RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 MRPL14Q6P1L8 145 aaKnown RBP9.1□□□□□ -0.95
UPF3A-207ENST00000481131 MEIOBQ8N635 442 aa9.1□□□□□ -0.95
UPF3A-207ENST00000481131 ZNF395Q9H8N7 513 aaPredicted RBP9.1□□□□□ -0.95
UPF3A-207ENST00000481131 EGFL7Q9UHF1 273 aa9.1□□□□□ -0.95
UPF3A-207ENST00000481131 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
UPF3A-207ENST00000481131 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
UPF3A-207ENST00000481131 PPP1R12BO60237 982 aaPredicted RBP9.09□□□□□ -0.95
UPF3A-207ENST00000481131 PTCD1O75127 700 aaKnown RBP9.09□□□□□ -0.95
UPF3A-207ENST00000481131 CENPCQ03188 943 aa9.09□□□□□ -0.95
UPF3A-207ENST00000481131 MTMR3Q13615 1198 aa9.09□□□□□ -0.95
UPF3A-207ENST00000481131 NAA30Q147X3 362 aaPredicted RBP9.09□□□□□ -0.95
UPF3A-207ENST00000481131 ECM1Q16610 540 aa9.09□□□□□ -0.95
UPF3A-207ENST00000481131 CHMP7Q8WUX9 453 aaPredicted RBP9.09□□□□□ -0.95
UPF3A-207ENST00000481131 MEN1O00255 615 aa9.08□□□□□ -0.96
UPF3A-207ENST00000481131 TERTO14746 1132 aaKnown RBP9.08□□□□□ -0.96
UPF3A-207ENST00000481131 ICMTO60725 284 aa9.08□□□□□ -0.96
UPF3A-207ENST00000481131 POTEAQ6S8J7 498 aa9.08□□□□□ -0.96
UPF3A-207ENST00000481131 STAG2Q8N3U4 1231 aa9.08□□□□□ -0.96
UPF3A-207ENST00000481131 KIFC2Q96AC6 838 aa9.08□□□□□ -0.96
UPF3A-207ENST00000481131 C2orf49Q9BVC5 232 aaPredicted RBP9.08□□□□□ -0.96
UPF3A-207ENST00000481131 H3BRB1 525 aa9.07□□□□□ -0.96
UPF3A-207ENST00000481131 NOM1Q5C9Z4 860 aaKnown RBP9.07□□□□□ -0.96
UPF3A-207ENST00000481131 SH3PXD2AQ5TCZ1 1133 aa9.07□□□□□ -0.96
UPF3A-207ENST00000481131 FOXD4L5Q5VV16 416 aaPredicted RBP9.07□□□□□ -0.96
UPF3A-207ENST00000481131 ZDHHC1Q8WTX9 485 aa9.07□□□□□ -0.96
UPF3A-207ENST00000481131 FOXD4L4Q8WXT5 416 aaPredicted RBP9.07□□□□□ -0.96
UPF3A-207ENST00000481131 SAP130Q9H0E3 1048 aa9.07□□□□□ -0.96
UPF3A-207ENST00000481131 TUT1Q9H6E5 874 aaKnown RBP9.07□□□□□ -0.96
UPF3A-207ENST00000481131 PSMA6P60900 246 aaKnown RBP9.06□□□□□ -0.96
UPF3A-207ENST00000481131 C6orf118Q5T5N4 469 aa9.05□□□□□ -0.96
UPF3A-207ENST00000481131 HELQQ8TDG4 1101 aa9.05□□□□□ -0.96
UPF3A-207ENST00000481131 NLRP3Q96P20 1036 aa9.05□□□□□ -0.96
UPF3A-207ENST00000481131 EML1O00423 815 aa9.04□□□□□ -0.96
UPF3A-207ENST00000481131 FKBP4Q02790 459 aaKnown RBP eCLIP9.04□□□□□ -0.96
UPF3A-207ENST00000481131 TEAD4Q15561 434 aa9.04□□□□□ -0.96
UPF3A-207ENST00000481131 DNAJC14Q6Y2X3 702 aaPredicted RBP9.04□□□□□ -0.96
UPF3A-207ENST00000481131 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
UPF3A-207ENST00000481131 PPARGC1BQ86YN6 1023 aaKnown RBP9.04□□□□□ -0.96
UPF3A-207ENST00000481131 QTRT2Q9H974 415 aaKnown RBP9.04□□□□□ -0.96
UPF3A-207ENST00000481131 BIN2Q9UBW5 565 aaPredicted RBP9.04□□□□□ -0.96
UPF3A-207ENST00000481131 HIRAP54198 1017 aaPredicted RBP9.03□□□□□ -0.96
UPF3A-207ENST00000481131 COX20Q5RI15 118 aa9.03□□□□□ -0.96
UPF3A-207ENST00000481131 GLYCTKQ8IVS8 523 aa9.03□□□□□ -0.96
UPF3A-207ENST00000481131 VTI1AQ96AJ9 217 aa9.03□□□□□ -0.96
UPF3A-207ENST00000481131 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
UPF3A-207ENST00000481131 PARP3Q9Y6F1 533 aa9.03□□□□□ -0.96
UPF3A-207ENST00000481131 TNFRSF10BO14763 440 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 SPINT1O43278 529 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 NPR3P17342 541 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 VEGFBP49765 207 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 ARHGAP4P98171 946 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 SF3B2Q13435 895 aaKnown RBP9.02□□□□□ -0.97
UPF3A-207ENST00000481131 C16orf46Q6P387 395 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 ZSCAN10Q96SZ4 725 aaPredicted RBP9.02□□□□□ -0.97
UPF3A-207ENST00000481131 GRIP2Q9C0E4 1043 aa9.02□□□□□ -0.97
UPF3A-207ENST00000481131 SERTM1A2A2V5 107 aa9.01□□□□□ -0.97
UPF3A-207ENST00000481131 NOS2P35228 1153 aa9.01□□□□□ -0.97
UPF3A-207ENST00000481131 ZNF428Q96B54 188 aa9.01□□□□□ -0.97
UPF3A-207ENST00000481131 TSEN34Q9BSV6 310 aaKnown RBP9.01□□□□□ -0.97
UPF3A-207ENST00000481131 CABP1Q9NZU7 370 aa9.01□□□□□ -0.97
UPF3A-207ENST00000481131 LRFN2Q9ULH4 789 aa9.01□□□□□ -0.97
UPF3A-207ENST00000481131 GPC1P35052 558 aa9□□□□□ -0.97
UPF3A-207ENST00000481131 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
UPF3A-207ENST00000481131 RNF144AP50876 292 aaPredicted RBP9□□□□□ -0.97
UPF3A-207ENST00000481131 MARSP56192 900 aaKnown RBP9□□□□□ -0.97
UPF3A-207ENST00000481131 FAM26DQ5JW98 314 aa9□□□□□ -0.97
UPF3A-207ENST00000481131 L3MBTL2Q969R5 705 aa9□□□□□ -0.97
UPF3A-207ENST00000481131 BMP2P12643 396 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 MPSTP25325 297 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 SCARF1Q14162 830 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 RHBDD1Q8TEB9 315 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 MYO19Q96H55 970 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 NGLY1Q96IV0 654 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 NIFKQ9BYG3 293 aaKnown RBP8.99□□□□□ -0.97
UPF3A-207ENST00000481131 ZNF232Q9UNY5 417 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 HCN4Q9Y3Q4 1203 aa8.99□□□□□ -0.97
UPF3A-207ENST00000481131 C4orf17Q53FE4 359 aa8.98□□□□□ -0.97
UPF3A-207ENST00000481131 TMEM214Q6NUQ4 689 aaKnown RBP8.98□□□□□ -0.97
UPF3A-207ENST00000481131 ALDH16A1Q8IZ83 802 aa8.98□□□□□ -0.97
UPF3A-207ENST00000481131 NXF1Q9UBU9 619 aaKnown RBP8.98□□□□□ -0.97
UPF3A-207ENST00000481131 CHMP3Q9Y3E7 222 aa8.98□□□□□ -0.97
UPF3A-207ENST00000481131 TXLNAP40222 546 aa8.97□□□□□ -0.97
UPF3A-207ENST00000481131 SLC27A3Q5K4L6 730 aa8.97□□□□□ -0.97
UPF3A-207ENST00000481131 NPAS3Q8IXF0 933 aa8.97□□□□□ -0.97
UPF3A-207ENST00000481131 POLMQ9NP87 494 aaPredicted RBP8.97□□□□□ -0.97
UPF3A-207ENST00000481131 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.97□□□□□ -0.97
UPF3A-207ENST00000481131 STK17AQ9UEE5 414 aa8.97□□□□□ -0.97
UPF3A-207ENST00000481131 DNMT3LQ9UJW3 386 aa8.97□□□□□ -0.97
UPF3A-207ENST00000481131 SOS2Q07890 1332 aaPredicted RBP8.97□□□□□ -0.97
UPF3A-207ENST00000481131 ZBTB39O15060 712 aa8.96□□□□□ -0.98
UPF3A-207ENST00000481131 RNF217Q8TC41 542 aa8.96□□□□□ -0.98
UPF3A-207ENST00000481131 PHACTR1Q9C0D0 580 aa8.96□□□□□ -0.98
UPF3A-207ENST00000481131 STIM2Q9P246 746 aa8.96□□□□□ -0.98
UPF3A-207ENST00000481131 SPATA31C2B4DYI2 1134 aa8.95□□□□□ -0.98
UPF3A-207ENST00000481131 FAM13AO94988 1023 aa8.95□□□□□ -0.98
UPF3A-207ENST00000481131 LORP23490 312 aaPredicted RBP8.95□□□□□ -0.98
UPF3A-207ENST00000481131 PLA2G4AP47712 749 aa8.95□□□□□ -0.98
UPF3A-207ENST00000481131 INSM1Q01101 510 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms