RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 INTS5Q6P9B9 1019 aaKnown RBP12.08□□□□□ -0.48
VCP-206ENST00000480327 NUDCQ9Y266 331 aa12.08□□□□□ -0.48
VCP-206ENST00000480327 ANKRD31Q8N7Z5 1873 aa12.08□□□□□ -0.48
VCP-206ENST00000480327 USP42Q9H9J4 1324 aaKnown RBP12.08□□□□□ -0.48
VCP-206ENST00000480327 RFC4P35249 363 aa12.07□□□□□ -0.48
VCP-206ENST00000480327 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
VCP-206ENST00000480327 NMRK2Q9NPI5 230 aa12.06□□□□□ -0.48
VCP-206ENST00000480327 CCDC87Q9NVE4 849 aa12.06□□□□□ -0.48
VCP-206ENST00000480327 TNRC6CQ9HCJ0 1690 aaKnown RBP12.06□□□□□ -0.48
VCP-206ENST00000480327 FCHSD2O94868 740 aa12.05□□□□□ -0.48
VCP-206ENST00000480327 TM4SF1P30408 202 aa12.05□□□□□ -0.48
VCP-206ENST00000480327 C1orf141Q5JVX7 400 aa12.05□□□□□ -0.48
VCP-206ENST00000480327 ARHGAP27Q6ZUM4 889 aa12.05□□□□□ -0.48
VCP-206ENST00000480327 DNAJC10Q8IXB1 793 aa12.05□□□□□ -0.48
VCP-206ENST00000480327 PARP3Q9Y6F1 533 aa12.05□□□□□ -0.48
VCP-206ENST00000480327 PCNTO95613 3336 aa12.05□□□□□ -0.48
VCP-206ENST00000480327 COL11A2P13942 1736 aaPredicted RBP12.04□□□□□ -0.48
VCP-206ENST00000480327 TIAM2Q8IVF5 1701 aa12.04□□□□□ -0.48
VCP-206ENST00000480327 POLRMTO00411 1230 aaKnown RBP12.04□□□□□ -0.48
VCP-206ENST00000480327 CHRNA5P30532 468 aa12.04□□□□□ -0.48
VCP-206ENST00000480327 MRS2Q9HD23 443 aa12.04□□□□□ -0.48
VCP-206ENST00000480327 SOS1Q07889 1333 aaPredicted RBP12.04□□□□□ -0.48
VCP-206ENST00000480327 CYP19A1P11511 503 aaPredicted RBP12.03□□□□□ -0.48
VCP-206ENST00000480327 PRKAR2BP31323 418 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 SLC39A6Q13433 755 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
VCP-206ENST00000480327 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 MIER1Q8N108 512 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 DNAJC5GQ8N7S2 189 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 SLC52A2Q9HAB3 445 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 CACNA1SQ13698 1873 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 SCN7AQ01118 1682 aa12.03□□□□□ -0.48
VCP-206ENST00000480327 DICER1Q9UPY3 1922 aaKnown RBP12.02□□□□□ -0.49
VCP-206ENST00000480327 RNMTO43148 476 aaKnown RBP12.02□□□□□ -0.49
VCP-206ENST00000480327 TOMM70O94826 608 aa12.02□□□□□ -0.49
VCP-206ENST00000480327 PRELPP51888 382 aa12.02□□□□□ -0.49
VCP-206ENST00000480327 C9orf131Q5VYM1 1079 aa12.02□□□□□ -0.49
VCP-206ENST00000480327 USPL1Q5W0Q7 1092 aa12.02□□□□□ -0.49
VCP-206ENST00000480327 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
VCP-206ENST00000480327 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
VCP-206ENST00000480327 MTHFSDQ2M296 383 aaKnown RBP12.01□□□□□ -0.49
VCP-206ENST00000480327 PHACTR3Q96KR7 559 aa12.01□□□□□ -0.49
VCP-206ENST00000480327 PIM2Q9P1W9 311 aa12.01□□□□□ -0.49
VCP-206ENST00000480327 FER1L6Q2WGJ9 1857 aa12.01□□□□□ -0.49
VCP-206ENST00000480327 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
VCP-206ENST00000480327 BCORQ6W2J9 1755 aa12□□□□□ -0.49
VCP-206ENST00000480327 DALRD3Q5D0E6 543 aaKnown RBP12□□□□□ -0.49
VCP-206ENST00000480327 CCDC146Q8IYE0 955 aa12□□□□□ -0.49
VCP-206ENST00000480327 ADAMTS8Q9UP79 889 aa12□□□□□ -0.49
VCP-206ENST00000480327 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
VCP-206ENST00000480327 COL15A1P39059 1388 aa12□□□□□ -0.49
VCP-206ENST00000480327 APLP1P51693 650 aa11.99□□□□□ -0.49
VCP-206ENST00000480327 HTRA3P83110 453 aa11.99□□□□□ -0.49
VCP-206ENST00000480327 NFIXQ14938 502 aa11.99□□□□□ -0.49
VCP-206ENST00000480327 NARFQ9UHQ1 456 aa11.99□□□□□ -0.49
VCP-206ENST00000480327 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
VCP-206ENST00000480327 RASSF7Q02833 373 aa11.98□□□□□ -0.49
VCP-206ENST00000480327 FAM9BQ8IZU0 186 aa11.98□□□□□ -0.49
VCP-206ENST00000480327 PNISRQ8TF01 805 aaKnown RBP11.98□□□□□ -0.49
VCP-206ENST00000480327 RNF181Q9P0P0 153 aa11.98□□□□□ -0.49
VCP-206ENST00000480327 NEFMP07197 916 aa11.97□□□□□ -0.49
VCP-206ENST00000480327 RBM46Q8TBY0 533 aaKnown RBP11.97□□□□□ -0.49
VCP-206ENST00000480327 PLEKHF1Q96S99 279 aa11.97□□□□□ -0.49
VCP-206ENST00000480327 SLX4Q8IY92 1834 aa11.97□□□□□ -0.49
VCP-206ENST00000480327 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
VCP-206ENST00000480327 ZPR1O75312 459 aa11.96□□□□□ -0.49
VCP-206ENST00000480327 PNNQ9H307 717 aaKnown RBP11.96□□□□□ -0.49
VCP-206ENST00000480327 RRAGCQ9HB90 399 aa11.96□□□□□ -0.49
VCP-206ENST00000480327 CCER2I3L3R5 266 aa11.95□□□□□ -0.5
VCP-206ENST00000480327 SERPINB2P05120 415 aa11.95□□□□□ -0.5
VCP-206ENST00000480327 EIF5P55010 431 aaKnown RBP11.95□□□□□ -0.5
VCP-206ENST00000480327 VSIG10Q8N0Z9 540 aa11.95□□□□□ -0.5
VCP-206ENST00000480327 IL17REQ8NFR9 667 aa11.95□□□□□ -0.5
VCP-206ENST00000480327 GAS2L2Q8NHY3 880 aa11.95□□□□□ -0.5
VCP-206ENST00000480327 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
VCP-206ENST00000480327 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
VCP-206ENST00000480327 NEUROD2Q15784 382 aa11.94□□□□□ -0.5
VCP-206ENST00000480327 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
VCP-206ENST00000480327 ZNF496Q96IT1 587 aaPredicted RBP11.94□□□□□ -0.5
VCP-206ENST00000480327 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
VCP-206ENST00000480327 GNAT3A8MTJ3 354 aa11.93□□□□□ -0.5
VCP-206ENST00000480327 NFKBIEO00221 500 aa11.93□□□□□ -0.5
VCP-206ENST00000480327 DLG5Q8TDM6 1919 aa11.93□□□□□ -0.5
VCP-206ENST00000480327 HEG1Q9ULI3 1381 aa11.92□□□□□ -0.5
VCP-206ENST00000480327 FSTL1Q12841 308 aa11.92□□□□□ -0.5
VCP-206ENST00000480327 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
VCP-206ENST00000480327 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
VCP-206ENST00000480327 TBC1D9BQ66K14 1250 aa11.92□□□□□ -0.5
VCP-206ENST00000480327 C2CD5Q86YS7 1000 aa11.92□□□□□ -0.5
VCP-206ENST00000480327 CEMIPQ8WUJ3 1361 aa11.92□□□□□ -0.5
VCP-206ENST00000480327 POTECB2RU33 542 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 APAF1O14727 1248 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 KCNQ3O43525 872 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 LMNB1P20700 586 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 TMPOP42166 694 aaKnown RBP11.91□□□□□ -0.5
VCP-206ENST00000480327 RIPK4P57078 832 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 ZNF790Q6PG37 636 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 BICDL1Q6ZP65 573 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 MCM10Q7L590 875 aa11.91□□□□□ -0.5
VCP-206ENST00000480327 CCDC24Q8N4L8 307 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms