RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
GCA-208ENST00000479199 PIM2Q9P1W9 311 aa16.34■□□□□ 0.21
GCA-208ENST00000479199 KIF7Q2M1P5 1343 aa16.34■□□□□ 0.21
GCA-208ENST00000479199 COL15A1P39059 1388 aa16.34■□□□□ 0.21
GCA-208ENST00000479199 DALRD3Q5D0E6 543 aaKnown RBP16.33■□□□□ 0.2
GCA-208ENST00000479199 USPL1Q5W0Q7 1092 aa16.33■□□□□ 0.2
GCA-208ENST00000479199 CCER1Q8TC90 406 aaPredicted RBP16.33■□□□□ 0.2
GCA-208ENST00000479199 COL3A1P02461 1466 aaPredicted RBP16.33■□□□□ 0.2
GCA-208ENST00000479199 COL11A2P13942 1736 aaPredicted RBP16.33■□□□□ 0.2
GCA-208ENST00000479199 RNMTO43148 476 aaKnown RBP16.32■□□□□ 0.2
GCA-208ENST00000479199 TOMM70O94826 608 aa16.32■□□□□ 0.2
GCA-208ENST00000479199 ZPR1O75312 459 aa16.31■□□□□ 0.2
GCA-208ENST00000479199 CYP19A1P11511 503 aaPredicted RBP16.31■□□□□ 0.2
GCA-208ENST00000479199 TM4SF1P30408 202 aa16.31■□□□□ 0.2
GCA-208ENST00000479199 APLP1P51693 650 aa16.31■□□□□ 0.2
GCA-208ENST00000479199 ZBTB1Q9Y2K1 713 aa16.31■□□□□ 0.2
GCA-208ENST00000479199 MTHFSDQ2M296 383 aaKnown RBP16.3■□□□□ 0.2
GCA-208ENST00000479199 RNF181Q9P0P0 153 aa16.3■□□□□ 0.2
GCA-208ENST00000479199 DICER1Q9UPY3 1922 aaKnown RBP16.29■□□□□ 0.2
GCA-208ENST00000479199 CARMIL3Q8ND23 1372 aa16.29■□□□□ 0.2
GCA-208ENST00000479199 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
GCA-208ENST00000479199 NFIXQ14938 502 aa16.29■□□□□ 0.2
GCA-208ENST00000479199 RASSF7Q02833 373 aa16.28■□□□□ 0.2
GCA-208ENST00000479199 CC2D1BQ5T0F9 858 aaKnown RBP16.28■□□□□ 0.2
GCA-208ENST00000479199 NARFQ9UHQ1 456 aa16.28■□□□□ 0.2
GCA-208ENST00000479199 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
GCA-208ENST00000479199 BCL2L12Q9HB09 334 aa16.27■□□□□ 0.2
GCA-208ENST00000479199 FER1L6Q2WGJ9 1857 aa16.27■□□□□ 0.19
GCA-208ENST00000479199 C16orf71Q8IYS4 520 aaPredicted RBP16.26■□□□□ 0.19
GCA-208ENST00000479199 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
GCA-208ENST00000479199 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
GCA-208ENST00000479199 KDM2BQ8NHM5 1336 aa16.25■□□□□ 0.19
GCA-208ENST00000479199 PER1O15534 1290 aaPredicted RBP16.25■□□□□ 0.19
GCA-208ENST00000479199 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
GCA-208ENST00000479199 DNAJC5GQ8N7S2 189 aa16.25■□□□□ 0.19
GCA-208ENST00000479199 SERPINB2P05120 415 aa16.24■□□□□ 0.19
GCA-208ENST00000479199 HTRA3P83110 453 aa16.24■□□□□ 0.19
GCA-208ENST00000479199 VSIG10Q8N0Z9 540 aa16.24■□□□□ 0.19
GCA-208ENST00000479199 PRELPP51888 382 aa16.23■□□□□ 0.19
GCA-208ENST00000479199 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
GCA-208ENST00000479199 RRAGCQ9HB90 399 aa16.23■□□□□ 0.19
GCA-208ENST00000479199 BICDL1Q6ZP65 573 aa16.22■□□□□ 0.19
GCA-208ENST00000479199 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
GCA-208ENST00000479199 HEG1Q9ULI3 1381 aa16.22■□□□□ 0.19
GCA-208ENST00000479199 SLX4Q8IY92 1834 aa16.22■□□□□ 0.19
GCA-208ENST00000479199 U2SURPO15042 1029 aaKnown RBP16.21■□□□□ 0.19
GCA-208ENST00000479199 EIF5P55010 431 aaKnown RBP16.21■□□□□ 0.19
GCA-208ENST00000479199 C2CD5Q86YS7 1000 aa16.21■□□□□ 0.19
GCA-208ENST00000479199 ZNF496Q96IT1 587 aaPredicted RBP16.21■□□□□ 0.19
GCA-208ENST00000479199 FSTL1Q12841 308 aa16.2■□□□□ 0.18
GCA-208ENST00000479199 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
GCA-208ENST00000479199 NPC1L1Q9UHC9 1359 aa16.2■□□□□ 0.18
GCA-208ENST00000479199 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
GCA-208ENST00000479199 GNAT3A8MTJ3 354 aa16.19■□□□□ 0.18
GCA-208ENST00000479199 STARD3NLO95772 234 aa16.19■□□□□ 0.18
GCA-208ENST00000479199 LMNB1P20700 586 aa16.19■□□□□ 0.18
GCA-208ENST00000479199 TEFQ10587 303 aa16.19■□□□□ 0.18
GCA-208ENST00000479199 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
GCA-208ENST00000479199 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
GCA-208ENST00000479199 IL17REQ8NFR9 667 aa16.19■□□□□ 0.18
GCA-208ENST00000479199 NFKBIEO00221 500 aa16.18■□□□□ 0.18
GCA-208ENST00000479199 ZNF790Q6PG37 636 aa16.18■□□□□ 0.18
GCA-208ENST00000479199 GAS2L2Q8NHY3 880 aa16.18■□□□□ 0.18
GCA-208ENST00000479199 LAMB4A4D0S4 1761 aa16.18■□□□□ 0.18
GCA-208ENST00000479199 DLG5Q8TDM6 1919 aa16.17■□□□□ 0.18
GCA-208ENST00000479199 CEMIPQ8WUJ3 1361 aa16.17■□□□□ 0.18
GCA-208ENST00000479199 A0A087WZG4 1122 aa16.17■□□□□ 0.18
GCA-208ENST00000479199 H0YIN7 160 aa16.17■□□□□ 0.18
GCA-208ENST00000479199 CCDC24Q8N4L8 307 aa16.17■□□□□ 0.18
GCA-208ENST00000479199 KLRG1Q96E93 195 aa16.17■□□□□ 0.18
GCA-208ENST00000479199 TBC1D2BQ9UPU7 963 aa16.17■□□□□ 0.18
GCA-208ENST00000479199 PRR5LQ6MZQ0 368 aa16.16■□□□□ 0.18
GCA-208ENST00000479199 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
GCA-208ENST00000479199 GLTPD2A6NH11 291 aa16.15■□□□□ 0.18
GCA-208ENST00000479199 KCNQ3O43525 872 aa16.15■□□□□ 0.18
GCA-208ENST00000479199 ZNF622Q969S3 477 aaKnown RBP eCLIP16.15■□□□□ 0.18
GCA-208ENST00000479199 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
GCA-208ENST00000479199 A1BGP04217 495 aa16.14■□□□□ 0.17
GCA-208ENST00000479199 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
GCA-208ENST00000479199 IL6STP40189 918 aaPredicted RBP16.14■□□□□ 0.17
GCA-208ENST00000479199 PHACTR3Q96KR7 559 aa16.14■□□□□ 0.17
GCA-208ENST00000479199 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
GCA-208ENST00000479199 CAMTA2O94983 1202 aa16.13■□□□□ 0.17
GCA-208ENST00000479199 JMYQ8N9B5 988 aa16.13■□□□□ 0.17
GCA-208ENST00000479199 TEX13AQ9BXU3 409 aaPredicted RBP16.13■□□□□ 0.17
GCA-208ENST00000479199 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
GCA-208ENST00000479199 C21orf2O43822 256 aa16.12■□□□□ 0.17
GCA-208ENST00000479199 VEGFAP15692 232 aaPredicted RBP16.12■□□□□ 0.17
GCA-208ENST00000479199 PDE6BP35913 854 aa16.12■□□□□ 0.17
GCA-208ENST00000479199 PIP4K2AP48426 406 aaPredicted RBP16.12■□□□□ 0.17
GCA-208ENST00000479199 CNBD1Q8NA66 436 aa16.12■□□□□ 0.17
GCA-208ENST00000479199 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
GCA-208ENST00000479199 KDM3BQ7LBC6 1761 aa16.11■□□□□ 0.17
GCA-208ENST00000479199 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
GCA-208ENST00000479199 NUP98P52948 1817 aa16.1■□□□□ 0.17
GCA-208ENST00000479199 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
GCA-208ENST00000479199 POTECB2RU33 542 aa16.1■□□□□ 0.17
GCA-208ENST00000479199 DZIP3Q86Y13 1208 aaKnown RBP16.1■□□□□ 0.17
GCA-208ENST00000479199 SCN4AP35499 1836 aa16.1■□□□□ 0.17
GCA-208ENST00000479199 NPHP1O15259 732 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms