RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 MYL6BP14649 208 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 TAF7Q15545 349 aaPredicted RBP11.78□□□□□ -0.52
CMC1-209ENST00000477739 MPRIPQ6WCQ1 1025 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 FLT4P35916 1363 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 USP6P35125 1406 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 MAP2P11137 1827 aaKnown RBP11.78□□□□□ -0.52
CMC1-209ENST00000477739 CCT4P50991 539 aaKnown RBP11.78□□□□□ -0.52
CMC1-209ENST00000477739 PRPF40BQ6NWY9 871 aaKnown RBP11.78□□□□□ -0.52
CMC1-209ENST00000477739 DDX11Q96FC9 970 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 CCDC85AQ96PX6 553 aaPredicted RBP11.78□□□□□ -0.52
CMC1-209ENST00000477739 LRRC2Q9BYS8 371 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 TSPY26PQ9H489 355 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 PIK3R4Q99570 1358 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
CMC1-209ENST00000477739 JAKMIP1Q96N16 626 aaKnown RBP11.78□□□□□ -0.52
CMC1-209ENST00000477739 SPDYE4A6NLX3 237 aa11.77□□□□□ -0.52
CMC1-209ENST00000477739 PTCH1Q13635 1447 aa11.77□□□□□ -0.52
CMC1-209ENST00000477739 TEFQ10587 303 aa11.77□□□□□ -0.53
CMC1-209ENST00000477739 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.53
CMC1-209ENST00000477739 USP48Q86UV5 1035 aa11.77□□□□□ -0.53
CMC1-209ENST00000477739 PLEKHG1Q9ULL1 1385 aa11.77□□□□□ -0.53
CMC1-209ENST00000477739 PPP1R42Q7Z4L9 355 aa11.77□□□□□ -0.53
CMC1-209ENST00000477739 CBX1P83916 185 aa11.76□□□□□ -0.53
CMC1-209ENST00000477739 RAB11FIP4Q86YS3 637 aa11.76□□□□□ -0.53
CMC1-209ENST00000477739 A0A087WWV3 80 aa11.76□□□□□ -0.53
CMC1-209ENST00000477739 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.76□□□□□ -0.53
CMC1-209ENST00000477739 ADAMTS13Q76LX8 1427 aa11.76□□□□□ -0.53
CMC1-209ENST00000477739 IL25Q9H293 177 aa11.76□□□□□ -0.53
CMC1-209ENST00000477739 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
CMC1-209ENST00000477739 PHF8Q9UPP1 1060 aa11.76□□□□□ -0.53
CMC1-209ENST00000477739 PI4KAP2A4QPH2 592 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 GNAI3P08754 354 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 IFIT2P09913 472 aaKnown RBP11.75□□□□□ -0.53
CMC1-209ENST00000477739 PI4KAP1Q8N8J0 262 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 KIF20BQ96Q89 1820 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 KCNQ3O43525 872 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 HOXC9P31274 260 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 FMNL2Q96PY5 1086 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 SBNO1A3KN83 1393 aa11.75□□□□□ -0.53
CMC1-209ENST00000477739 LRRC59Q96AG4 307 aaKnown RBP11.75□□□□□ -0.53
CMC1-209ENST00000477739 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
CMC1-209ENST00000477739 DNAJC2Q99543 621 aaKnown RBP11.75□□□□□ -0.53
CMC1-209ENST00000477739 A0A0U1RQG5 324 aaPredicted RBP11.74□□□□□ -0.53
CMC1-209ENST00000477739 BICD2Q8TD16 824 aa11.74□□□□□ -0.53
CMC1-209ENST00000477739 SYAP1Q96A49 352 aaPredicted RBP11.74□□□□□ -0.53
CMC1-209ENST00000477739 ESYT1Q9BSJ8 1104 aa11.74□□□□□ -0.53
CMC1-209ENST00000477739 NBPF7P0C2Y1 421 aaPredicted RBP11.74□□□□□ -0.53
CMC1-209ENST00000477739 DNM1Q05193 864 aaKnown RBP11.74□□□□□ -0.53
CMC1-209ENST00000477739 CWF19L2Q2TBE0 894 aaKnown RBP11.74□□□□□ -0.53
CMC1-209ENST00000477739 ZDHHC9Q9Y397 364 aa11.74□□□□□ -0.53
CMC1-209ENST00000477739 ANKLE2Q86XL3 938 aa11.74□□□□□ -0.53
CMC1-209ENST00000477739 ERCC4Q92889 916 aaPredicted RBP11.74□□□□□ -0.53
CMC1-209ENST00000477739 RTL1A6NKG5 1358 aa11.73□□□□□ -0.53
CMC1-209ENST00000477739 AACSQ86V21 672 aa11.73□□□□□ -0.53
CMC1-209ENST00000477739 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
CMC1-209ENST00000477739 ADCY5O95622 1261 aa11.73□□□□□ -0.53
CMC1-209ENST00000477739 TECPR2O15040 1411 aa11.73□□□□□ -0.53
CMC1-209ENST00000477739 KIAA0232Q92628 1395 aa11.72□□□□□ -0.53
CMC1-209ENST00000477739 RRP9O43818 475 aaKnown RBP11.72□□□□□ -0.53
CMC1-209ENST00000477739 ZNF530Q6P9A1 599 aaPredicted RBP11.72□□□□□ -0.53
CMC1-209ENST00000477739 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
CMC1-209ENST00000477739 CSB-PGBD3P0DP91 1061 aa11.72□□□□□ -0.53
CMC1-209ENST00000477739 C1orf141Q5JVX7 400 aa11.72□□□□□ -0.53
CMC1-209ENST00000477739 FSD1Q9BTV5 496 aa11.72□□□□□ -0.53
CMC1-209ENST00000477739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.72□□□□□ -0.53
CMC1-209ENST00000477739 PTMSP20962 102 aa11.72□□□□□ -0.53
CMC1-209ENST00000477739 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
CMC1-209ENST00000477739 CHMP4CQ96CF2 233 aa11.72□□□□□ -0.53
CMC1-209ENST00000477739 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.72□□□□□ -0.53
CMC1-209ENST00000477739 V9GYY5 206 aaPredicted RBP11.72□□□□□ -0.53
CMC1-209ENST00000477739 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 PTPRUQ92729 1446 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 CHMLP26374 656 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 SRCIN1Q9C0H9 1055 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 LGR6Q9HBX8 967 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 ANKRD26Q9UPS8 1709 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 AK2P54819 239 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 SLC39A6Q13433 755 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 RASEFQ8IZ41 740 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 NEUROD6Q96NK8 337 aa11.71□□□□□ -0.53
CMC1-209ENST00000477739 OVOS2A0A0J9YW53 1432 aa11.71□□□□□ -0.54
CMC1-209ENST00000477739 OVOS2Q6IE36 1432 aa11.71□□□□□ -0.54
CMC1-209ENST00000477739 PRAMEF22A3QJZ6 481 aa11.71□□□□□ -0.54
CMC1-209ENST00000477739 ZC3H6P61129 1189 aaKnown RBP11.71□□□□□ -0.54
CMC1-209ENST00000477739 LRSAM1Q6UWE0 723 aa11.71□□□□□ -0.54
CMC1-209ENST00000477739 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
CMC1-209ENST00000477739 GJB2P29033 226 aa11.7□□□□□ -0.54
CMC1-209ENST00000477739 LARP1BQ659C4 914 aaKnown RBP11.7□□□□□ -0.54
CMC1-209ENST00000477739 CHST3Q7LGC8 479 aa11.7□□□□□ -0.54
CMC1-209ENST00000477739 CCDC39Q9UFE4 941 aa11.7□□□□□ -0.54
CMC1-209ENST00000477739 CHGBP05060 677 aa11.7□□□□□ -0.54
CMC1-209ENST00000477739 ISM2Q6H9L7 571 aa11.7□□□□□ -0.54
CMC1-209ENST00000477739 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
CMC1-209ENST00000477739 C16orf45Q96MC5 204 aaPredicted RBP11.7□□□□□ -0.54
CMC1-209ENST00000477739 CWC22Q9HCG8 908 aaKnown RBP11.7□□□□□ -0.54
CMC1-209ENST00000477739 BTBD11A6QL63 1104 aa11.69□□□□□ -0.54
CMC1-209ENST00000477739 H3BQV1 296 aa11.69□□□□□ -0.54
CMC1-209ENST00000477739 LARGE1O95461 756 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms