RNA–Protein interactions for RNA: ENST00000479536.2

NF1-209, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-209ENST00000479536 RHBDD1Q8TEB9 315 aa6.74□□□□□ -1.33
NF1-209ENST00000479536 CDCA7Q9BWT1 371 aaPredicted RBP6.74□□□□□ -1.33
NF1-209ENST00000479536 CRISPLD1Q9H336 500 aa6.74□□□□□ -1.33
NF1-209ENST00000479536 ADH6P28332 368 aa6.73□□□□□ -1.33
NF1-209ENST00000479536 TBC1D9Q6ZT07 1266 aa6.73□□□□□ -1.33
NF1-209ENST00000479536 TRIM11Q96F44 468 aa6.73□□□□□ -1.33
NF1-209ENST00000479536 PLVAPQ9BX97 442 aa6.73□□□□□ -1.33
NF1-209ENST00000479536 ZCCHC2Q9C0B9 1178 aaKnown RBP6.73□□□□□ -1.33
NF1-209ENST00000479536 PCDHGC4Q9Y5F7 938 aa6.73□□□□□ -1.33
NF1-209ENST00000479536 SPATA31C1P0DKV0 1188 aa6.72□□□□□ -1.33
NF1-209ENST00000479536 PLA2G4AP47712 749 aa6.72□□□□□ -1.33
NF1-209ENST00000479536 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
NF1-209ENST00000479536 FOXD4L6Q3SYB3 417 aaPredicted RBP6.72□□□□□ -1.33
NF1-209ENST00000479536 FOXD4L3Q6VB84 417 aaPredicted RBP6.72□□□□□ -1.33
NF1-209ENST00000479536 PPARGC1BQ86YN6 1023 aaKnown RBP6.72□□□□□ -1.33
NF1-209ENST00000479536 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
NF1-209ENST00000479536 DNAAF2Q9NVR5 837 aaKnown RBP6.72□□□□□ -1.33
NF1-209ENST00000479536 DCDC2BA2VCK2 349 aa6.71□□□□□ -1.34
NF1-209ENST00000479536 ATXN7O15265 892 aaPredicted RBP6.71□□□□□ -1.34
NF1-209ENST00000479536 STAU1O95793 577 aaKnown RBP6.71□□□□□ -1.34
NF1-209ENST00000479536 TLR1Q15399 786 aa6.71□□□□□ -1.34
NF1-209ENST00000479536 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.34
NF1-209ENST00000479536 KLF15Q9UIH9 416 aa6.71□□□□□ -1.34
NF1-209ENST00000479536 CD33P20138 364 aa6.7□□□□□ -1.34
NF1-209ENST00000479536 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
NF1-209ENST00000479536 AIDAQ96BJ3 306 aa6.7□□□□□ -1.34
NF1-209ENST00000479536 KHNYNO15037 678 aaKnown RBP6.69□□□□□ -1.34
NF1-209ENST00000479536 MAPTP10636 758 aaKnown RBP6.69□□□□□ -1.34
NF1-209ENST00000479536 NLRP8Q86W28 1048 aa6.69□□□□□ -1.34
NF1-209ENST00000479536 PROSER2Q86WR7 435 aaPredicted RBP6.69□□□□□ -1.34
NF1-209ENST00000479536 POM121Q96HA1 1249 aa6.69□□□□□ -1.34
NF1-209ENST00000479536 ETNK1Q9HBU6 452 aa6.69□□□□□ -1.34
NF1-209ENST00000479536 ZFP64Q9NPA5 681 aa6.69□□□□□ -1.34
NF1-209ENST00000479536 TPSG1Q9NRR2 321 aa6.69□□□□□ -1.34
NF1-209ENST00000479536 RAD21O60216 631 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 ATP4AP20648 1035 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 PCBP4P57723 403 aaKnown RBP6.68□□□□□ -1.34
NF1-209ENST00000479536 TNP2Q05952 138 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 NKAPLQ5M9Q1 402 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 CCDC82Q8N4S0 544 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 BANK1Q8NDB2 785 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 AVENQ9NQS1 362 aaPredicted RBP6.68□□□□□ -1.34
NF1-209ENST00000479536 CEP126Q9P2H0 1117 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 PRR12Q9ULL5 1215 aa6.68□□□□□ -1.34
NF1-209ENST00000479536 DYRK3O43781 588 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 APBA3O96018 575 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 PRRT3Q5FWE3 981 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 ARSJQ5FYB0 599 aaPredicted RBP6.67□□□□□ -1.34
NF1-209ENST00000479536 FAM182BQ5T319 152 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 ARTNQ5T4W7 220 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 NBPF11Q86T75 865 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 FNBP4Q8N3X1 1017 aaPredicted RBP6.67□□□□□ -1.34
NF1-209ENST00000479536 C1orf216Q8TAB5 229 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 KRTAP4-12Q9BQ66 201 aa6.67□□□□□ -1.34
NF1-209ENST00000479536 A0A1W2PNR3 127 aa6.66□□□□□ -1.34
NF1-209ENST00000479536 SPDYE3A6NKU9 549 aa6.66□□□□□ -1.34
NF1-209ENST00000479536 SNRKQ9NRH2 765 aa6.66□□□□□ -1.34
NF1-209ENST00000479536 ZNF777Q9ULD5 760 aaPredicted RBP6.66□□□□□ -1.34
NF1-209ENST00000479536 GPR37L1O60883 481 aa6.65□□□□□ -1.34
NF1-209ENST00000479536 USP4Q13107 963 aa6.65□□□□□ -1.34
NF1-209ENST00000479536 TSGA10IPQ3SY00 556 aa6.65□□□□□ -1.34
NF1-209ENST00000479536 ZNF468Q5VIY5 522 aaPredicted RBP6.65□□□□□ -1.34
NF1-209ENST00000479536 NIFKQ9BYG3 293 aaKnown RBP6.65□□□□□ -1.34
NF1-209ENST00000479536 PODXL2Q9NZ53 605 aa6.65□□□□□ -1.34
NF1-209ENST00000479536 DOLKQ9UPQ8 538 aa6.65□□□□□ -1.34
NF1-209ENST00000479536 COG6Q9Y2V7 657 aa6.65□□□□□ -1.34
NF1-209ENST00000479536 GJA3Q9Y6H8 435 aa6.64□□□□□ -1.35
NF1-209ENST00000479536 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
NF1-209ENST00000479536 FAM229AH3BQW9 127 aa6.63□□□□□ -1.35
NF1-209ENST00000479536 ALAS2P22557 587 aa6.63□□□□□ -1.35
NF1-209ENST00000479536 TRIM26Q12899 539 aaPredicted RBP6.63□□□□□ -1.35
NF1-209ENST00000479536 NBPF1Q3BBV0 1214 aa6.63□□□□□ -1.35
NF1-209ENST00000479536 OXLD1Q5BKU9 147 aa6.63□□□□□ -1.35
NF1-209ENST00000479536 PRSS36Q5K4E3 855 aa6.63□□□□□ -1.35
NF1-209ENST00000479536 ELOA3CA0A087WX78 387 aaPredicted RBP6.62□□□□□ -1.35
NF1-209ENST00000479536 ELOA3DA6NLF2 546 aaPredicted RBP6.62□□□□□ -1.35
NF1-209ENST00000479536 TATP17735 454 aaPredicted RBP6.62□□□□□ -1.35
NF1-209ENST00000479536 ELOA3BQ3SY89 546 aa6.62□□□□□ -1.35
NF1-209ENST00000479536 ELOA3Q8NG57 546 aa6.62□□□□□ -1.35
NF1-209ENST00000479536 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
NF1-209ENST00000479536 INHAP05111 366 aa6.61□□□□□ -1.35
NF1-209ENST00000479536 FAM157BP0CG42 384 aa6.61□□□□□ -1.35
NF1-209ENST00000479536 GDF10P55107 478 aa6.61□□□□□ -1.35
NF1-209ENST00000479536 MTMR14Q8NCE2 650 aa6.61□□□□□ -1.35
NF1-209ENST00000479536 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
NF1-209ENST00000479536 ZIC5Q96T25 663 aa6.61□□□□□ -1.35
NF1-209ENST00000479536 STRN4Q9NRL3 753 aa6.61□□□□□ -1.35
NF1-209ENST00000479536 SCNN1DP51172 638 aa6.6□□□□□ -1.35
NF1-209ENST00000479536 SMTNP53814 917 aa6.6□□□□□ -1.35
NF1-209ENST00000479536 TRIM28Q13263 835 aaKnown RBP6.6□□□□□ -1.35
NF1-209ENST00000479536 SLFNL1Q499Z3 407 aa6.6□□□□□ -1.35
NF1-209ENST00000479536 SYT9Q86SS6 491 aa6.6□□□□□ -1.35
NF1-209ENST00000479536 SIRT1Q96EB6 747 aa6.6□□□□□ -1.35
NF1-209ENST00000479536 NACC1Q96RE7 527 aa6.6□□□□□ -1.35
NF1-209ENST00000479536 SERPINA10Q9UK55 444 aa6.6□□□□□ -1.35
NF1-209ENST00000479536 M0R082 166 aa6.59□□□□□ -1.35
NF1-209ENST00000479536 BICDL1Q6ZP65 573 aa6.59□□□□□ -1.35
NF1-209ENST00000479536 ZNF417Q8TAU3 575 aa6.59□□□□□ -1.35
NF1-209ENST00000479536 ZNF587Q96SQ5 575 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms