RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 ZNF330Q9Y3S2 320 aaPredicted RBP3.34□□□□□ -1.87
SRRM1-211ENST00000478890 ZBBXA8MT70 800 aa3.33□□□□□ -1.88
SRRM1-211ENST00000478890 FGFR3P22607 806 aa3.33□□□□□ -1.88
SRRM1-211ENST00000478890 ADH6P28332 368 aa3.33□□□□□ -1.88
SRRM1-211ENST00000478890 BRPF1P55201 1214 aaPredicted RBP3.33□□□□□ -1.88
SRRM1-211ENST00000478890 LBRQ14739 615 aaKnown RBP3.33□□□□□ -1.88
SRRM1-211ENST00000478890 GOPCQ9HD26 462 aa3.33□□□□□ -1.88
SRRM1-211ENST00000478890 THBS1P07996 1170 aa3.32□□□□□ -1.88
SRRM1-211ENST00000478890 WDR44Q5JSH3 913 aa3.32□□□□□ -1.88
SRRM1-211ENST00000478890 ZNF784Q8NCA9 323 aaPredicted RBP3.32□□□□□ -1.88
SRRM1-211ENST00000478890 ZNF592Q92610 1267 aa3.32□□□□□ -1.88
SRRM1-211ENST00000478890 PRM3Q9NNZ6 103 aa3.32□□□□□ -1.88
SRRM1-211ENST00000478890 CYLDQ9NQC7 956 aa3.32□□□□□ -1.88
SRRM1-211ENST00000478890 TMPRSS4Q9NRS4 437 aa3.32□□□□□ -1.88
SRRM1-211ENST00000478890 NDUFB9Q9Y6M9 179 aa3.32□□□□□ -1.88
SRRM1-211ENST00000478890 ERVH48-1M5A8F1 160 aa3.31□□□□□ -1.88
SRRM1-211ENST00000478890 MED26O95402 600 aa3.31□□□□□ -1.88
SRRM1-211ENST00000478890 AVENQ9NQS1 362 aaPredicted RBP3.31□□□□□ -1.88
SRRM1-211ENST00000478890 MEN1O00255 615 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 FBXO45P0C2W1 286 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 CTBSQ01459 385 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 POU4F2Q12837 409 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 RNF20Q5VTR2 975 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 NBPF10Q6P3W6 841 aaKnown RBP3.3□□□□□ -1.88
SRRM1-211ENST00000478890 SEPT12Q8IYM1 358 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 NBPF15Q8N660 670 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 LENG1Q96BZ8 264 aaPredicted RBP3.3□□□□□ -1.88
SRRM1-211ENST00000478890 OCSTAMPQ9BR26 566 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 TRIM34Q9BYJ4 488 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 TIMMDC1Q9NPL8 285 aa3.3□□□□□ -1.88
SRRM1-211ENST00000478890 ATP5J2-PTCD1G3V325 749 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 SELPP16109 830 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 FSTP19883 344 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 NR1H3Q13133 447 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 UBAP2LQ14157 1087 aaKnown RBP3.29□□□□□ -1.88
SRRM1-211ENST00000478890 FCHSD1Q86WN1 690 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 KDF1Q8NAX2 398 aaPredicted RBP3.29□□□□□ -1.88
SRRM1-211ENST00000478890 ABHD17AQ96GS6 310 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 NLRP3Q96P20 1036 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 PCDHB11Q9Y5F2 797 aa3.29□□□□□ -1.88
SRRM1-211ENST00000478890 ADAMTS4O75173 837 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 GIGYF1O75420 1035 aaPredicted RBP3.28□□□□□ -1.88
SRRM1-211ENST00000478890 WNT11O96014 354 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 MYCP01106 439 aaPredicted RBP3.28□□□□□ -1.88
SRRM1-211ENST00000478890 GTF2E1P29083 439 aaPredicted RBP3.28□□□□□ -1.88
SRRM1-211ENST00000478890 ZNF124Q15973 351 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 SLC27A3Q5K4L6 730 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 CC2D2BQ6DHV5 1058 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 PRR23CQ6ZRP0 262 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 CYP2U1Q7Z449 544 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 MTMR14Q8NCE2 650 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 BANK1Q8NDB2 785 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 GJD4Q96KN9 370 aaPredicted RBP3.28□□□□□ -1.88
SRRM1-211ENST00000478890 WDR26Q9H7D7 661 aa3.28□□□□□ -1.88
SRRM1-211ENST00000478890 ESPNB1AK53 854 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 SPINK2P20155 84 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 MCCD1P59942 119 aaPredicted RBP3.27□□□□□ -1.89
SRRM1-211ENST00000478890 EIF4G2P78344 907 aaKnown RBP eCLIP3.27□□□□□ -1.89
SRRM1-211ENST00000478890 PKN1Q16512 942 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 CCDC125Q86Z20 511 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 ARHGEF10LQ9HCE6 1279 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 PRDM6Q9NQX0 595 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 SNRKQ9NRH2 765 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 RAPGEFL1Q9UHV5 662 aa3.27□□□□□ -1.89
SRRM1-211ENST00000478890 SPATA31C2B4DYI2 1134 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 LILRA1O75019 489 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 ALAS2P22557 587 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 ADD1P35611 737 aaKnown RBP3.26□□□□□ -1.89
SRRM1-211ENST00000478890 ABL2P42684 1182 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 SLFNL1Q499Z3 407 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 ZNF648Q5T619 568 aaPredicted RBP3.26□□□□□ -1.89
SRRM1-211ENST00000478890 INTS5Q6P9B9 1019 aaKnown RBP3.26□□□□□ -1.89
SRRM1-211ENST00000478890 DBX2Q6ZNG2 339 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 RAB6BQ9NRW1 208 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 NDFIP2Q9NV92 336 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 TBC1D2BQ9UPU7 963 aa3.26□□□□□ -1.89
SRRM1-211ENST00000478890 A0A1W2PRU2 124 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 JUNBP17275 347 aaPredicted RBP3.25□□□□□ -1.89
SRRM1-211ENST00000478890 GRIK1P39086 918 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 SCTRP47872 440 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 ERVK-9P63128 1117 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 OXLD1Q5BKU9 147 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 EFHC2Q5JST6 749 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 TAS1R3Q7RTX0 852 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 GPAMQ9HCL2 828 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 KLF15Q9UIH9 416 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 DOLKQ9UPQ8 538 aa3.25□□□□□ -1.89
SRRM1-211ENST00000478890 WASLO00401 505 aaPredicted RBP3.24□□□□□ -1.89
SRRM1-211ENST00000478890 SOCS7O14512 581 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 GSC2O15499 205 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 BNIP3LO60238 219 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 PTCD1O75127 700 aaKnown RBP3.24□□□□□ -1.89
SRRM1-211ENST00000478890 IGHA2P01877 340 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 CSB-PGBD3P0DP91 1061 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 VAC14Q08AM6 782 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 COL9A3Q14050 684 aaPredicted RBP3.24□□□□□ -1.89
SRRM1-211ENST00000478890 GNASQ5JWF2 1037 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 DTX1Q86Y01 620 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 ZDHHC13Q8IUH4 622 aa3.24□□□□□ -1.89
SRRM1-211ENST00000478890 WWC1Q8IX03 1113 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms