1-209ENST00000487159 A0A1W2PRG0 241 aa20.32■□□□□ 0.84
TRAK1-209ENST00000487159 TUBB4AP04350 444 aa20.32■□□□□ 0.84
TRAK1-209ENST00000487159 PTPRGP23470 1445 aa20.32■□□□□ 0.84
TRAK1-209ENST00000487159 BAG4O95429 457 aaKnown RBP20.32■□□□□ 0.84
TRAK1-209ENST00000487159 RFC1P35251 1148 aaPredicted RBP20.32■□□□□ 0.84
TRAK1-209ENST00000487159 FERP16591 822 aa20.32■□□□□ 0.84
TRAK1-209ENST00000487159 RBM27Q9P2N5 1060 aaKnown RBP20.32■□□□□ 0.84
TRAK1-209ENST00000487159 LMNTD2Q8IXW0 634 aa20.31■□□□□ 0.84
TRAK1-209ENST00000487159 LACTBP83111 547 aaPredicted RBP20.31■□□□□ 0.84
TRAK1-209ENST00000487159 CCDC96Q2M329 555 aa20.31■□□□□ 0.84
TRAK1-209ENST00000487159 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.31■□□□□ 0.841e-6■■■■■ 31.9
TRAK1-209ENST00000487159 CWC27Q6UX04 472 aaKnown RBP20.31■□□□□ 0.84
TRAK1-209ENST00000487159 HCLS1P14317 486 aaPredicted RBP20.31■□□□□ 0.84
TRAK1-209ENST00000487159 MAP2K2P36507 400 aa20.31■□□□□ 0.84
TRAK1-209ENST00000487159 GOLGA1Q92805 767 aa20.31■□□□□ 0.84
TRAK1-209ENST00000487159 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
TRAK1-209ENST00000487159 PPP1R14CQ8TAE6 165 aa20.3■□□□□ 0.84
TRAK1-209ENST00000487159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.3■□□□□ 0.84
TRAK1-209ENST00000487159 ZEB2O60315 1214 aa20.3■□□□□ 0.84
TRAK1-209ENST00000487159 HS1BP3Q53T59 392 aa20.3■□□□□ 0.84
TRAK1-209ENST00000487159 CPLX4Q7Z7G2 160 aa20.3■□□□□ 0.84
TRAK1-209ENST00000487159 TTC14Q96N46 770 aa20.3■□□□□ 0.84
TRAK1-209ENST00000487159 NACAP1Q9BZK3 213 aa20.3■□□□□ 0.84
TRAK1-209ENST00000487159 ATF7IPQ6VMQ6 1270 aa20.3■□□□□ 0.84
TRAK1-209ENST00000487159 WDR63Q8IWG1 891 aa20.29■□□□□ 0.84
TRAK1-209ENST00000487159 UACAQ9BZF9 1416 aa20.29■□□□□ 0.84
TRAK1-209ENST00000487159 PHACTR2O75167 634 aa20.29■□□□□ 0.84
TRAK1-209ENST00000487159 CCDC158Q5M9N0 1113 aa20.29■□□□□ 0.84
TRAK1-209ENST00000487159 PRPF4BQ13523 1007 aaKnown RBP20.29■□□□□ 0.84
TRAK1-209ENST00000487159 CCDC186Q7Z3E2 898 aa20.29■□□□□ 0.84
TRAK1-209ENST00000487159 ARFGAP2Q8N6H7 521 aa20.28■□□□□ 0.84
TRAK1-209ENST00000487159 MYCBPQ99417 103 aaPredicted RBP20.28■□□□□ 0.84
TRAK1-209ENST00000487159 TSG101Q99816 390 aa20.28■□□□□ 0.84
TRAK1-209ENST00000487159 WASHC2AQ641Q2 1341 aa20.28■□□□□ 0.84
TRAK1-209ENST00000487159 GABPB1Q06547 395 aaPredicted RBP20.28■□□□□ 0.84
TRAK1-209ENST00000487159 GDPD2Q9HCC8 539 aa20.28■□□□□ 0.84
TRAK1-209ENST00000487159 SH2B1Q9NRF2 756 aaPredicted RBP20.28■□□□□ 0.84
TRAK1-209ENST00000487159 PCK1P35558 622 aa20.28■□□□□ 0.84
TRAK1-209ENST00000487159 FMNL3Q8IVF7 1028 aa20.28■□□□□ 0.84
TRAK1-209ENST00000487159 CEP120Q8N960 986 aa20.28■□□□□ 0.84
TRAK1-209ENST00000487159 FGFR1OPO95684 399 aaKnown RBP20.28■□□□□ 0.84
TRAK1-209ENST00000487159 SYTL4Q96C24 671 aaPredicted RBP20.28■□□□□ 0.84
TRAK1-209ENST00000487159 DNAJC21Q5F1R6 531 aaKnown RBP20.27■□□□□ 0.84
TRAK1-209ENST00000487159 TTC39AQ5SRH9 613 aa20.27■□□□□ 0.84
TRAK1-209ENST00000487159 CTNNA3Q9UI47 895 aa20.27■□□□□ 0.84
TRAK1-209ENST00000487159 GTF3C6Q969F1 213 aa20.27■□□□□ 0.84
TRAK1-209ENST00000487159 MROH2BQ7Z745 1585 aa20.27■□□□□ 0.84
TRAK1-209ENST00000487159 POTEDQ86YR6 584 aa20.27■□□□□ 0.84
TRAK1-209ENST00000487159 ZBTB16Q05516 673 aa20.27■□□□□ 0.83
TRAK1-209ENST00000487159 FSIP1Q8NA03 581 aa20.27■□□□□ 0.83
TRAK1-209ENST00000487159 STMN4Q9H169 189 aaPredicted RBP20.27■□□□□ 0.83
TRAK1-209ENST00000487159 FAM114A2Q9NRY5 505 aa20.27■□□□□ 0.83
TRAK1-209ENST00000487159 CCDC129Q6ZRS4 1044 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 RPUSD2Q8IZ73 545 aaKnown RBP20.26■□□□□ 0.83
TRAK1-209ENST00000487159 TUBB4BP68371 445 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 KIAA0753Q2KHM9 967 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 CNNM3Q8NE01 707 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 TCHPQ9BT92 498 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
TRAK1-209ENST00000487159 FAM76AQ8TAV0 307 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 IKBKGQ9Y6K9 419 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 DDX12PQ92771 950 aa20.26■□□□□ 0.83
TRAK1-209ENST00000487159 UBE2HP62256 183 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 B4GALNT4Q76KP1 1039 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 TTC12Q9H892 705 aaPredicted RBP20.25■□□□□ 0.83
TRAK1-209ENST00000487159 BIN1O00499 593 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 NBPF8Q3BBV2 869 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 LRCH2Q5VUJ6 765 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 MINK1Q8N4C8 1332 aaPredicted RBP20.25■□□□□ 0.83
TRAK1-209ENST00000487159 CTNNA2P26232 953 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 PPP1R12CQ9BZL4 782 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 ANAPC4Q9UJX5 808 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 NOP2P46087 812 aaKnown RBP20.25■□□□□ 0.83
TRAK1-209ENST00000487159 SIL1Q9H173 461 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
TRAK1-209ENST00000487159 TACC1O75410 805 aa20.24■□□□□ 0.83
TRAK1-209ENST00000487159 INPP5BP32019 993 aa20.24■□□□□ 0.83
TRAK1-209ENST00000487159 ABCC8Q09428 1581 aa20.24■□□□□ 0.83
TRAK1-209ENST00000487159 AP1ARQ63HQ0 302 aa20.24■□□□□ 0.83
TRAK1-209ENST00000487159 SAMD15Q9P1V8 674 aa20.24■□□□□ 0.83
TRAK1-209ENST00000487159 CWC25Q9NXE8 425 aaPredicted RBP20.24■□□□□ 0.83
TRAK1-209ENST00000487159 BUB1BO60566 1050 aaPredicted RBP20.24■□□□□ 0.83
TRAK1-209ENST00000487159 PIP4K2BP78356 416 aa20.24■□□□□ 0.83
TRAK1-209ENST00000487159 APBB1IPQ7Z5R6 666 aaPredicted RBP20.24■□□□□ 0.83
TRAK1-209ENST00000487159 TSR2Q969E8 191 aaKnown RBP20.23■□□□□ 0.83
TRAK1-209ENST00000487159 CCDC50Q8IVM0 306 aa20.23■□□□□ 0.83
TRAK1-209ENST00000487159 UBAC1Q9BSL1 405 aa20.23■□□□□ 0.83
TRAK1-209ENST00000487159 CACNA2D3Q8IZS8 1091 aa20.23■□□□□ 0.83
TRAK1-209ENST00000487159 ATP11AP98196 1134 aa20.22■□□□□ 0.83
TRAK1-209ENST00000487159 SELENOSQ9BQE4 189 aa20.22■□□□□ 0.83
TRAK1-209ENST00000487159 IQCGQ9H095 443 aaKnown RBP20.22■□□□□ 0.83
TRAK1-209ENST00000487159 SETDB1Q15047 1291 aa20.22■□□□□ 0.83
TRAK1-209ENST00000487159 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.836e-7■■■■□ 22.4
TRAK1-209ENST00000487159 MTIF2P46199 727 aaKnown RBP20.22■□□□□ 0.83
TRAK1-209ENST00000487159 ZWINTO95229 277 aa20.22■□□□□ 0.83
TRAK1-209ENST00000487159 TUBBP07437 444 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms