RNA–Protein interactions for RNA: ENST00000478336.5

ARF1-208, Transcript of ADP ribosylation factor 1, humanhuman

TSL 2

Gene ARF1, Length 930 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-208ENST00000478336 TRAPPC3LQ5T215 181 aa31.47■■■□□ 2.63
ARF1-208ENST00000478336 ZBTB1Q9Y2K1 713 aa31.46■■■□□ 2.63
ARF1-208ENST00000478336 SOS1Q07889 1333 aaPredicted RBP31.46■■■□□ 2.63
ARF1-208ENST00000478336 ARHGEF1Q92888 912 aaKnown RBP31.45■■■□□ 2.63
ARF1-208ENST00000478336 BABAM1Q9NWV8 329 aa31.45■■■□□ 2.63
ARF1-208ENST00000478336 SNRPA1P09661 255 aaKnown RBP31.44■■■□□ 2.62
ARF1-208ENST00000478336 PPP1R1BQ9UD71 204 aaPredicted RBP31.44■■■□□ 2.62
ARF1-208ENST00000478336 LAMB4A4D0S4 1761 aa31.43■■■□□ 2.62
ARF1-208ENST00000478336 MSL1Q68DK7 614 aa31.43■■■□□ 2.62
ARF1-208ENST00000478336 PRAMEF22A3QJZ6 481 aa31.42■■■□□ 2.62
ARF1-208ENST00000478336 EIF4A1P60842 406 aaKnown RBP31.42■■■□□ 2.62
ARF1-208ENST00000478336 TSPYL4Q9UJ04 414 aa31.42■■■□□ 2.62
ARF1-208ENST00000478336 POLD1P28340 1107 aa31.41■■■□□ 2.62
ARF1-208ENST00000478336 USP16Q9Y5T5 823 aa31.41■■■□□ 2.62
ARF1-208ENST00000478336 RFC4P35249 363 aa31.39■■■□□ 2.62
ARF1-208ENST00000478336 ARXQ96QS3 562 aa31.39■■■□□ 2.62
ARF1-208ENST00000478336 COL15A1P39059 1388 aa31.39■■■□□ 2.62
ARF1-208ENST00000478336 CHL1O00533 1208 aa31.38■■■□□ 2.61
ARF1-208ENST00000478336 CANXP27824 592 aaKnown RBP31.38■■■□□ 2.61
ARF1-208ENST00000478336 GIGYF1O75420 1035 aaPredicted RBP31.37■■■□□ 2.61
ARF1-208ENST00000478336 FAM9BQ8IZU0 186 aa31.37■■■□□ 2.61
ARF1-208ENST00000478336 USP42Q9H9J4 1324 aaKnown RBP31.37■■■□□ 2.61
ARF1-208ENST00000478336 A1BGP04217 495 aa31.36■■■□□ 2.61
ARF1-208ENST00000478336 EIF5P55010 431 aaKnown RBP31.36■■■□□ 2.61
ARF1-208ENST00000478336 GYS1P13807 737 aa31.35■■■□□ 2.61
ARF1-208ENST00000478336 CCER2I3L3R5 266 aa31.34■■■□□ 2.61
ARF1-208ENST00000478336 CCDC27Q2M243 656 aa31.34■■■□□ 2.61
ARF1-208ENST00000478336 NCBP3Q53F19 620 aaKnown RBP31.34■■■□□ 2.61
ARF1-208ENST00000478336 SRP68Q9UHB9 627 aaKnown RBP31.34■■■□□ 2.61
ARF1-208ENST00000478336 IL6STP40189 918 aaPredicted RBP31.33■■■□□ 2.61
ARF1-208ENST00000478336 DIEXFQ68CQ4 756 aaKnown RBP31.33■■■□□ 2.61
ARF1-208ENST00000478336 CFAP44Q96MT7 982 aa31.33■■■□□ 2.61
ARF1-208ENST00000478336 SENP3-EIF4A1A0A087X0R7 540 aa31.31■■■□□ 2.6
ARF1-208ENST00000478336 ZNF853P0CG23 659 aa31.31■■■□□ 2.6
ARF1-208ENST00000478336 CALD1Q05682 793 aaKnown RBP31.31■■■□□ 2.6
ARF1-208ENST00000478336 NLGN1Q8N2Q7 840 aa31.31■■■□□ 2.6
ARF1-208ENST00000478336 NARFQ9UHQ1 456 aa31.31■■■□□ 2.6
ARF1-208ENST00000478336 LAS1LQ9Y4W2 734 aaKnown RBP31.31■■■□□ 2.6
ARF1-208ENST00000478336 FHDC1Q9C0D6 1143 aaPredicted RBP31.3■■■□□ 2.6
ARF1-208ENST00000478336 IFT57Q9NWB7 429 aa31.29■■■□□ 2.6
ARF1-208ENST00000478336 SCN7AQ01118 1682 aa31.29■■■□□ 2.6
ARF1-208ENST00000478336 A0A087WZG4 1122 aa31.28■■■□□ 2.6
ARF1-208ENST00000478336 NBPF26B4DH59 902 aa31.28■■■□□ 2.6
ARF1-208ENST00000478336 PIP4K2AP48426 406 aaPredicted RBP31.28■■■□□ 2.6
ARF1-208ENST00000478336 USPL1Q5W0Q7 1092 aa31.28■■■□□ 2.6
ARF1-208ENST00000478336 NBPF10Q6P3W6 841 aaKnown RBP31.28■■■□□ 2.6
ARF1-208ENST00000478336 WWC1Q8IX03 1113 aa31.28■■■□□ 2.6
ARF1-208ENST00000478336 NBPF15Q8N660 670 aa31.28■■■□□ 2.6
ARF1-208ENST00000478336 ZPR1O75312 459 aa31.27■■■□□ 2.6
ARF1-208ENST00000478336 MMP10P09238 476 aa31.26■■■□□ 2.59
ARF1-208ENST00000478336 GNAI1P63096 354 aa31.26■■■□□ 2.59
ARF1-208ENST00000478336 FKBP8Q14318 412 aa31.26■■■□□ 2.59
ARF1-208ENST00000478336 SYT17Q9BSW7 474 aa31.26■■■□□ 2.59
ARF1-208ENST00000478336 MBIPQ9NS73 344 aa31.26■■■□□ 2.59
ARF1-208ENST00000478336 BCL2L12Q9HB09 334 aa31.25■■■□□ 2.59
ARF1-208ENST00000478336 ZNF330Q9Y3S2 320 aaPredicted RBP31.25■■■□□ 2.59
ARF1-208ENST00000478336 BCORQ6W2J9 1755 aa31.24■■■□□ 2.59
ARF1-208ENST00000478336 KRT24Q2M2I5 525 aa31.23■■■□□ 2.59
ARF1-208ENST00000478336 ERBB4Q15303 1308 aa31.22■■■□□ 2.59
ARF1-208ENST00000478336 NPM2Q86SE8 214 aaKnown RBP31.21■■■□□ 2.59
ARF1-208ENST00000478336 TBC1D2BQ9UPU7 963 aa31.21■■■□□ 2.59
ARF1-208ENST00000478336 HOXB7P09629 217 aa31.19■■■□□ 2.58
ARF1-208ENST00000478336 DZIP3Q86Y13 1208 aaKnown RBP31.19■■■□□ 2.58
ARF1-208ENST00000478336 KLHL34Q8N239 644 aa31.19■■■□□ 2.58
ARF1-208ENST00000478336 NGEFQ8N5V2 710 aa31.19■■■□□ 2.58
ARF1-208ENST00000478336 IL16Q14005 1332 aa31.19■■■□□ 2.58
ARF1-208ENST00000478336 CAMTA2O94983 1202 aa31.18■■■□□ 2.58
ARF1-208ENST00000478336 TM4SF1P30408 202 aa31.18■■■□□ 2.58
ARF1-208ENST00000478336 DDR1Q08345 913 aa31.18■■■□□ 2.58
ARF1-208ENST00000478336 MIER1Q8N108 512 aa31.18■■■□□ 2.58
ARF1-208ENST00000478336 SALL2Q9Y467 1007 aaPredicted RBP31.18■■■□□ 2.58
ARF1-208ENST00000478336 CD2APQ9Y5K6 639 aa31.17■■■□□ 2.58
ARF1-208ENST00000478336 KIF13BQ9NQT8 1826 aa31.17■■■□□ 2.58
ARF1-208ENST00000478336 EIF2S2P20042 333 aaKnown RBP31.16■■■□□ 2.58
ARF1-208ENST00000478336 PARP3Q9Y6F1 533 aa31.16■■■□□ 2.58
ARF1-208ENST00000478336 NFIXQ14938 502 aa31.15■■■□□ 2.58
ARF1-208ENST00000478336 PDIA6Q15084 440 aa31.15■■■□□ 2.58
ARF1-208ENST00000478336 WDR63Q8IWG1 891 aa31.15■■■□□ 2.58
ARF1-208ENST00000478336 C10orf71Q711Q0 1435 aa31.15■■■□□ 2.58
ARF1-208ENST00000478336 POLRMTO00411 1230 aaKnown RBP31.14■■■□□ 2.58
ARF1-208ENST00000478336 DUSP27Q5VZP5 1158 aa31.14■■■□□ 2.58
ARF1-208ENST00000478336 NRXN2Q9P2S2 1712 aa31.13■■■□□ 2.57
ARF1-208ENST00000478336 LRP10Q7Z4F1 713 aa31.13■■■□□ 2.57
ARF1-208ENST00000478336 NLGN2Q8NFZ4 835 aa31.13■■■□□ 2.57
ARF1-208ENST00000478336 RGL2O15211 777 aa31.12■■■□□ 2.57
ARF1-208ENST00000478336 MYL6BP14649 208 aa31.12■■■□□ 2.57
ARF1-208ENST00000478336 TSR2Q969E8 191 aaKnown RBP31.12■■■□□ 2.57
ARF1-208ENST00000478336 AFDNP55196 1824 aaKnown RBP31.12■■■□□ 2.57
ARF1-208ENST00000478336 PROSER3Q2NL68 480 aa31.1■■■□□ 2.57
ARF1-208ENST00000478336 HDGFL1Q5TGJ6 251 aa31.1■■■□□ 2.57
ARF1-208ENST00000478336 TBC1D9BQ66K14 1250 aa31.1■■■□□ 2.57
ARF1-208ENST00000478336 NECTIN2Q92692 538 aa31.1■■■□□ 2.57
ARF1-208ENST00000478336 ZNF521Q96K83 1311 aa31.09■■■□□ 2.57
ARF1-208ENST00000478336 CLEC4GQ6UXB4 293 aa31.09■■■□□ 2.57
ARF1-208ENST00000478336 C8orf58Q8NAV2 365 aa31.09■■■□□ 2.57
ARF1-208ENST00000478336 KIAA1551Q9HCM1 1747 aa31.09■■■□□ 2.57
ARF1-208ENST00000478336 ANXA1P04083 346 aa31.07■■■□□ 2.56
ARF1-208ENST00000478336 TTLL7Q6ZT98 887 aa31.07■■■□□ 2.56
ARF1-208ENST00000478336 DDX21Q9NR30 783 aaKnown RBP eCLIP31.07■■■□□ 2.56
ARF1-208ENST00000478336 ZNF652Q9Y2D9 606 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms