RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-215ENST00000481116 USP42Q9H9J4 1324 aaKnown RBP17.05■□□□□ 0.32
ABCF3-215ENST00000481116 MAPK8IP3Q9UPT6 1336 aa17.05■□□□□ 0.32
ABCF3-215ENST00000481116 PRAMEF22A3QJZ6 481 aa17.05■□□□□ 0.32
ABCF3-215ENST00000481116 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-215ENST00000481116 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
ABCF3-215ENST00000481116 NLGN1Q8N2Q7 840 aa17.05■□□□□ 0.32
ABCF3-215ENST00000481116 FMNL2Q96PY5 1086 aa17.05■□□□□ 0.32
ABCF3-215ENST00000481116 KIAA1551Q9HCM1 1747 aa17.04■□□□□ 0.32
ABCF3-215ENST00000481116 COL15A1P39059 1388 aa17.04■□□□□ 0.32
ABCF3-215ENST00000481116 FKBP8Q14318 412 aa17.04■□□□□ 0.32
ABCF3-215ENST00000481116 TAF7Q15545 349 aaPredicted RBP17.04■□□□□ 0.32
ABCF3-215ENST00000481116 GPR162Q16538 588 aa17.04■□□□□ 0.32
ABCF3-215ENST00000481116 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
ABCF3-215ENST00000481116 CD2APQ9Y5K6 639 aa17.04■□□□□ 0.32
ABCF3-215ENST00000481116 AFDNP55196 1824 aaKnown RBP17.04■□□□□ 0.32
ABCF3-215ENST00000481116 STARD3NLO95772 234 aa17.03■□□□□ 0.32
ABCF3-215ENST00000481116 USPL1Q5W0Q7 1092 aa17.03■□□□□ 0.32
ABCF3-215ENST00000481116 WWC3Q9ULE0 1092 aa17.03■□□□□ 0.32
ABCF3-215ENST00000481116 USP16Q9Y5T5 823 aa17.03■□□□□ 0.32
ABCF3-215ENST00000481116 A1BGP04217 495 aa17.02■□□□□ 0.32
ABCF3-215ENST00000481116 RRP7AQ9Y3A4 280 aaKnown RBP17.02■□□□□ 0.32
ABCF3-215ENST00000481116 UTRNP46939 3433 aa17.02■□□□□ 0.31
ABCF3-215ENST00000481116 ZPR1O75312 459 aa17.01■□□□□ 0.31
ABCF3-215ENST00000481116 YBX3P16989 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABCF3-215ENST00000481116 YY1P25490 414 aa17.01■□□□□ 0.31
ABCF3-215ENST00000481116 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-215ENST00000481116 RIPK4P57078 832 aa17.01■□□□□ 0.31
ABCF3-215ENST00000481116 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABCF3-215ENST00000481116 TEX13AQ9BXU3 409 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-215ENST00000481116 ADAMTS8Q9UP79 889 aa17.01■□□□□ 0.31
ABCF3-215ENST00000481116 ZNF330Q9Y3S2 320 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-215ENST00000481116 LAMB4A4D0S4 1761 aa17.01■□□□□ 0.31
ABCF3-215ENST00000481116 TMPOP42166 694 aaKnown RBP17■□□□□ 0.31
ABCF3-215ENST00000481116 NEUROD2Q15784 382 aa17■□□□□ 0.31
ABCF3-215ENST00000481116 PARP3Q9Y6F1 533 aa17■□□□□ 0.31
ABCF3-215ENST00000481116 GOLGB1Q14789 3259 aaKnown RBP17■□□□□ 0.31
ABCF3-215ENST00000481116 EIF5P55010 431 aaKnown RBP16.99■□□□□ 0.31
ABCF3-215ENST00000481116 DDR1Q08345 913 aa16.99■□□□□ 0.31
ABCF3-215ENST00000481116 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
ABCF3-215ENST00000481116 NARFQ9UHQ1 456 aa16.99■□□□□ 0.31
ABCF3-215ENST00000481116 SCN7AQ01118 1682 aa16.98■□□□□ 0.31
ABCF3-215ENST00000481116 BCORQ6W2J9 1755 aa16.98■□□□□ 0.31
ABCF3-215ENST00000481116 SNRPA1P09661 255 aaKnown RBP16.98■□□□□ 0.31
ABCF3-215ENST00000481116 CCDC184Q52MB2 194 aa16.98■□□□□ 0.31
ABCF3-215ENST00000481116 TBC1D2BQ9UPU7 963 aa16.98■□□□□ 0.31
ABCF3-215ENST00000481116 BRCA1P38398 1863 aaKnown RBP16.98■□□□□ 0.31
ABCF3-215ENST00000481116 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
ABCF3-215ENST00000481116 TM4SF1P30408 202 aa16.97■□□□□ 0.31
ABCF3-215ENST00000481116 RUNDC1Q96C34 613 aa16.97■□□□□ 0.31
ABCF3-215ENST00000481116 POLRMTO00411 1230 aaKnown RBP16.96■□□□□ 0.31
ABCF3-215ENST00000481116 NFIXQ14938 502 aa16.96■□□□□ 0.31
ABCF3-215ENST00000481116 PXDNLA1KZ92 1463 aa16.96■□□□□ 0.31
ABCF3-215ENST00000481116 NRXN2Q9P2S2 1712 aa16.96■□□□□ 0.3
ABCF3-215ENST00000481116 A0A0G2JLW4 131 aa16.95■□□□□ 0.3
ABCF3-215ENST00000481116 IL6STP40189 918 aaPredicted RBP16.95■□□□□ 0.3
ABCF3-215ENST00000481116 EIF4A1P60842 406 aaKnown RBP16.95■□□□□ 0.3
ABCF3-215ENST00000481116 BICDL1Q6ZP65 573 aa16.95■□□□□ 0.3
ABCF3-215ENST00000481116 PNISRQ8TF01 805 aaKnown RBP16.95■□□□□ 0.3
ABCF3-215ENST00000481116 A0A087WZG4 1122 aa16.94■□□□□ 0.3
ABCF3-215ENST00000481116 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
ABCF3-215ENST00000481116 DPEP1P16444 411 aa16.93■□□□□ 0.3
ABCF3-215ENST00000481116 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
ABCF3-215ENST00000481116 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
ABCF3-215ENST00000481116 TSPYL4Q9UJ04 414 aa16.93■□□□□ 0.3
ABCF3-215ENST00000481116 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
ABCF3-215ENST00000481116 GIGYF1O75420 1035 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-215ENST00000481116 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
ABCF3-215ENST00000481116 TGFB2P61812 414 aa16.92■□□□□ 0.3
ABCF3-215ENST00000481116 TBC1D9BQ66K14 1250 aa16.92■□□□□ 0.3
ABCF3-215ENST00000481116 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
ABCF3-215ENST00000481116 ANKRD31Q8N7Z5 1873 aa16.92■□□□□ 0.3
ABCF3-215ENST00000481116 NUP98P52948 1817 aa16.91■□□□□ 0.3
ABCF3-215ENST00000481116 GRIN3BO60391 1043 aa16.91■□□□□ 0.3
ABCF3-215ENST00000481116 SERPINB2P05120 415 aa16.91■□□□□ 0.3
ABCF3-215ENST00000481116 LMOD3Q0VAK6 560 aa16.91■□□□□ 0.3
ABCF3-215ENST00000481116 NPM2Q86SE8 214 aaKnown RBP16.91■□□□□ 0.3
ABCF3-215ENST00000481116 SENP3-EIF4A1A0A087X0R7 540 aa16.9■□□□□ 0.3
ABCF3-215ENST00000481116 KCNA3P22001 575 aa16.9■□□□□ 0.3
ABCF3-215ENST00000481116 NGEFQ8N5V2 710 aa16.9■□□□□ 0.3
ABCF3-215ENST00000481116 LAS1LQ9Y4W2 734 aaKnown RBP16.9■□□□□ 0.3
ABCF3-215ENST00000481116 ARFGEF1Q9Y6D6 1849 aa16.9■□□□□ 0.3
ABCF3-215ENST00000481116 APAF1O14727 1248 aa16.89■□□□□ 0.29
ABCF3-215ENST00000481116 CHRNA5P30532 468 aa16.89■□□□□ 0.29
ABCF3-215ENST00000481116 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.29
ABCF3-215ENST00000481116 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
ABCF3-215ENST00000481116 ANP32CO43423 234 aa16.88■□□□□ 0.29
ABCF3-215ENST00000481116 CCDC24Q8N4L8 307 aa16.88■□□□□ 0.29
ABCF3-215ENST00000481116 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
ABCF3-215ENST00000481116 CARMIL3Q8ND23 1372 aa16.88■□□□□ 0.29
ABCF3-215ENST00000481116 MYL6BP14649 208 aa16.87■□□□□ 0.29
ABCF3-215ENST00000481116 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
ABCF3-215ENST00000481116 KRT24Q2M2I5 525 aa16.86■□□□□ 0.29
ABCF3-215ENST00000481116 COL11A2P13942 1736 aaPredicted RBP16.85■□□□□ 0.29
ABCF3-215ENST00000481116 CHL1O00533 1208 aa16.85■□□□□ 0.29
ABCF3-215ENST00000481116 HLFQ16534 295 aa16.85■□□□□ 0.29
ABCF3-215ENST00000481116 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
ABCF3-215ENST00000481116 NECTIN2Q92692 538 aa16.85■□□□□ 0.29
ABCF3-215ENST00000481116 TTLL7Q6ZT98 887 aa16.84■□□□□ 0.29
ABCF3-215ENST00000481116 SETDB2Q96T68 719 aa16.84■□□□□ 0.29
ABCF3-215ENST00000481116 MRS2Q9HD23 443 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms