RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 PRKAR2BP31323 418 aa18.37■□□□□ 0.53
SCAF4-206ENST00000485790 ZBTB1Q9Y2K1 713 aa18.37■□□□□ 0.53
SCAF4-206ENST00000485790 BTBD11A6QL63 1104 aa18.36■□□□□ 0.53
SCAF4-206ENST00000485790 SERPINB2P05120 415 aa18.36■□□□□ 0.53
SCAF4-206ENST00000485790 NEFMP07197 916 aa18.36■□□□□ 0.53
SCAF4-206ENST00000485790 NFIXQ14938 502 aa18.36■□□□□ 0.53
SCAF4-206ENST00000485790 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
SCAF4-206ENST00000485790 PHACTR3Q96KR7 559 aa18.36■□□□□ 0.53
SCAF4-206ENST00000485790 CICQ96RK0 1608 aaPredicted RBP18.35■□□□□ 0.53
SCAF4-206ENST00000485790 ADCY9O60503 1353 aa18.35■□□□□ 0.53
SCAF4-206ENST00000485790 PPP2R1AP30153 589 aa18.35■□□□□ 0.53
SCAF4-206ENST00000485790 CHRNA5P30532 468 aa18.35■□□□□ 0.53
SCAF4-206ENST00000485790 EIF5P55010 431 aaKnown RBP18.35■□□□□ 0.53
SCAF4-206ENST00000485790 H0YIN7 160 aa18.34■□□□□ 0.53
SCAF4-206ENST00000485790 C9orf131Q5VYM1 1079 aa18.34■□□□□ 0.53
SCAF4-206ENST00000485790 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
SCAF4-206ENST00000485790 COL15A1P39059 1388 aa18.33■□□□□ 0.53
SCAF4-206ENST00000485790 IL6STP40189 918 aaPredicted RBP18.33■□□□□ 0.52
SCAF4-206ENST00000485790 BICDL1Q6ZP65 573 aa18.33■□□□□ 0.52
SCAF4-206ENST00000485790 RSPH6AQ9H0K4 717 aa18.33■□□□□ 0.52
SCAF4-206ENST00000485790 PDZRN3Q9UPQ7 1066 aa18.33■□□□□ 0.52
SCAF4-206ENST00000485790 HTATSF1O43719 755 aaKnown RBP18.32■□□□□ 0.52
SCAF4-206ENST00000485790 HSPA6P17066 643 aa18.32■□□□□ 0.52
SCAF4-206ENST00000485790 HEG1Q9ULI3 1381 aa18.31■□□□□ 0.52
SCAF4-206ENST00000485790 TOMM70O94826 608 aa18.31■□□□□ 0.52
SCAF4-206ENST00000485790 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
SCAF4-206ENST00000485790 TTLL6Q8N841 843 aa18.31■□□□□ 0.52
SCAF4-206ENST00000485790 BCL2L12Q9HB09 334 aa18.31■□□□□ 0.52
SCAF4-206ENST00000485790 TBC1D2BQ9UPU7 963 aa18.31■□□□□ 0.52
SCAF4-206ENST00000485790 KIF3CO14782 793 aa18.3■□□□□ 0.52
SCAF4-206ENST00000485790 NPHP1O15259 732 aa18.3■□□□□ 0.52
SCAF4-206ENST00000485790 PDE6BP35913 854 aa18.3■□□□□ 0.52
SCAF4-206ENST00000485790 C2CD5Q86YS7 1000 aa18.3■□□□□ 0.52
SCAF4-206ENST00000485790 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
SCAF4-206ENST00000485790 KDM2BQ8NHM5 1336 aa18.29■□□□□ 0.52
SCAF4-206ENST00000485790 MRC1P22897 1456 aa18.29■□□□□ 0.52
SCAF4-206ENST00000485790 A1BGP04217 495 aa18.29■□□□□ 0.52
SCAF4-206ENST00000485790 SNRPA1P09661 255 aaKnown RBP18.29■□□□□ 0.52
SCAF4-206ENST00000485790 PNNQ9H307 717 aaKnown RBP18.29■□□□□ 0.52
SCAF4-206ENST00000485790 RNF181Q9P0P0 153 aa18.29■□□□□ 0.52
SCAF4-206ENST00000485790 C4AP0C0L4 1744 aa18.29■□□□□ 0.52
SCAF4-206ENST00000485790 BRIP1Q9BX63 1249 aa18.28■□□□□ 0.52
SCAF4-206ENST00000485790 CEMIPQ8WUJ3 1361 aa18.28■□□□□ 0.52
SCAF4-206ENST00000485790 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
SCAF4-206ENST00000485790 MCM10Q7L590 875 aa18.27■□□□□ 0.52
SCAF4-206ENST00000485790 COL5A3P25940 1745 aaPredicted RBP18.26■□□□□ 0.51
SCAF4-206ENST00000485790 KCNQ3O43525 872 aa18.26■□□□□ 0.51
SCAF4-206ENST00000485790 TBC1D9BQ66K14 1250 aa18.26■□□□□ 0.51
SCAF4-206ENST00000485790 ZNF622Q969S3 477 aaKnown RBP eCLIP18.26■□□□□ 0.513e-9■□□□□ 10.6
SCAF4-206ENST00000485790 USP16Q9Y5T5 823 aa18.26■□□□□ 0.51
SCAF4-206ENST00000485790 COL3A1P02461 1466 aaPredicted RBP18.26■□□□□ 0.51
SCAF4-206ENST00000485790 SCN11AQ9UI33 1791 aa18.25■□□□□ 0.51
SCAF4-206ENST00000485790 KCPQ6ZWJ8 1503 aa18.25■□□□□ 0.51
SCAF4-206ENST00000485790 MYH14Q7Z406 1995 aaKnown RBP18.25■□□□□ 0.51
SCAF4-206ENST00000485790 LMNB1P20700 586 aa18.25■□□□□ 0.51
SCAF4-206ENST00000485790 CLEC4GQ6UXB4 293 aa18.25■□□□□ 0.51
SCAF4-206ENST00000485790 DZIP3Q86Y13 1208 aaKnown RBP18.25■□□□□ 0.51
SCAF4-206ENST00000485790 ZNF652Q9Y2D9 606 aa18.25■□□□□ 0.51
SCAF4-206ENST00000485790 APLP1P51693 650 aa18.24■□□□□ 0.51
SCAF4-206ENST00000485790 PNISRQ8TF01 805 aaKnown RBP18.24■□□□□ 0.51
SCAF4-206ENST00000485790 NMRK2Q9NPI5 230 aa18.24■□□□□ 0.51
SCAF4-206ENST00000485790 ST5P78524 1137 aa18.23■□□□□ 0.51
SCAF4-206ENST00000485790 CARMIL3Q8ND23 1372 aa18.22■□□□□ 0.51
SCAF4-206ENST00000485790 CAMTA2O94983 1202 aa18.22■□□□□ 0.51
SCAF4-206ENST00000485790 DCTN1Q14203 1278 aa18.22■□□□□ 0.51
SCAF4-206ENST00000485790 CNBD1Q8NA66 436 aa18.22■□□□□ 0.51
SCAF4-206ENST00000485790 RBM46Q8TBY0 533 aaKnown RBP18.22■□□□□ 0.51
SCAF4-206ENST00000485790 RRAGCQ9HB90 399 aa18.22■□□□□ 0.51
SCAF4-206ENST00000485790 ZC3H4Q9UPT8 1303 aaKnown RBP18.22■□□□□ 0.51
SCAF4-206ENST00000485790 PRR5LQ6MZQ0 368 aa18.21■□□□□ 0.51
SCAF4-206ENST00000485790 DPY19L2Q6NUT2 758 aa18.21■□□□□ 0.51
SCAF4-206ENST00000485790 TPTE2Q6XPS3 522 aa18.21■□□□□ 0.51
SCAF4-206ENST00000485790 CNKSR1Q969H4 720 aa18.21■□□□□ 0.51
SCAF4-206ENST00000485790 TJP1Q07157 1748 aa18.2■□□□□ 0.5
SCAF4-206ENST00000485790 FSTL1Q12841 308 aa18.2■□□□□ 0.5
SCAF4-206ENST00000485790 NBPF5PQ86XG9 351 aaPredicted RBP18.2■□□□□ 0.5
SCAF4-206ENST00000485790 CEP350Q5VT06 3117 aa18.2■□□□□ 0.5
SCAF4-206ENST00000485790 KIF13BQ9NQT8 1826 aa18.19■□□□□ 0.5
SCAF4-206ENST00000485790 RGL2O15211 777 aa18.19■□□□□ 0.5
SCAF4-206ENST00000485790 C21orf2O43822 256 aa18.18■□□□□ 0.5
SCAF4-206ENST00000485790 VEGFAP15692 232 aaPredicted RBP18.18■□□□□ 0.5
SCAF4-206ENST00000485790 SOGA3Q5TF21 947 aa18.18■□□□□ 0.5
SCAF4-206ENST00000485790 STYK1Q6J9G0 422 aa18.18■□□□□ 0.5
SCAF4-206ENST00000485790 CCDC24Q8N4L8 307 aa18.18■□□□□ 0.5
SCAF4-206ENST00000485790 MIS18AQ9NYP9 233 aa18.18■□□□□ 0.5
SCAF4-206ENST00000485790 MAPK8IP3Q9UPT6 1336 aa18.18■□□□□ 0.5
SCAF4-206ENST00000485790 N4BP2Q86UW6 1770 aaPredicted RBP18.17■□□□□ 0.5
SCAF4-206ENST00000485790 GLTPD2A6NH11 291 aa18.17■□□□□ 0.5
SCAF4-206ENST00000485790 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
SCAF4-206ENST00000485790 MASTLQ96GX5 879 aa18.17■□□□□ 0.5
SCAF4-206ENST00000485790 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
SCAF4-206ENST00000485790 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
SCAF4-206ENST00000485790 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
SCAF4-206ENST00000485790 RASSF7Q02833 373 aa18.16■□□□□ 0.5
SCAF4-206ENST00000485790 RALBP1Q15311 655 aa18.16■□□□□ 0.5
SCAF4-206ENST00000485790 NFE2L2Q16236 605 aa18.16■□□□□ 0.5
SCAF4-206ENST00000485790 ZNF219Q9P2Y4 722 aaPredicted RBP18.16■□□□□ 0.5
SCAF4-206ENST00000485790 NIP7Q9Y221 180 aaKnown RBP eCLIP18.16■□□□□ 0.5
SCAF4-206ENST00000485790 SRGNP10124 158 aa18.15■□□□□ 0.5
SCAF4-206ENST00000485790 NBPF26B4DH59 902 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms