RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 NUTM2BA6NNL0 878 aaPredicted RBP8.9□□□□□ -0.98
SF3A3-206ENST00000487062 NUTM2EB1AL46 878 aaPredicted RBP8.9□□□□□ -0.98
SF3A3-206ENST00000487062 ERVV-2B6SEH9 535 aa8.9□□□□□ -0.98
SF3A3-206ENST00000487062 ADAMTS2O95450 1211 aa8.9□□□□□ -0.98
SF3A3-206ENST00000487062 INTS3Q68E01 1043 aaKnown RBP8.9□□□□□ -0.98
SF3A3-206ENST00000487062 NUTM2AQ8IVF1 878 aaPredicted RBP8.9□□□□□ -0.98
SF3A3-206ENST00000487062 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.98
SF3A3-206ENST00000487062 CDCA7Q9BWT1 371 aaPredicted RBP8.9□□□□□ -0.98
SF3A3-206ENST00000487062 ZBTB40Q9NUA8 1239 aa8.9□□□□□ -0.98
SF3A3-206ENST00000487062 LAMB4A4D0S4 1761 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 HEG1Q9ULI3 1381 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 KCNQ3O43525 872 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 GTPBP6O43824 516 aaPredicted RBP8.89□□□□□ -0.99
SF3A3-206ENST00000487062 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
SF3A3-206ENST00000487062 EIF2S2P20042 333 aaKnown RBP8.89□□□□□ -0.99
SF3A3-206ENST00000487062 CCT4P50991 539 aaKnown RBP8.89□□□□□ -0.99
SF3A3-206ENST00000487062 FLIIQ13045 1269 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 ZNF790Q6PG37 636 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 NECTIN2Q92692 538 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 USP35Q9P2H5 1018 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 THRAP3Q9Y2W1 955 aaKnown RBP8.89□□□□□ -0.99
SF3A3-206ENST00000487062 PCDHB15Q9Y5E8 787 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 PXDNLA1KZ92 1463 aa8.89□□□□□ -0.99
SF3A3-206ENST00000487062 DISP2A7MBM2 1401 aa8.88□□□□□ -0.99
SF3A3-206ENST00000487062 RGS12O14924 1447 aa8.88□□□□□ -0.99
SF3A3-206ENST00000487062 C5P01031 1676 aa8.88□□□□□ -0.99
SF3A3-206ENST00000487062 PAPPAQ13219 1627 aa8.88□□□□□ -0.99
SF3A3-206ENST00000487062 ZBTB7BO15156 539 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-206ENST00000487062 FKBP5Q13451 457 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-206ENST00000487062 DDX54Q8TDD1 881 aaKnown RBP8.88□□□□□ -0.99
SF3A3-206ENST00000487062 FMNL2Q96PY5 1086 aa8.88□□□□□ -0.99
SF3A3-206ENST00000487062 DBF4Q9UBU7 674 aaPredicted RBP8.88□□□□□ -0.99
SF3A3-206ENST00000487062 UBR2Q8IWV8 1755 aa8.88□□□□□ -0.99
SF3A3-206ENST00000487062 LRP6O75581 1613 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 ITGB4P16144 1822 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 SPATA31A6Q5VVP1 1343 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 SLIT2O94813 1529 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 EXOC5O00471 708 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 IGHDP01880 384 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 HDAC1Q13547 482 aaPredicted RBP8.87□□□□□ -0.99
SF3A3-206ENST00000487062 G2E3Q7L622 706 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 HYPKQ9NX55 129 aa8.87□□□□□ -0.99
SF3A3-206ENST00000487062 SPATA31A1Q5TZJ5 1347 aa8.86□□□□□ -0.99
SF3A3-206ENST00000487062 TOGARAM1Q9Y4F4 1720 aa8.86□□□□□ -0.99
SF3A3-206ENST00000487062 SNRPA1P09661 255 aaKnown RBP8.86□□□□□ -0.99
SF3A3-206ENST00000487062 SLC39A6Q13433 755 aa8.86□□□□□ -0.99
SF3A3-206ENST00000487062 SLC4A10Q6U841 1118 aa8.86□□□□□ -0.99
SF3A3-206ENST00000487062 CHPF2Q9P2E5 772 aa8.86□□□□□ -0.99
SF3A3-206ENST00000487062 TNS2Q63HR2 1409 aa8.86□□□□□ -0.99
SF3A3-206ENST00000487062 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
SF3A3-206ENST00000487062 DDX58O95786 925 aaKnown RBP8.85□□□□□ -0.99
SF3A3-206ENST00000487062 GNAI3P08754 354 aa8.85□□□□□ -0.99
SF3A3-206ENST00000487062 ZNF496Q96IT1 587 aaPredicted RBP8.85□□□□□ -0.99
SF3A3-206ENST00000487062 NGLY1Q96IV0 654 aa8.85□□□□□ -0.99
SF3A3-206ENST00000487062 DDX21Q9NR30 783 aaKnown RBP eCLIP8.85□□□□□ -0.99
SF3A3-206ENST00000487062 TMOD3Q9NYL9 352 aa8.85□□□□□ -0.99
SF3A3-206ENST00000487062 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
SF3A3-206ENST00000487062 SPATA31A5Q5VU36 1347 aa8.84□□□□□ -0.99
SF3A3-206ENST00000487062 SPATA31A7Q8IWB4 1347 aa8.84□□□□□ -0.99
SF3A3-206ENST00000487062 F6X3S4 739 aa8.84□□□□□ -0.99
SF3A3-206ENST00000487062 DDB1Q16531 1140 aa8.84□□□□□ -0.99
SF3A3-206ENST00000487062 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
SF3A3-206ENST00000487062 UNC5CLQ8IV45 518 aa8.84□□□□□ -0.99
SF3A3-206ENST00000487062 RPAP2Q8IXW5 612 aaPredicted RBP8.84□□□□□ -0.99
SF3A3-206ENST00000487062 GCC1Q96CN9 775 aa8.84□□□□□ -0.99
SF3A3-206ENST00000487062 PHAXQ9H814 394 aaKnown RBP8.84□□□□□ -0.99
SF3A3-206ENST00000487062 ERBB4Q15303 1308 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 DOT1LQ8TEK3 1739 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 SMC5Q8IY18 1101 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 DNAAF4Q8WXU2 420 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 C8orf37Q96NL8 207 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 SRCIN1Q9C0H9 1055 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 HDAC5Q9UQL6 1122 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 KAT6BQ8WYB5 2073 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 KCPQ6ZWJ8 1503 aa8.83□□□□□ -1
SF3A3-206ENST00000487062 GLI3P10071 1580 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 ATP10DQ9P241 1426 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 PRAMEF22A3QJZ6 481 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 PI4KAP2A4QPH2 592 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 HMMRO75330 724 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 ALDH1L1O75891 902 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 GNAI2P04899 355 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 RGS3P49796 1198 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 VPS72Q15906 364 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 KSR2Q6VAB6 950 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 ANKRD44Q8N8A2 993 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 PI4KAP1Q8N8J0 262 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 MEIS3Q99687 375 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 TEX13AQ9BXU3 409 aaPredicted RBP8.82□□□□□ -1
SF3A3-206ENST00000487062 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 PDZRN3Q9UPQ7 1066 aa8.82□□□□□ -1
SF3A3-206ENST00000487062 ANXA1P04083 346 aa8.81□□□□□ -1
SF3A3-206ENST00000487062 GSE1Q14687 1217 aa8.81□□□□□ -1
SF3A3-206ENST00000487062 MEX3CQ5U5Q3 659 aaKnown RBP8.81□□□□□ -1
SF3A3-206ENST00000487062 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
SF3A3-206ENST00000487062 USP16Q9Y5T5 823 aa8.81□□□□□ -1
SF3A3-206ENST00000487062 BCL9O00512 1426 aa8.8□□□□□ -1
SF3A3-206ENST00000487062 AFDNP55196 1824 aaKnown RBP8.8□□□□□ -1
SF3A3-206ENST00000487062 RIOK3O14730 519 aaKnown RBP8.8□□□□□ -1
SF3A3-206ENST00000487062 UBTFL1P0CB47 393 aaPredicted RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms