RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TNS2Q63HR2 1409 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 LAMB4A4D0S4 1761 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 LRP6O75581 1613 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 ANXA1P04083 346 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 GNAI3P08754 354 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 NUCB1Q02818 461 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 CEP85Q6P2H3 762 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 DNAAF4Q8WXU2 420 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
CLK3-204ENST00000483723 ADCY9O60503 1353 aa17.63■□□□□ 0.41
CLK3-204ENST00000483723 KCPQ6ZWJ8 1503 aa17.63■□□□□ 0.41
CLK3-204ENST00000483723 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
CLK3-204ENST00000483723 NUTM2BA6NNL0 878 aaPredicted RBP17.63■□□□□ 0.41
CLK3-204ENST00000483723 NUTM2EB1AL46 878 aaPredicted RBP17.63■□□□□ 0.41
CLK3-204ENST00000483723 EXOC5O00471 708 aa17.63■□□□□ 0.41
CLK3-204ENST00000483723 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
CLK3-204ENST00000483723 NUTM2AQ8IVF1 878 aaPredicted RBP17.63■□□□□ 0.41
CLK3-204ENST00000483723 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
CLK3-204ENST00000483723 DCTPP1Q9H773 170 aa17.63■□□□□ 0.41
CLK3-204ENST00000483723 SPATA31A5Q5VU36 1347 aa17.62■□□□□ 0.41
CLK3-204ENST00000483723 SPATA31A7Q8IWB4 1347 aa17.62■□□□□ 0.41
CLK3-204ENST00000483723 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
CLK3-204ENST00000483723 LRP10Q7Z4F1 713 aa17.62■□□□□ 0.41
CLK3-204ENST00000483723 USP44Q9H0E7 712 aa17.62■□□□□ 0.41
CLK3-204ENST00000483723 ITGB4P16144 1822 aa17.61■□□□□ 0.41
CLK3-204ENST00000483723 SRCIN1Q9C0H9 1055 aa17.61■□□□□ 0.41
CLK3-204ENST00000483723 IBTKQ9P2D0 1353 aaPredicted RBP17.61■□□□□ 0.41
CLK3-204ENST00000483723 GNAI2P04899 355 aa17.61■□□□□ 0.41
CLK3-204ENST00000483723 FAM161AQ3B820 660 aa17.61■□□□□ 0.41
CLK3-204ENST00000483723 BARGINQ6ZT62 677 aa17.61■□□□□ 0.41
CLK3-204ENST00000483723 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
CLK3-204ENST00000483723 ALDH1L1O75891 902 aa17.59■□□□□ 0.41
CLK3-204ENST00000483723 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
CLK3-204ENST00000483723 CHD1LQ86WJ1 897 aa17.59■□□□□ 0.41
CLK3-204ENST00000483723 TMOD3Q9NYL9 352 aa17.58■□□□□ 0.41
CLK3-204ENST00000483723 SPATA31A6Q5VVP1 1343 aa17.58■□□□□ 0.41
CLK3-204ENST00000483723 DDX58O95786 925 aaKnown RBP17.58■□□□□ 0.4
CLK3-204ENST00000483723 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.4
CLK3-204ENST00000483723 PIGBQ92521 554 aa17.58■□□□□ 0.4
CLK3-204ENST00000483723 MAP3K2Q9Y2U5 619 aa17.58■□□□□ 0.4
CLK3-204ENST00000483723 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
CLK3-204ENST00000483723 FNBP4Q8N3X1 1017 aaPredicted RBP17.57■□□□□ 0.4
CLK3-204ENST00000483723 BCL9LQ86UU0 1499 aa17.56■□□□□ 0.4
CLK3-204ENST00000483723 HMMRO75330 724 aa17.56■□□□□ 0.4
CLK3-204ENST00000483723 BCL9O00512 1426 aa17.56■□□□□ 0.4
CLK3-204ENST00000483723 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 COPS6Q7L5N1 327 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 VSIG10Q8N0Z9 540 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 XAGE3Q8WTP9 111 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 ATG3Q9NT62 314 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 UBTFL1P0CB47 393 aaPredicted RBP17.55■□□□□ 0.4
CLK3-204ENST00000483723 VPS72Q15906 364 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 DDB1Q16531 1140 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 ILDR2Q71H61 639 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 LINS1Q8NG48 757 aa17.55■□□□□ 0.4
CLK3-204ENST00000483723 NBPF26B4DH59 902 aa17.54■□□□□ 0.4
CLK3-204ENST00000483723 MYL6BP14649 208 aa17.54■□□□□ 0.4
CLK3-204ENST00000483723 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
CLK3-204ENST00000483723 NBPF10Q6P3W6 841 aaKnown RBP17.54■□□□□ 0.4
CLK3-204ENST00000483723 NBPF15Q8N660 670 aa17.54■□□□□ 0.4
CLK3-204ENST00000483723 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
CLK3-204ENST00000483723 LRRFIP2Q9Y608 721 aaKnown RBP17.54■□□□□ 0.4
CLK3-204ENST00000483723 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
CLK3-204ENST00000483723 ASAP1Q9ULH1 1129 aa17.53■□□□□ 0.4
CLK3-204ENST00000483723 UTYO14607 1347 aa17.53■□□□□ 0.4
CLK3-204ENST00000483723 NBPF7P0C2Y1 421 aaPredicted RBP17.52■□□□□ 0.4
CLK3-204ENST00000483723 AIMP1Q12904 312 aaKnown RBP17.52■□□□□ 0.4
CLK3-204ENST00000483723 ANKRD13DQ6ZTN6 518 aa17.52■□□□□ 0.4
CLK3-204ENST00000483723 NGLY1Q96IV0 654 aa17.52■□□□□ 0.4
CLK3-204ENST00000483723 METTL22Q9BUU2 404 aaPredicted RBP17.52■□□□□ 0.4
CLK3-204ENST00000483723 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.52■□□□□ 0.4
CLK3-204ENST00000483723 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.39
CLK3-204ENST00000483723 RIC3Q7Z5B4 369 aa17.52■□□□□ 0.39
CLK3-204ENST00000483723 MARCH10Q8NA82 808 aaPredicted RBP17.51■□□□□ 0.39
CLK3-204ENST00000483723 SSH3Q8TE77 659 aa17.51■□□□□ 0.39
CLK3-204ENST00000483723 HDAC5Q9UQL6 1122 aa17.51■□□□□ 0.39
CLK3-204ENST00000483723 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
CLK3-204ENST00000483723 PNMA6EA0A0J9YXQ4 647 aa17.5■□□□□ 0.39
CLK3-204ENST00000483723 IGKV5-2P06315 115 aa17.5■□□□□ 0.39
CLK3-204ENST00000483723 POLA2Q14181 598 aa17.5■□□□□ 0.39
CLK3-204ENST00000483723 C8orf37Q96NL8 207 aa17.5■□□□□ 0.39
CLK3-204ENST00000483723 MTX1Q13505 466 aa17.5■□□□□ 0.39
CLK3-204ENST00000483723 CWF19L2Q2TBE0 894 aaKnown RBP17.5■□□□□ 0.39
CLK3-204ENST00000483723 PLBD2Q8NHP8 589 aa17.5■□□□□ 0.39
CLK3-204ENST00000483723 ARFGEF2Q9Y6D5 1785 aa17.49■□□□□ 0.39
CLK3-204ENST00000483723 A1BGP04217 495 aa17.49■□□□□ 0.39
CLK3-204ENST00000483723 CCDC9Q9Y3X0 531 aaKnown RBP17.49■□□□□ 0.39
CLK3-204ENST00000483723 NEURL1BA8MQ27 555 aa17.48■□□□□ 0.39
CLK3-204ENST00000483723 PIP4K2AP48426 406 aaPredicted RBP17.48■□□□□ 0.39
CLK3-204ENST00000483723 PRIM1P49642 420 aaKnown RBP17.48■□□□□ 0.39
CLK3-204ENST00000483723 NEXNQ0ZGT2 675 aa17.48■□□□□ 0.39
CLK3-204ENST00000483723 GRM8O00222 908 aa17.47■□□□□ 0.39
CLK3-204ENST00000483723 SOCS7O14512 581 aa17.47■□□□□ 0.39
CLK3-204ENST00000483723 C9orf78Q9NZ63 289 aaPredicted RBP17.47■□□□□ 0.39
CLK3-204ENST00000483723 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
CLK3-204ENST00000483723 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
CLK3-204ENST00000483723 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
CLK3-204ENST00000483723 SLC4A9Q96Q91 983 aa17.47■□□□□ 0.39
CLK3-204ENST00000483723 GCKRQ14397 625 aa17.46■□□□□ 0.39
CLK3-204ENST00000483723 BMP2KLQ5H9B9 411 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 221.2 ms