RNA–Protein interactions for RNA: ENST00000486790.2

RCC1-212, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-212ENST00000486790 COL15A1P39059 1388 aa35.62■■■■□ 3.29
RCC1-212ENST00000486790 POLRMTO00411 1230 aaKnown RBP35.61■■■■□ 3.29
RCC1-212ENST00000486790 TM4SF1P30408 202 aa35.61■■■■□ 3.29
RCC1-212ENST00000486790 DDR1Q08345 913 aa35.61■■■■□ 3.29
RCC1-212ENST00000486790 TEX13AQ9BXU3 409 aaPredicted RBP35.61■■■■□ 3.29
RCC1-212ENST00000486790 KCPQ6ZWJ8 1503 aa35.61■■■■□ 3.29
RCC1-212ENST00000486790 A0A087WZG4 1122 aa35.59■■■■□ 3.29
RCC1-212ENST00000486790 HSPA6P17066 643 aa35.59■■■■□ 3.29
RCC1-212ENST00000486790 KCNA3P22001 575 aa35.59■■■■□ 3.29
RCC1-212ENST00000486790 CEP350Q5VT06 3117 aa35.59■■■■□ 3.29
RCC1-212ENST00000486790 NUDCQ9Y266 331 aa35.58■■■■□ 3.29
RCC1-212ENST00000486790 NPM2Q86SE8 214 aaKnown RBP35.57■■■■□ 3.28
RCC1-212ENST00000486790 ZBTB1Q9Y2K1 713 aa35.57■■■■□ 3.28
RCC1-212ENST00000486790 UBR2Q8IWV8 1755 aa35.56■■■■□ 3.28
RCC1-212ENST00000486790 COL3A1P02461 1466 aaPredicted RBP35.55■■■■□ 3.28
RCC1-212ENST00000486790 KIF3CO14782 793 aa35.54■■■■□ 3.28
RCC1-212ENST00000486790 CANXP27824 592 aaKnown RBP35.53■■■■□ 3.28
RCC1-212ENST00000486790 NFIXQ14938 502 aa35.52■■■■□ 3.28
RCC1-212ENST00000486790 C9orf131Q5VYM1 1079 aa35.52■■■■□ 3.28
RCC1-212ENST00000486790 ZNF790Q6PG37 636 aa35.52■■■■□ 3.28
RCC1-212ENST00000486790 CHRNA5P30532 468 aa35.5■■■■□ 3.27
RCC1-212ENST00000486790 TOMM70O94826 608 aa35.49■■■■□ 3.27
RCC1-212ENST00000486790 IL17REQ8NFR9 667 aa35.49■■■■□ 3.27
RCC1-212ENST00000486790 FMNL2Q96PY5 1086 aa35.49■■■■□ 3.27
RCC1-212ENST00000486790 SERPINB2P05120 415 aa35.48■■■■□ 3.27
RCC1-212ENST00000486790 C16orf71Q8IYS4 520 aaPredicted RBP35.48■■■■□ 3.27
RCC1-212ENST00000486790 KDM2BQ8NHM5 1336 aa35.48■■■■□ 3.27
RCC1-212ENST00000486790 HEG1Q9ULI3 1381 aa35.48■■■■□ 3.27
RCC1-212ENST00000486790 AFDNP55196 1824 aaKnown RBP35.47■■■■□ 3.27
RCC1-212ENST00000486790 EIF5P55010 431 aaKnown RBP35.46■■■■□ 3.27
RCC1-212ENST00000486790 ZNF496Q96IT1 587 aaPredicted RBP35.46■■■■□ 3.27
RCC1-212ENST00000486790 PRKAR2BP31323 418 aa35.45■■■■□ 3.27
RCC1-212ENST00000486790 RTF1Q92541 710 aaKnown RBP35.45■■■■□ 3.27
RCC1-212ENST00000486790 RNF181Q9P0P0 153 aa35.45■■■■□ 3.27
RCC1-212ENST00000486790 PDZRN3Q9UPQ7 1066 aa35.45■■■■□ 3.27
RCC1-212ENST00000486790 NRXN2Q9P2S2 1712 aa35.43■■■■□ 3.26
RCC1-212ENST00000486790 BTBD11A6QL63 1104 aa35.43■■■■□ 3.26
RCC1-212ENST00000486790 H0YIN7 160 aa35.43■■■■□ 3.26
RCC1-212ENST00000486790 SIPA1L3O60292 1781 aaPredicted RBP35.43■■■■□ 3.26
RCC1-212ENST00000486790 IL6STP40189 918 aaPredicted RBP35.42■■■■□ 3.26
RCC1-212ENST00000486790 APLP1P51693 650 aa35.42■■■■□ 3.26
RCC1-212ENST00000486790 TTLL6Q8N841 843 aa35.42■■■■□ 3.26
RCC1-212ENST00000486790 ZNF330Q9Y3S2 320 aaPredicted RBP35.42■■■■□ 3.26
RCC1-212ENST00000486790 CEMIPQ8WUJ3 1361 aa35.41■■■■□ 3.26
RCC1-212ENST00000486790 RSPH6AQ9H0K4 717 aa35.41■■■■□ 3.26
RCC1-212ENST00000486790 BCL2L12Q9HB09 334 aa35.41■■■■□ 3.26
RCC1-212ENST00000486790 ZC3H4Q9UPT8 1303 aaKnown RBP35.4■■■■□ 3.26
RCC1-212ENST00000486790 U2AF1L5P0DN76 240 aaPredicted RBP35.4■■■■□ 3.26
RCC1-212ENST00000486790 U2AF1Q01081 240 aaKnown RBP eCLIP35.4■■■■□ 3.26
RCC1-212ENST00000486790 BICDL1Q6ZP65 573 aa35.39■■■■□ 3.26
RCC1-212ENST00000486790 C2CD5Q86YS7 1000 aa35.39■■■■□ 3.26
RCC1-212ENST00000486790 NMRK2Q9NPI5 230 aa35.38■■■■□ 3.25
RCC1-212ENST00000486790 NPHP1O15259 732 aa35.37■■■■□ 3.25
RCC1-212ENST00000486790 NEFMP07197 916 aa35.37■■■■□ 3.25
RCC1-212ENST00000486790 PDE6BP35913 854 aa35.37■■■■□ 3.25
RCC1-212ENST00000486790 DLEC1Q9Y238 1755 aa35.36■■■■□ 3.25
RCC1-212ENST00000486790 SBF1O95248 1867 aa35.36■■■■□ 3.25
RCC1-212ENST00000486790 RBM46Q8TBY0 533 aaKnown RBP35.36■■■■□ 3.25
RCC1-212ENST00000486790 PHACTR3Q96KR7 559 aa35.36■■■■□ 3.25
RCC1-212ENST00000486790 CARMIL3Q8ND23 1372 aa35.36■■■■□ 3.25
RCC1-212ENST00000486790 PPP2R1AP30153 589 aa35.34■■■■□ 3.25
RCC1-212ENST00000486790 SETDB2Q96T68 719 aa35.34■■■■□ 3.25
RCC1-212ENST00000486790 LMNB1P20700 586 aa35.33■■■■□ 3.25
RCC1-212ENST00000486790 BRIP1Q9BX63 1249 aa35.33■■■■□ 3.25
RCC1-212ENST00000486790 TBC1D2BQ9UPU7 963 aa35.33■■■■□ 3.25
RCC1-212ENST00000486790 HTATSF1O43719 755 aaKnown RBP35.32■■■■□ 3.24
RCC1-212ENST00000486790 TBC1D9BQ66K14 1250 aa35.32■■■■□ 3.24
RCC1-212ENST00000486790 SCN7AQ01118 1682 aa35.32■■■■□ 3.24
RCC1-212ENST00000486790 FSTL1Q12841 308 aa35.3■■■■□ 3.24
RCC1-212ENST00000486790 A1BGP04217 495 aa35.29■■■■□ 3.24
RCC1-212ENST00000486790 ZNF622Q969S3 477 aaKnown RBP eCLIP35.29■■■■□ 3.24
RCC1-212ENST00000486790 TNRC6CQ9HCJ0 1690 aaKnown RBP35.28■■■■□ 3.24
RCC1-212ENST00000486790 SNRPA1P09661 255 aaKnown RBP35.28■■■■□ 3.24
RCC1-212ENST00000486790 ST5P78524 1137 aa35.28■■■■□ 3.24
RCC1-212ENST00000486790 ZNF652Q9Y2D9 606 aa35.28■■■■□ 3.24
RCC1-212ENST00000486790 DZIP3Q86Y13 1208 aaKnown RBP35.27■■■■□ 3.24
RCC1-212ENST00000486790 CNBD1Q8NA66 436 aa35.27■■■■□ 3.24
RCC1-212ENST00000486790 RASSF7Q02833 373 aa35.25■■■■□ 3.23
RCC1-212ENST00000486790 RRAGCQ9HB90 399 aa35.25■■■■□ 3.23
RCC1-212ENST00000486790 PRR5LQ6MZQ0 368 aa35.24■■■■□ 3.23
RCC1-212ENST00000486790 CLEC4GQ6UXB4 293 aa35.24■■■■□ 3.23
RCC1-212ENST00000486790 MCM10Q7L590 875 aa35.24■■■■□ 3.23
RCC1-212ENST00000486790 KCNQ3O43525 872 aa35.23■■■■□ 3.23
RCC1-212ENST00000486790 CAMTA2O94983 1202 aa35.23■■■■□ 3.23
RCC1-212ENST00000486790 CNKSR1Q969H4 720 aa35.22■■■■□ 3.23
RCC1-212ENST00000486790 PNNQ9H307 717 aaKnown RBP35.21■■■■□ 3.23
RCC1-212ENST00000486790 USP16Q9Y5T5 823 aa35.21■■■■□ 3.23
RCC1-212ENST00000486790 GLTPD2A6NH11 291 aa35.2■■■■□ 3.23
RCC1-212ENST00000486790 SOGA3Q5TF21 947 aa35.2■■■■□ 3.23
RCC1-212ENST00000486790 TAF7Q15545 349 aaPredicted RBP35.19■■■■□ 3.22
RCC1-212ENST00000486790 CCDC88AQ3V6T2 1871 aa35.19■■■■□ 3.22
RCC1-212ENST00000486790 DPY19L2Q6NUT2 758 aa35.19■■■■□ 3.22
RCC1-212ENST00000486790 SMC1BQ8NDV3 1235 aa35.19■■■■□ 3.22
RCC1-212ENST00000486790 ANKRD31Q8N7Z5 1873 aa35.18■■■■□ 3.22
RCC1-212ENST00000486790 RGL2O15211 777 aa35.18■■■■□ 3.22
RCC1-212ENST00000486790 BCORQ6W2J9 1755 aa35.18■■■■□ 3.22
RCC1-212ENST00000486790 VEGFAP15692 232 aaPredicted RBP35.17■■■■□ 3.22
RCC1-212ENST00000486790 STYK1Q6J9G0 422 aa35.17■■■■□ 3.22
RCC1-212ENST00000486790 PNISRQ8TF01 805 aaKnown RBP35.17■■■■□ 3.22
RCC1-212ENST00000486790 NBPF5PQ86XG9 351 aaPredicted RBP35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms