RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 FCHSD2O94868 740 aa19.28■□□□□ 0.68
CLDN11-207ENST00000486975 IL17REQ8NFR9 667 aa19.28■□□□□ 0.68
CLDN11-207ENST00000486975 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
CLDN11-207ENST00000486975 CEMIPQ8WUJ3 1361 aa19.28■□□□□ 0.68
CLDN11-207ENST00000486975 UBR2Q8IWV8 1755 aa19.27■□□□□ 0.68
CLDN11-207ENST00000486975 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.68
CLDN11-207ENST00000486975 GYS1P13807 737 aa19.27■□□□□ 0.68
CLDN11-207ENST00000486975 RFC4P35249 363 aa19.27■□□□□ 0.68
CLDN11-207ENST00000486975 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.68
CLDN11-207ENST00000486975 SLC39A6Q13433 755 aa19.27■□□□□ 0.68
CLDN11-207ENST00000486975 INTS5Q6P9B9 1019 aaKnown RBP19.27■□□□□ 0.68
CLDN11-207ENST00000486975 C4AP0C0L4 1744 aa19.26■□□□□ 0.67
CLDN11-207ENST00000486975 MMP10P09238 476 aa19.26■□□□□ 0.67
CLDN11-207ENST00000486975 TEFQ10587 303 aa19.26■□□□□ 0.67
CLDN11-207ENST00000486975 DNAJC10Q8IXB1 793 aa19.26■□□□□ 0.67
CLDN11-207ENST00000486975 CCDC87Q9NVE4 849 aa19.26■□□□□ 0.67
CLDN11-207ENST00000486975 GRIN3BO60391 1043 aa19.25■□□□□ 0.67
CLDN11-207ENST00000486975 CYP19A1P11511 503 aaPredicted RBP19.25■□□□□ 0.67
CLDN11-207ENST00000486975 CHADLQ6NUI6 762 aa19.25■□□□□ 0.67
CLDN11-207ENST00000486975 CHD4Q14839 1912 aa19.25■□□□□ 0.67
CLDN11-207ENST00000486975 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
CLDN11-207ENST00000486975 SIPA1L3O60292 1781 aaPredicted RBP19.24■□□□□ 0.67
CLDN11-207ENST00000486975 YBX3P16989 372 aaKnown RBP eCLIP19.23■□□□□ 0.67
CLDN11-207ENST00000486975 EVX2Q03828 476 aa19.23■□□□□ 0.67
CLDN11-207ENST00000486975 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
CLDN11-207ENST00000486975 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
CLDN11-207ENST00000486975 TTC5Q8N0Z6 440 aa19.23■□□□□ 0.67
CLDN11-207ENST00000486975 SOS1Q07889 1333 aaPredicted RBP19.23■□□□□ 0.67
CLDN11-207ENST00000486975 UTRNP46939 3433 aa19.22■□□□□ 0.67
CLDN11-207ENST00000486975 C10orf71Q711Q0 1435 aa19.22■□□□□ 0.67
CLDN11-207ENST00000486975 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
CLDN11-207ENST00000486975 SPDYE4A6NLX3 237 aa19.21■□□□□ 0.67
CLDN11-207ENST00000486975 ZNF496Q96IT1 587 aaPredicted RBP19.21■□□□□ 0.67
CLDN11-207ENST00000486975 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
CLDN11-207ENST00000486975 HTATSF1O43719 755 aaKnown RBP19.2■□□□□ 0.66
CLDN11-207ENST00000486975 TEX13AQ9BXU3 409 aaPredicted RBP19.2■□□□□ 0.66
CLDN11-207ENST00000486975 STARD3NLO95772 234 aa19.19■□□□□ 0.66
CLDN11-207ENST00000486975 TGFB2P61812 414 aa19.19■□□□□ 0.66
CLDN11-207ENST00000486975 RALBP1Q15311 655 aa19.19■□□□□ 0.66
CLDN11-207ENST00000486975 ZNF784Q8NCA9 323 aaPredicted RBP19.19■□□□□ 0.66
CLDN11-207ENST00000486975 SRP68Q9UHB9 627 aaKnown RBP19.19■□□□□ 0.66
CLDN11-207ENST00000486975 ZBTB1Q9Y2K1 713 aa19.19■□□□□ 0.66
CLDN11-207ENST00000486975 PARP3Q9Y6F1 533 aa19.19■□□□□ 0.66
CLDN11-207ENST00000486975 COL15A1P39059 1388 aa19.19■□□□□ 0.66
CLDN11-207ENST00000486975 PXDNLA1KZ92 1463 aa19.18■□□□□ 0.66
CLDN11-207ENST00000486975 RTF1Q92541 710 aaKnown RBP19.18■□□□□ 0.66
CLDN11-207ENST00000486975 FKBP8Q14318 412 aa19.17■□□□□ 0.66
CLDN11-207ENST00000486975 FMNL2Q96PY5 1086 aa19.17■□□□□ 0.66
CLDN11-207ENST00000486975 NARFQ9UHQ1 456 aa19.17■□□□□ 0.66
CLDN11-207ENST00000486975 KIAA1551Q9HCM1 1747 aa19.17■□□□□ 0.66
CLDN11-207ENST00000486975 BTBD11A6QL63 1104 aa19.16■□□□□ 0.66
CLDN11-207ENST00000486975 ZPR1O75312 459 aa19.16■□□□□ 0.66
CLDN11-207ENST00000486975 NEFMP07197 916 aa19.15■□□□□ 0.66
CLDN11-207ENST00000486975 TM4SF1P30408 202 aa19.15■□□□□ 0.66
CLDN11-207ENST00000486975 DDR1Q08345 913 aa19.15■□□□□ 0.66
CLDN11-207ENST00000486975 EIF5P55010 431 aaKnown RBP19.14■□□□□ 0.65
CLDN11-207ENST00000486975 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
CLDN11-207ENST00000486975 MCM10Q7L590 875 aa19.14■□□□□ 0.65
CLDN11-207ENST00000486975 PLEKHF1Q96S99 279 aa19.14■□□□□ 0.65
CLDN11-207ENST00000486975 PNNQ9H307 717 aaKnown RBP19.14■□□□□ 0.65
CLDN11-207ENST00000486975 A0A087WZG4 1122 aa19.13■□□□□ 0.65
CLDN11-207ENST00000486975 POLRMTO00411 1230 aaKnown RBP19.13■□□□□ 0.65
CLDN11-207ENST00000486975 DDX10Q13206 875 aaKnown RBP19.13■□□□□ 0.65
CLDN11-207ENST00000486975 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
CLDN11-207ENST00000486975 IL6STP40189 918 aaPredicted RBP19.12■□□□□ 0.65
CLDN11-207ENST00000486975 GOLGB1Q14789 3259 aaKnown RBP19.12■□□□□ 0.65
CLDN11-207ENST00000486975 C19orf67A6NJJ6 358 aa19.11■□□□□ 0.65
CLDN11-207ENST00000486975 KCNQ3O43525 872 aa19.11■□□□□ 0.65
CLDN11-207ENST00000486975 BCL2L12Q9HB09 334 aa19.11■□□□□ 0.65
CLDN11-207ENST00000486975 MYBBP1AQ9BQG0 1328 aaKnown RBP19.1■□□□□ 0.65
CLDN11-207ENST00000486975 DCTN1Q14203 1278 aa19.1■□□□□ 0.65
CLDN11-207ENST00000486975 TAF7Q15545 349 aaPredicted RBP19.1■□□□□ 0.65
CLDN11-207ENST00000486975 NFE2L2Q16236 605 aa19.1■□□□□ 0.65
CLDN11-207ENST00000486975 A0A0G2JLW4 131 aa19.09■□□□□ 0.65
CLDN11-207ENST00000486975 SNRPA1P09661 255 aaKnown RBP19.09■□□□□ 0.65
CLDN11-207ENST00000486975 DPEP1P16444 411 aa19.09■□□□□ 0.65
CLDN11-207ENST00000486975 NFIXQ14938 502 aa19.09■□□□□ 0.65
CLDN11-207ENST00000486975 NRXN2Q9P2S2 1712 aa19.08■□□□□ 0.65
CLDN11-207ENST00000486975 ADCY9O60503 1353 aa19.08■□□□□ 0.65
CLDN11-207ENST00000486975 N4BP2Q86UW6 1770 aaPredicted RBP19.08■□□□□ 0.64
CLDN11-207ENST00000486975 SCN7AQ01118 1682 aa19.08■□□□□ 0.64
CLDN11-207ENST00000486975 MAPK8IP3Q9UPT6 1336 aa19.07■□□□□ 0.64
CLDN11-207ENST00000486975 KCNA3P22001 575 aa19.07■□□□□ 0.64
CLDN11-207ENST00000486975 PNISRQ8TF01 805 aaKnown RBP19.07■□□□□ 0.64
CLDN11-207ENST00000486975 BRCA1P38398 1863 aaKnown RBP19.07■□□□□ 0.64
CLDN11-207ENST00000486975 A1BGP04217 495 aa19.06■□□□□ 0.64
CLDN11-207ENST00000486975 WWC3Q9ULE0 1092 aa19.06■□□□□ 0.64
CLDN11-207ENST00000486975 USP16Q9Y5T5 823 aa19.06■□□□□ 0.64
CLDN11-207ENST00000486975 DLG5Q8TDM6 1919 aa19.06■□□□□ 0.64
CLDN11-207ENST00000486975 PIM2Q9P1W9 311 aa19.05■□□□□ 0.64
CLDN11-207ENST00000486975 BCS1LQ9Y276 419 aa19.05■□□□□ 0.64
CLDN11-207ENST00000486975 SERPINB2P05120 415 aa19.04■□□□□ 0.64
CLDN11-207ENST00000486975 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
CLDN11-207ENST00000486975 ATP10DQ9P241 1426 aa19.03■□□□□ 0.64
CLDN11-207ENST00000486975 RGL2O15211 777 aa19.03■□□□□ 0.64
CLDN11-207ENST00000486975 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
CLDN11-207ENST00000486975 KDM3BQ7LBC6 1761 aa19.03■□□□□ 0.64
CLDN11-207ENST00000486975 AFDNP55196 1824 aaKnown RBP19.02■□□□□ 0.64
CLDN11-207ENST00000486975 PRAMEF22A3QJZ6 481 aa19.02■□□□□ 0.64
CLDN11-207ENST00000486975 CAMTA2O94983 1202 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms