RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 TJP1Q07157 1748 aa25.32■■□□□ 1.64
GMDS-205ENST00000486793 U2SURPO15042 1029 aaKnown RBP25.32■■□□□ 1.64
GMDS-205ENST00000486793 TTC5Q8N0Z6 440 aa25.31■■□□□ 1.64
GMDS-205ENST00000486793 IL17REQ8NFR9 667 aa25.31■■□□□ 1.64
GMDS-205ENST00000486793 RNF181Q9P0P0 153 aa25.31■■□□□ 1.64
GMDS-205ENST00000486793 MRC1P22897 1456 aa25.31■■□□□ 1.64
GMDS-205ENST00000486793 COL15A1P39059 1388 aa25.31■■□□□ 1.64
GMDS-205ENST00000486793 STARD3NLO95772 234 aa25.3■■□□□ 1.64
GMDS-205ENST00000486793 SERPINB2P05120 415 aa25.3■■□□□ 1.64
GMDS-205ENST00000486793 APLP1P51693 650 aa25.3■■□□□ 1.64
GMDS-205ENST00000486793 IFFO2Q5TF58 517 aa25.3■■□□□ 1.64
GMDS-205ENST00000486793 SCN11AQ9UI33 1791 aa25.29■■□□□ 1.64
GMDS-205ENST00000486793 KCPQ6ZWJ8 1503 aa25.29■■□□□ 1.64
GMDS-205ENST00000486793 EIF5P55010 431 aaKnown RBP25.28■■□□□ 1.64
GMDS-205ENST00000486793 ZNF496Q96IT1 587 aaPredicted RBP25.28■■□□□ 1.64
GMDS-205ENST00000486793 GNAT3A8MTJ3 354 aa25.27■■□□□ 1.64
GMDS-205ENST00000486793 TEFQ10587 303 aa25.27■■□□□ 1.64
GMDS-205ENST00000486793 ZNF790Q6PG37 636 aa25.26■■□□□ 1.63
GMDS-205ENST00000486793 BICDL1Q6ZP65 573 aa25.26■■□□□ 1.63
GMDS-205ENST00000486793 GAS2L2Q8NHY3 880 aa25.26■■□□□ 1.63
GMDS-205ENST00000486793 NPC1L1Q9UHC9 1359 aa25.26■■□□□ 1.63
GMDS-205ENST00000486793 ADAMTS7Q9UKP4 1686 aa25.26■■□□□ 1.63
GMDS-205ENST00000486793 C16orf71Q8IYS4 520 aaPredicted RBP25.25■■□□□ 1.63
GMDS-205ENST00000486793 RBM46Q8TBY0 533 aaKnown RBP25.25■■□□□ 1.63
GMDS-205ENST00000486793 KDM2BQ8NHM5 1336 aa25.25■■□□□ 1.63
GMDS-205ENST00000486793 A0A087WZG4 1122 aa25.24■■□□□ 1.63
GMDS-205ENST00000486793 DNAJC5GQ8N7S2 189 aa25.24■■□□□ 1.63
GMDS-205ENST00000486793 TEX13AQ9BXU3 409 aaPredicted RBP25.24■■□□□ 1.63
GMDS-205ENST00000486793 RRAGCQ9HB90 399 aa25.24■■□□□ 1.63
GMDS-205ENST00000486793 C2CD5Q86YS7 1000 aa25.23■■□□□ 1.63
GMDS-205ENST00000486793 TTLL6Q8N841 843 aa25.23■■□□□ 1.63
GMDS-205ENST00000486793 RASSF7Q02833 373 aa25.22■■□□□ 1.63
GMDS-205ENST00000486793 PHACTR3Q96KR7 559 aa25.22■■□□□ 1.63
GMDS-205ENST00000486793 COL3A1P02461 1466 aaPredicted RBP25.21■■□□□ 1.63
GMDS-205ENST00000486793 HEG1Q9ULI3 1381 aa25.21■■□□□ 1.63
GMDS-205ENST00000486793 H0YIN7 160 aa25.21■■□□□ 1.63
GMDS-205ENST00000486793 TBC1D2BQ9UPU7 963 aa25.21■■□□□ 1.63
GMDS-205ENST00000486793 BRCA1P38398 1863 aaKnown RBP25.2■■□□□ 1.62
GMDS-205ENST00000486793 PRELPP51888 382 aa25.2■■□□□ 1.62
GMDS-205ENST00000486793 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
GMDS-205ENST00000486793 ZNF330Q9Y3S2 320 aaPredicted RBP25.2■■□□□ 1.62
GMDS-205ENST00000486793 A1BGP04217 495 aa25.19■■□□□ 1.62
GMDS-205ENST00000486793 LMNB1P20700 586 aa25.19■■□□□ 1.62
GMDS-205ENST00000486793 FMNL2Q96PY5 1086 aa25.19■■□□□ 1.62
GMDS-205ENST00000486793 CARMIL3Q8ND23 1372 aa25.18■■□□□ 1.62
GMDS-205ENST00000486793 KCNQ3O43525 872 aa25.18■■□□□ 1.62
GMDS-205ENST00000486793 PRKAR2BP31323 418 aa25.18■■□□□ 1.62
GMDS-205ENST00000486793 IL6STP40189 918 aaPredicted RBP25.18■■□□□ 1.62
GMDS-205ENST00000486793 FSTL1Q12841 308 aa25.18■■□□□ 1.62
GMDS-205ENST00000486793 CCDC24Q8N4L8 307 aa25.17■■□□□ 1.62
GMDS-205ENST00000486793 BTBD11A6QL63 1104 aa25.16■■□□□ 1.62
GMDS-205ENST00000486793 HTRA3P83110 453 aa25.16■■□□□ 1.62
GMDS-205ENST00000486793 CFAP53Q96M91 514 aa25.16■■□□□ 1.62
GMDS-205ENST00000486793 BRIP1Q9BX63 1249 aa25.16■■□□□ 1.62
GMDS-205ENST00000486793 RSPH6AQ9H0K4 717 aa25.16■■□□□ 1.62
GMDS-205ENST00000486793 ARFGEF1Q9Y6D6 1849 aa25.15■■□□□ 1.62
GMDS-205ENST00000486793 CEMIPQ8WUJ3 1361 aa25.15■■□□□ 1.62
GMDS-205ENST00000486793 ZC3H4Q9UPT8 1303 aaKnown RBP25.14■■□□□ 1.62
GMDS-205ENST00000486793 NFKBIEO00221 500 aa25.14■■□□□ 1.62
GMDS-205ENST00000486793 PRR5LQ6MZQ0 368 aa25.14■■□□□ 1.62
GMDS-205ENST00000486793 NPM2Q86SE8 214 aaKnown RBP25.14■■□□□ 1.62
GMDS-205ENST00000486793 ZNF622Q969S3 477 aaKnown RBP eCLIP25.14■■□□□ 1.62
GMDS-205ENST00000486793 GLTPD2A6NH11 291 aa25.13■■□□□ 1.61
GMDS-205ENST00000486793 PDE6BP35913 854 aa25.13■■□□□ 1.61
GMDS-205ENST00000486793 CAMTA2O94983 1202 aa25.12■■□□□ 1.61
GMDS-205ENST00000486793 SETDB2Q96T68 719 aa25.12■■□□□ 1.61
GMDS-205ENST00000486793 NUDCQ9Y266 331 aa25.12■■□□□ 1.61
GMDS-205ENST00000486793 USP16Q9Y5T5 823 aa25.12■■□□□ 1.61
GMDS-205ENST00000486793 U2AF1L5P0DN76 240 aaPredicted RBP25.11■■□□□ 1.61
GMDS-205ENST00000486793 U2AF1Q01081 240 aaKnown RBP eCLIP25.11■■□□□ 1.61
GMDS-205ENST00000486793 ZNF219Q9P2Y4 722 aaPredicted RBP25.11■■□□□ 1.61
GMDS-205ENST00000486793 PDZRN3Q9UPQ7 1066 aa25.11■■□□□ 1.61
GMDS-205ENST00000486793 C21orf2O43822 256 aa25.1■■□□□ 1.61
GMDS-205ENST00000486793 VEGFAP15692 232 aaPredicted RBP25.1■■□□□ 1.61
GMDS-205ENST00000486793 NRXN2Q9P2S2 1712 aa25.09■■□□□ 1.61
GMDS-205ENST00000486793 PPP2R1AP30153 589 aa25.09■■□□□ 1.61
GMDS-205ENST00000486793 PIP4K2AP48426 406 aaPredicted RBP25.09■■□□□ 1.61
GMDS-205ENST00000486793 MCM10Q7L590 875 aa25.09■■□□□ 1.61
GMDS-205ENST00000486793 DZIP3Q86Y13 1208 aaKnown RBP25.09■■□□□ 1.61
GMDS-205ENST00000486793 SMC1BQ8NDV3 1235 aa25.09■■□□□ 1.61
GMDS-205ENST00000486793 UBR2Q8IWV8 1755 aa25.08■■□□□ 1.61
GMDS-205ENST00000486793 PRAMEF22A3QJZ6 481 aa25.08■■□□□ 1.61
GMDS-205ENST00000486793 RTF1Q92541 710 aaKnown RBP25.08■■□□□ 1.61
GMDS-205ENST00000486793 KLRG1Q96E93 195 aa25.08■■□□□ 1.61
GMDS-205ENST00000486793 CNBD1Q8NA66 436 aa25.07■■□□□ 1.6
GMDS-205ENST00000486793 AFDNP55196 1824 aaKnown RBP25.07■■□□□ 1.6
GMDS-205ENST00000486793 NPHP1O15259 732 aa25.06■■□□□ 1.6
GMDS-205ENST00000486793 SNRPA1P09661 255 aaKnown RBP25.06■■□□□ 1.6
GMDS-205ENST00000486793 DCTN1Q14203 1278 aa25.05■■□□□ 1.6
GMDS-205ENST00000486793 ST5P78524 1137 aa25.04■■□□□ 1.6
GMDS-205ENST00000486793 DPY19L2Q6NUT2 758 aa25.04■■□□□ 1.6
GMDS-205ENST00000486793 POTECB2RU33 542 aa25.03■■□□□ 1.6
GMDS-205ENST00000486793 ERFEQ4G0M1 354 aa25.03■■□□□ 1.6
GMDS-205ENST00000486793 CNKSR1Q969H4 720 aa25.03■■□□□ 1.6
GMDS-205ENST00000486793 SRGNP10124 158 aa25.02■■□□□ 1.6
GMDS-205ENST00000486793 STYK1Q6J9G0 422 aa25.02■■□□□ 1.6
GMDS-205ENST00000486793 CLEC4GQ6UXB4 293 aa25.02■■□□□ 1.6
GMDS-205ENST00000486793 JMYQ8N9B5 988 aa25.02■■□□□ 1.6
GMDS-205ENST00000486793 HTATSF1O43719 755 aaKnown RBP25.01■■□□□ 1.59
GMDS-205ENST00000486793 MASTLQ96GX5 879 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms