RNA–Protein interactions for RNA: ENST00000484047.5

TTC3-218, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 1,945 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-218ENST00000484047 CCDC144BQ3MJ40 725 aa13.17□□□□□ -0.3
TTC3-218ENST00000484047 SLC6A16Q9GZN6 736 aa13.17□□□□□ -0.3
TTC3-218ENST00000484047 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
TTC3-218ENST00000484047 GMLQ99445 158 aa13.16□□□□□ -0.3
TTC3-218ENST00000484047 ITGAEP38570 1179 aa13.15□□□□□ -0.3
TTC3-218ENST00000484047 CFHR5Q9BXR6 569 aa13.15□□□□□ -0.3
TTC3-218ENST00000484047 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.15□□□□□ -0.3
TTC3-218ENST00000484047 FOXK2Q01167 660 aa13.15□□□□□ -0.3
TTC3-218ENST00000484047 CTSHP09668 335 aa13.14□□□□□ -0.31
TTC3-218ENST00000484047 SLC4A9Q96Q91 983 aa13.14□□□□□ -0.31
TTC3-218ENST00000484047 ESF1Q9H501 851 aaKnown RBP13.14□□□□□ -0.31
TTC3-218ENST00000484047 POLIQ9UNA4 740 aa13.14□□□□□ -0.31
TTC3-218ENST00000484047 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
TTC3-218ENST00000484047 SLC9A9Q8IVB4 645 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 GJD3Q8N144 294 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 SCHIP1Q9P0W5 487 aaPredicted RBP13.13□□□□□ -0.31
TTC3-218ENST00000484047 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 GNA15P30679 374 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 ALG1LQ6GMV1 187 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 CYLDQ9NQC7 956 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 TMPRSS4Q9NRS4 437 aa13.13□□□□□ -0.31
TTC3-218ENST00000484047 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
TTC3-218ENST00000484047 STAG2Q8N3U4 1231 aa13.11□□□□□ -0.31
TTC3-218ENST00000484047 ARMC5Q96C12 935 aa13.11□□□□□ -0.31
TTC3-218ENST00000484047 PIF1Q9H611 641 aa13.11□□□□□ -0.31
TTC3-218ENST00000484047 PCDHGB7Q9Y5F8 929 aa13.11□□□□□ -0.31
TTC3-218ENST00000484047 CCDC180Q9P1Z9 1646 aa13.11□□□□□ -0.31
TTC3-218ENST00000484047 RACK1P63244 317 aaKnown RBP13.11□□□□□ -0.31
TTC3-218ENST00000484047 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
TTC3-218ENST00000484047 VASH1Q7L8A9 365 aaPredicted RBP13.11□□□□□ -0.31
TTC3-218ENST00000484047 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
TTC3-218ENST00000484047 TLDC2A0PJX2 215 aa13.1□□□□□ -0.31
TTC3-218ENST00000484047 ST18O60284 1047 aa13.1□□□□□ -0.31
TTC3-218ENST00000484047 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
TTC3-218ENST00000484047 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
TTC3-218ENST00000484047 MTRQ99707 1265 aa13.1□□□□□ -0.31
TTC3-218ENST00000484047 ZNF516Q92618 1163 aa13.09□□□□□ -0.31
TTC3-218ENST00000484047 CRELD1Q96HD1 420 aa13.09□□□□□ -0.31
TTC3-218ENST00000484047 DDX41Q9UJV9 622 aaKnown RBP13.09□□□□□ -0.31
TTC3-218ENST00000484047 DNM1Q05193 864 aaKnown RBP13.08□□□□□ -0.32
TTC3-218ENST00000484047 MYO19Q96H55 970 aa13.08□□□□□ -0.32
TTC3-218ENST00000484047 INPP5FQ9Y2H2 1132 aa13.08□□□□□ -0.32
TTC3-218ENST00000484047 USP3Q9Y6I4 520 aa13.08□□□□□ -0.32
TTC3-218ENST00000484047 A6NJY4 79 aa13.07□□□□□ -0.32
TTC3-218ENST00000484047 RBL2Q08999 1139 aa13.07□□□□□ -0.32
TTC3-218ENST00000484047 ETFBKMTQ8IXQ9 262 aa13.07□□□□□ -0.32
TTC3-218ENST00000484047 MAP4K5Q9Y4K4 846 aa13.07□□□□□ -0.32
TTC3-218ENST00000484047 S1PR4O95977 384 aa13.07□□□□□ -0.32
TTC3-218ENST00000484047 AK5Q9Y6K8 562 aa13.07□□□□□ -0.32
TTC3-218ENST00000484047 BRD2P25440 801 aaKnown RBP13.06□□□□□ -0.32
TTC3-218ENST00000484047 MTFR1Q15390 333 aa13.06□□□□□ -0.32
TTC3-218ENST00000484047 PPP1R18Q6NYC8 613 aa13.06□□□□□ -0.32
TTC3-218ENST00000484047 PSMA6P60900 246 aaKnown RBP13.05□□□□□ -0.32
TTC3-218ENST00000484047 ARID5AQ03989 594 aa13.05□□□□□ -0.32
TTC3-218ENST00000484047 ORC1Q13415 861 aa13.05□□□□□ -0.32
TTC3-218ENST00000484047 EDEM1Q92611 657 aa13.05□□□□□ -0.32
TTC3-218ENST00000484047 MZF1P28698 734 aaPredicted RBP13.05□□□□□ -0.32
TTC3-218ENST00000484047 SMTNP53814 917 aa13.05□□□□□ -0.32
TTC3-218ENST00000484047 ZNF784Q8NCA9 323 aaPredicted RBP13.05□□□□□ -0.32
TTC3-218ENST00000484047 OTUD5Q96G74 571 aa13.05□□□□□ -0.32
TTC3-218ENST00000484047 HS3ST6Q96QI5 342 aa13.05□□□□□ -0.32
TTC3-218ENST00000484047 TBX22Q9Y458 520 aa13.05□□□□□ -0.32
TTC3-218ENST00000484047 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
TTC3-218ENST00000484047 PDGFAP04085 211 aa13.04□□□□□ -0.32
TTC3-218ENST00000484047 NGLY1Q96IV0 654 aa13.04□□□□□ -0.32
TTC3-218ENST00000484047 CSRNP1Q96S65 589 aa13.04□□□□□ -0.32
TTC3-218ENST00000484047 ZSWIM4Q9H7M6 989 aa13.04□□□□□ -0.32
TTC3-218ENST00000484047 RAB6BQ9NRW1 208 aa13.04□□□□□ -0.32
TTC3-218ENST00000484047 SH3PXD2AQ5TCZ1 1133 aa13.03□□□□□ -0.32
TTC3-218ENST00000484047 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
TTC3-218ENST00000484047 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.03□□□□□ -0.32
TTC3-218ENST00000484047 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
TTC3-218ENST00000484047 FBF1Q8TES7 1133 aa13.03□□□□□ -0.32
TTC3-218ENST00000484047 SRA1Q9HD15 236 aaKnown RBP13.03□□□□□ -0.32
TTC3-218ENST00000484047 POTEAQ6S8J7 498 aa13.02□□□□□ -0.32
TTC3-218ENST00000484047 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.32
TTC3-218ENST00000484047 USP48Q86UV5 1035 aa13.02□□□□□ -0.32
TTC3-218ENST00000484047 ZNF654Q8IZM8 581 aa13.02□□□□□ -0.32
TTC3-218ENST00000484047 ZBTB24O43167 697 aaPredicted RBP13.01□□□□□ -0.33
TTC3-218ENST00000484047 USP5P45974 858 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 SDE2Q6IQ49 451 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 MCF2L2Q86YR7 1114 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 NKX2-3Q8TAU0 364 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 LILRA1O75019 489 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 GNRH1P01148 92 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 VARSP26640 1264 aaKnown RBP13.01□□□□□ -0.33
TTC3-218ENST00000484047 TJAP1Q5JTD0 557 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 EGFLAMQ63HQ2 1017 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 THSD4Q6ZMP0 1018 aa13.01□□□□□ -0.33
TTC3-218ENST00000484047 EIF1AYO14602 144 aaKnown RBP13□□□□□ -0.33
TTC3-218ENST00000484047 FSHRP23945 695 aa13□□□□□ -0.33
TTC3-218ENST00000484047 ZAP70P43403 619 aa13□□□□□ -0.33
TTC3-218ENST00000484047 OPLAHO14841 1288 aa13□□□□□ -0.33
TTC3-218ENST00000484047 SKOR1P84550 965 aa13□□□□□ -0.33
TTC3-218ENST00000484047 ARID5BQ14865 1188 aa13□□□□□ -0.33
TTC3-218ENST00000484047 DGKZQ13574 1117 aa12.99□□□□□ -0.33
TTC3-218ENST00000484047 CYP2U1Q7Z449 544 aa12.99□□□□□ -0.33
TTC3-218ENST00000484047 EML1O00423 815 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms